Details for gene set HALLMARK_G2M

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group6_versus_Group8.HSC_Pheno.cls#Group6_versus_Group8_repos
Phenotype	HSC_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)	-0.36319965
Normalized Enrichment Score (NES)	-1.250763
Nominal p-value	0.024282562
FDR q-value	0.71652377
FWER p-Value	0.826

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Upf1	119	0.844	0.0068	No
2	Mcm5	146	0.814	0.0206	No
3	Gspt1	210	0.755	0.0302	No
4	Slc7a5	749	0.545	-0.0033	No
5	Ube2s	800	0.532	0.0031	No
6	H2az1	823	0.529	0.0116	No
7	Slc7a1	895	0.516	0.0159	No
8	Snrpd1	1113	0.474	0.0074	No
9	Nolc1	1266	0.448	0.0037	No
10	Chaf1a	1268	0.448	0.0124	No
11	Traip	1489	0.414	0.0024	No
12	Ewsr1	1528	0.409	0.0073	No
13	Srsf2	1684	0.390	0.0022	No
14	Kmt5a	1686	0.390	0.0098	No
15	Tra2b	1702	0.389	0.0162	No
16	Mcm3	1796	0.376	0.0159	No
17	Chek1	1833	0.370	0.0202	No
18	Odc1	1975	0.355	0.0156	No
19	Tent4a	2016	0.351	0.0192	No
20	Dr1	2033	0.350	0.0247	No
21	Pml	2264	0.326	0.0122	No
22	Smad3	2266	0.326	0.0185	No
23	Srsf1	2325	0.321	0.0201	No
24	Dmd	2338	0.320	0.0253	No
25	Sqle	2520	0.300	0.0164	No
26	Meis2	2663	0.286	0.0103	No
27	Polq	2741	0.278	0.0095	No
28	Katna1	2802	0.273	0.0099	No
29	Hira	3297	0.229	-0.0262	No
30	Mnat1	3355	0.223	-0.0265	No
31	Atf5	3394	0.221	-0.0253	No
32	Lig3	3428	0.220	-0.0237	No
33	Stil	3577	0.207	-0.0318	No
34	Mapk14	3738	0.194	-0.0411	No
35	Tacc3	3955	0.175	-0.0554	No
36	Ilf3	4003	0.171	-0.0559	No
37	Ythdc1	4009	0.170	-0.0530	No
38	Odf2	4054	0.166	-0.0534	No
39	Smc1a	4076	0.164	-0.0519	No
40	Mcm6	4288	0.150	-0.0662	No
41	Lbr	4340	0.146	-0.0676	No
42	Map3k20	4402	0.140	-0.0698	No
43	Cul5	4518	0.131	-0.0767	No
44	E2f1	4616	0.124	-0.0822	No
45	Mtf2	4986	0.095	-0.1107	No
46	Myc	5245	0.078	-0.1303	No
47	Cul1	5253	0.077	-0.1294	No
48	Arid4a	5277	0.075	-0.1298	No
49	G3bp1	5287	0.074	-0.1291	No
50	H2az2	5295	0.073	-0.1282	No
51	Notch2	5479	0.058	-0.1421	No
52	Uck2	5493	0.058	-0.1420	No
53	Foxn3	5560	0.053	-0.1464	No
54	Wrn	5606	0.049	-0.1492	No
55	Kif5b	5652	0.046	-0.1520	No
56	Slc12a2	5672	0.044	-0.1527	No
57	Plk4	5676	0.044	-0.1520	No
58	Ss18	5691	0.042	-0.1524	No
59	Ttk	5706	0.041	-0.1527	No
60	Sfpq	5741	0.038	-0.1548	No
61	Lmnb1	5780	0.035	-0.1572	No
62	Casp8ap2	6082	0.013	-0.1816	No
63	Bard1	6086	0.012	-0.1816	No
64	Ncl	6096	0.012	-0.1822	No
65	Xpo1	6098	0.011	-0.1820	No
66	Rpa2	6102	0.011	-0.1821	No
67	Kpnb1	6124	0.009	-0.1836	No
68	Mybl2	6141	0.007	-0.1848	No
69	Orc6	6231	0.002	-0.1920	No
70	Birc5	6270	0.000	-0.1952	No
71	Meis1	6355	-0.001	-0.2020	No
72	Mcm2	6448	-0.008	-0.2094	No
73	H2ax	6571	-0.015	-0.2192	No
74	Cdc6	6752	-0.028	-0.2334	No
75	Suv39h1	6817	-0.033	-0.2380	No
76	Atrx	6860	-0.037	-0.2407	No
77	Sap30	6950	-0.043	-0.2472	No
78	E2f3	6981	-0.046	-0.2487	No
79	Rad23b	7059	-0.052	-0.2540	No
80	Cenpa	7062	-0.052	-0.2532	No
81	Hnrnpd	7095	-0.054	-0.2548	No
82	Hmgb3	7122	-0.057	-0.2558	No
83	Pura	7139	-0.058	-0.2560	No
84	Brca2	7265	-0.067	-0.2649	No
85	Cbx1	7502	-0.084	-0.2826	No
86	Tnpo2	7539	-0.086	-0.2839	No
87	Pds5b	7565	-0.087	-0.2843	No
88	Ccnb2	7609	-0.090	-0.2860	No
89	Stmn1	7655	-0.093	-0.2879	No
