Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group6_versus_Group8.HSC_Pheno.cls#Group6_versus_Group8_repos
Phenotype	HSC_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.18278246
Normalized Enrichment Score (NES)	-0.83125967
Nominal p-value	0.8686636
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Irs2	423	0.635	-0.0151	No
2	Dennd5a	578	0.586	-0.0098	No
3	Pfkfb3	893	0.516	-0.0196	No
4	Cd44	900	0.515	-0.0043	No
5	Rcan1	954	0.503	0.0067	No
6	Slc16a6	983	0.497	0.0197	No
7	Bhlhe40	1031	0.488	0.0308	No
8	Btg3	1091	0.478	0.0406	No
9	Pdlim5	1159	0.468	0.0495	No
10	Kynu	1548	0.406	0.0302	No
11	Gpr183	1596	0.400	0.0386	No
12	Dram1	1666	0.392	0.0450	No
13	Yrdc	1668	0.392	0.0569	No
14	Per1	1785	0.378	0.0590	No
15	Tlr2	2028	0.350	0.0499	No
16	Csf1	2076	0.344	0.0566	No
17	Klf4	2083	0.343	0.0666	No
18	Icosl	2142	0.339	0.0723	No
19	Cflar	2193	0.334	0.0784	No
20	Stat5a	2261	0.326	0.0829	No
21	Smad3	2266	0.326	0.0926	No
22	Gem	2353	0.319	0.0953	No
23	Bcl6	2367	0.316	0.1039	No
24	Pnrc1	2543	0.298	0.0988	No
25	Sod2	2602	0.293	0.1030	No
26	Ifih1	2621	0.290	0.1104	No
27	Nfkbie	2804	0.273	0.1039	No
28	Mcl1	2925	0.261	0.1021	No
29	Plpp3	3086	0.250	0.0966	No
30	Dusp4	3162	0.242	0.0979	No
31	Gfpt2	3189	0.240	0.1031	No
32	Ccnl1	3451	0.218	0.0885	No
33	Egr1	3492	0.214	0.0918	No
34	Jag1	3576	0.207	0.0913	No
35	Rela	3596	0.205	0.0960	No
36	Lamb3	3812	0.187	0.0842	No
37	Ehd1	3854	0.184	0.0865	No
38	Panx1	3855	0.184	0.0921	No
39	Rigi	3869	0.182	0.0966	No
40	Plek	3911	0.179	0.0988	No
41	Nr4a2	4008	0.170	0.0961	No
42	Klf2	4354	0.145	0.0723	No
43	Ptpre	4357	0.144	0.0766	No
44	Tap1	4369	0.143	0.0801	No
45	Il18	4450	0.137	0.0777	No
46	Rel	4462	0.135	0.0810	No
47	Tank	4506	0.132	0.0815	No
48	Trip10	4602	0.124	0.0776	No
49	Jun	4681	0.118	0.0748	No
50	Vegfa	4716	0.116	0.0756	No
51	Ptger4	4727	0.114	0.0783	No
52	Rhob	4755	0.112	0.0795	No
53	Dnajb4	4921	0.101	0.0691	No
54	Nfkb1	4952	0.098	0.0696	No
55	Fosb	5002	0.094	0.0685	No
56	Relb	5033	0.091	0.0688	No
57	Efna1	5050	0.090	0.0703	No
58	Ier3	5122	0.086	0.0671	No
59	Pmepa1	5202	0.080	0.0631	No
60	Myc	5245	0.078	0.0620	No
61	Fut4	5255	0.077	0.0636	No
62	Gch1	5330	0.070	0.0598	No
63	Atp2b1	5370	0.067	0.0586	No
64	Tgif1	5384	0.066	0.0596	No
65	Klf6	5408	0.064	0.0597	No
66	Ninj1	5437	0.062	0.0593	No
67	Hbegf	5571	0.052	0.0500	No