90	Hus1	7665	-0.093	-0.2868	No
91	Kif11	7690	-0.095	-0.2869	No
92	Bcl3	7750	-0.100	-0.2898	No
93	Prmt5	7833	-0.106	-0.2944	No
94	Dkc1	7900	-0.112	-0.2977	No
95	Prpf4b	8131	-0.132	-0.3140	No
96	Smc4	8266	-0.141	-0.3222	No
97	Hif1a	8313	-0.144	-0.3232	No
98	Ndc80	8380	-0.149	-0.3257	No
99	Amd1	8409	-0.152	-0.3250	No
100	Rbl1	8561	-0.163	-0.3342	No
101	Pafah1b1	8604	-0.167	-0.3344	No
102	Bub1	8734	-0.176	-0.3415	No
103	Nasp	8787	-0.182	-0.3422	No
104	Mki67	8838	-0.186	-0.3427	No
105	Tmpo	8865	-0.188	-0.3411	No
106	Smarcc1	8903	-0.192	-0.3404	No
107	Mad2l1	8929	-0.194	-0.3386	No
108	Tfdp1	8967	-0.197	-0.3378	No
109	Abl1	8982	-0.199	-0.3351	No
110	Ccnt1	8993	-0.200	-0.3320	No
111	Chmp1a	9058	-0.205	-0.3332	No
112	Dtymk	9087	-0.208	-0.3314	No
113	Fancc	9130	-0.213	-0.3307	No
114	Aurka	9180	-0.217	-0.3305	No
115	Egf	9199	-0.217	-0.3277	No
116	Top2a	9408	-0.237	-0.3401	No
117	Nsd2	9623	-0.254	-0.3527	No
118	Orc5	9650	-0.256	-0.3498	No
119	Rad54l	9657	-0.257	-0.3453	No
120	Kif15	9794	-0.268	-0.3512	No
121	Tle3	9844	-0.272	-0.3499	No
122	Slc38a1	10007	-0.286	-0.3576	Yes
123	Cul3	10018	-0.286	-0.3528	Yes
124	E2f2	10058	-0.288	-0.3504	Yes
125	Nusap1	10091	-0.291	-0.3473	Yes
126	Nup50	10114	-0.294	-0.3434	Yes
127	Smc2	10163	-0.297	-0.3415	Yes
128	Pola2	10254	-0.307	-0.3428	Yes
129	Gins2	10407	-0.322	-0.3490	Yes
130	Pttg1	10440	-0.326	-0.3452	Yes
131	Srsf10	10485	-0.332	-0.3424	Yes
132	Cenpf	10502	-0.335	-0.3371	Yes
133	Incenp	10539	-0.338	-0.3334	Yes
134	Stag1	10560	-0.340	-0.3284	Yes
135	Jpt1	10568	-0.342	-0.3223	Yes
136	Ccna2	10677	-0.353	-0.3242	Yes
137	Tpx2	10682	-0.353	-0.3176	Yes
138	Ezh2	10690	-0.354	-0.3113	Yes
139	Cdc20	10706	-0.355	-0.3056	Yes
140	Cdkn2c	10707	-0.355	-0.2986	Yes
141	Prc1	10795	-0.367	-0.2985	Yes
142	E2f4	10842	-0.374	-0.2950	Yes
143	Rad21	10858	-0.375	-0.2889	Yes
144	Cks2	10907	-0.382	-0.2854	Yes
145	Cdc25a	10917	-0.383	-0.2786	Yes
146	Cdk1	10963	-0.390	-0.2746	Yes
147	Ccnd1	10980	-0.392	-0.2683	Yes
148	Ctcf	10983	-0.392	-0.2608	Yes
149	Cenpe	11053	-0.399	-0.2586	Yes
150	Cul4a	11056	-0.400	-0.2509	Yes
151	Prim2	11093	-0.404	-0.2460	Yes
152	Marcks	11136	-0.411	-0.2414	Yes
153	Kif20b	11209	-0.424	-0.2390	Yes
154	Ube2c	11221	-0.426	-0.2315	Yes
155	Cdc45	11372	-0.457	-0.2349	Yes
156	Exo1	11389	-0.460	-0.2272	Yes
157	Nup98	11401	-0.464	-0.2190	Yes
158	Bub3	11415	-0.467	-0.2109	Yes
159	Dbf4	11570	-0.494	-0.2139	Yes
160	Pole	11613	-0.502	-0.2075	Yes
161	Cdc7	11652	-0.508	-0.2007	Yes
162	Fbxo5	11657	-0.510	-0.1910	Yes
163	Hspa8	11663	-0.512	-0.1814	Yes
164	Racgap1	11801	-0.551	-0.1818	Yes
165	Hnrnpu	11806	-0.553	-0.1713	Yes
166	Cdkn1b	11845	-0.564	-0.1634	Yes
167	Kif4	11849	-0.566	-0.1526	Yes
168	Cdc27	11850	-0.567	-0.1414	Yes
169	Top1	11855	-0.569	-0.1306	Yes
170	Rasal2	11858	-0.570	-0.1196	Yes
171	Ddx39a	11964	-0.604	-0.1164	Yes
172	Numa1	11975	-0.609	-0.1053	Yes
173	Cdc25b	11976	-0.609	-0.0934	Yes
174	Ccnf	12005	-0.616	-0.0836	Yes
175	Rps6ka5	12096	-0.669	-0.0779	Yes
176	Hmmr	12133	-0.694	-0.0672	Yes
177	Kif23	12194	-0.735	-0.0578	Yes
178	Knl1	12271	-0.830	-0.0477	Yes
179	Tgfb1	12274	-0.840	-0.0314	Yes
180	Cdk4	12313	-0.945	-0.0160	Yes
181	Syncrip	12329	-1.024	0.0028	Yes