68	Mxd1	5634	0.046	0.0463	No
69	Tnip2	5740	0.039	0.0389	No
70	Ets2	5872	0.029	0.0291	No
71	Icam1	5910	0.026	0.0269	No
72	Rnf19b	5949	0.024	0.0245	No
73	Nampt	6016	0.019	0.0197	No
74	Ier2	6108	0.010	0.0125	No
75	Clcf1	6193	0.004	0.0058	No
76	Zfp36	6223	0.002	0.0035	No
77	Cebpd	6237	0.002	0.0025	No
78	Nr4a1	6371	-0.002	-0.0083	No
79	Dusp1	6476	-0.009	-0.0166	No
80	Birc3	6487	-0.010	-0.0171	No
81	Plaur	6504	-0.011	-0.0180	No
82	Dusp5	6550	-0.014	-0.0213	No
83	Il15ra	6748	-0.027	-0.0366	No
84	Zc3h12a	6788	-0.031	-0.0388	No
85	Traf1	7014	-0.048	-0.0557	No
86	Irf1	7030	-0.049	-0.0554	No
87	Tiparp	7219	-0.064	-0.0689	No
88	Trib1	7367	-0.074	-0.0786	No
89	Klf9	7603	-0.090	-0.0951	No
90	Nfkbia	7734	-0.098	-0.1027	No
91	Bcl3	7750	-0.100	-0.1009	No
92	Junb	7788	-0.102	-0.1008	No
93	Gadd45b	7940	-0.116	-0.1096	No
94	Btg1	8115	-0.131	-0.1198	No
95	Tsc22d1	8137	-0.132	-0.1175	No
96	Tnfaip3	8144	-0.132	-0.1139	No
97	Kdm6b	8339	-0.146	-0.1253	No
98	Klf10	8396	-0.151	-0.1252	No
99	Nfat5	8553	-0.162	-0.1330	No
100	Slc2a3	8673	-0.172	-0.1375	No
101	Fos	8712	-0.174	-0.1353	No
102	Ripk2	8737	-0.176	-0.1318	No
103	Ldlr	8805	-0.183	-0.1317	No
104	Inhba	8852	-0.187	-0.1297	No
105	Tnip1	8891	-0.191	-0.1270	No
106	Birc2	8983	-0.199	-0.1283	No
107	Litaf	9121	-0.212	-0.1330	No
108	Sdc4	9122	-0.212	-0.1265	No
109	Sqstm1	9431	-0.239	-0.1444	No
110	Ppp1r15a	9450	-0.241	-0.1385	No
111	Tnfaip2	9492	-0.246	-0.1343	No
112	Ifngr2	9515	-0.248	-0.1285	No
113	Zbtb10	9827	-0.270	-0.1457	No
114	Nfe2l2	9899	-0.276	-0.1430	No
115	Serpinb8	10386	-0.321	-0.1729	Yes
116	Abca1	10415	-0.323	-0.1653	Yes
117	Tnfaip8	10432	-0.325	-0.1567	Yes
118	Plk2	10521	-0.336	-0.1536	Yes
119	Il6st	10684	-0.353	-0.1560	Yes
120	B4galt1	10714	-0.356	-0.1475	Yes
121	Map3k8	10924	-0.384	-0.1528	Yes
122	Fosl2	10974	-0.391	-0.1448	Yes
123	Ccnd1	10980	-0.392	-0.1332	Yes
124	Sat1	11013	-0.394	-0.1238	Yes
125	Dusp2	11062	-0.400	-0.1154	Yes
126	Nfkb2	11089	-0.403	-0.1052	Yes
127	Marcks	11136	-0.411	-0.0964	Yes
128	Eif1	11435	-0.470	-0.1063	Yes
129	Maff	11677	-0.515	-0.1102	Yes
130	Socs3	11693	-0.521	-0.0955	Yes
131	B4galt5	11872	-0.574	-0.0925	Yes
132	Ier5	11957	-0.602	-0.0809	Yes
133	Ifit2	12024	-0.623	-0.0672	Yes
134	Snn	12119	-0.683	-0.0539	Yes
135	Map2k3	12142	-0.699	-0.0343	Yes
136	Ccrl2	12152	-0.705	-0.0134	Yes
137	Pde4b	12325	-0.999	0.0031	Yes