Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group6_versus_Group8.HSC_Pheno.cls#Group6_versus_Group8_repos
Phenotype	HSC_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.22580096
Normalized Enrichment Score (NES)	-1.0632248
Nominal p-value	0.31455398
FDR q-value	1.0
FWER p-Value	0.995

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Lap3	27	1.065	0.0296	No
2	Dusp6	74	0.920	0.0534	No
3	Gnb2	135	0.826	0.0731	No
4	Grb2	450	0.624	0.0661	No
5	Gnai2	495	0.609	0.0808	No
6	Dock9	573	0.588	0.0920	No
7	Cblb	575	0.587	0.1095	No
8	Itgam	687	0.558	0.1171	No
9	Fyn	838	0.527	0.1206	No
10	Lck	1041	0.487	0.1187	No
11	Cd46	1262	0.448	0.1141	No
12	Atox1	1472	0.417	0.1095	No
13	Kynu	1548	0.406	0.1155	No
14	Ctss	1583	0.401	0.1248	No
15	Gng2	1751	0.382	0.1225	No
16	Csrp1	1771	0.380	0.1323	No
17	Lyn	1983	0.354	0.1257	No
18	Dgkg	2191	0.334	0.1188	No
19	F5	2298	0.323	0.1198	No
20	Hspa5	2319	0.322	0.1278	No
21	Col4a2	2337	0.320	0.1359	No
22	Usp15	2474	0.305	0.1340	No
23	Adam9	2687	0.284	0.1251	No
24	Pclo	2712	0.281	0.1316	No
25	Lta4h	2779	0.275	0.1344	No
26	Pdp1	2947	0.259	0.1285	No
27	Dyrk2	3088	0.250	0.1245	No
28	Casp4	3176	0.241	0.1246	No
29	Cpq	3178	0.241	0.1317	No
30	Prss36	3440	0.219	0.1170	No
31	Spock2	3556	0.208	0.1138	No
32	Gca	3669	0.201	0.1107	No
33	Kif2a	3676	0.200	0.1162	No
34	S100a13	3814	0.187	0.1106	No
35	Ehd1	3854	0.184	0.1129	No
36	Xpnpep1	3882	0.182	0.1161	No
37	Plek	3911	0.179	0.1192	No
38	Msrb1	3921	0.178	0.1238	No
39	Plscr1	3962	0.174	0.1257	No
40	Rhog	4017	0.169	0.1264	No
41	Akap10	4097	0.163	0.1248	No
42	Dock10	4308	0.148	0.1121	No
43	Psmb9	4418	0.139	0.1073	No
44	Gnai3	4543	0.129	0.1010	No
45	Zeb1	4646	0.121	0.0963	No
46	Pla2g4a	4759	0.112	0.0905	No
47	Lrp1	4782	0.110	0.0920	No
48	Ctsl	4839	0.106	0.0906	No
49	Gpd2	4848	0.105	0.0931	No
50	Brpf3	4871	0.104	0.0944	No
51	Prep	4939	0.100	0.0919	No
52	Raf1	4957	0.098	0.0935	No
53	Lipa	5018	0.092	0.0913	No
54	Stx4a	5048	0.090	0.0916	No
55	Calm3	5073	0.088	0.0923	No
56	Timp2	5426	0.063	0.0654	No
57	Pim1	5494	0.058	0.0617	No
58	Me1	5702	0.041	0.0460	No
59	Casp7	6188	0.004	0.0065	No
60	Casp3	6192	0.004	0.0064	No
61	Dock4	6359	-0.001	-0.0071	No
62	Ppp2cb	6389	-0.003	-0.0094	No
63	Mmp14	6466	-0.009	-0.0153	No
64	Plaur	6504	-0.011	-0.0180	No
65	Dusp5	6550	-0.014	-0.0213	No
66	Usp16	6631	-0.020	-0.0272	No
67	C2	6636	-0.020	-0.0269	No
68	Rce1	6738	-0.027	-0.0344	No
69	Lamp2	6888	-0.038	-0.0454	No
70	Sirt6	7015	-0.048	-0.0542	No
71	Irf1	7030	-0.049	-0.0539	No
72	Fdx1	7217	-0.064	-0.0672	No
73	Prkcd	7433	-0.078	-0.0824	No
74	Ctsh	7504	-0.084	-0.0856	No
75	Ctsc	7519	-0.084	-0.0842	No
76	Psen1	7540	-0.086	-0.0833	No
77	Anxa5	7738	-0.099	-0.0964	No
78	Was	7795	-0.103	-0.0979	No
79	Irf2	7859	-0.108	-0.0999	No
80	Rbsn	7919	-0.114	-0.1013	No
81	Sh2b3	7982	-0.119	-0.1028	No
82	Ctso	7986	-0.119	-0.0995	No
83	Gata3	8110	-0.130	-0.1056	No
84	Tnfaip3	8144	-0.132	-0.1044	No
85	Casp9	8607	-0.167	-0.1371	No
86	Gnb4	8875	-0.189	-0.1533	No
87	Usp8	8911	-0.192	-0.1504	No
88	Dgkh	9052	-0.205	-0.1557	No
89	Clu	9449	-0.241	-0.1808	No
90	F8	9798	-0.268	-0.2012	No
91	Dpp4	9933	-0.279	-0.2038	No
92	Rabif	10203	-0.301	-0.2168	Yes
93	Kcnip3	10230	-0.304	-0.2098	Yes
94	Pik3cg	10242	-0.306	-0.2016	Yes
95	Car2	10356	-0.318	-0.2013	Yes
96	Ctsd	10366	-0.319	-0.1925	Yes
97	Ctsb	10413	-0.322	-0.1867	Yes
98	S100a9	10456	-0.328	-0.1803	Yes
99	Irf7	10511	-0.336	-0.1747	Yes
100	Jak2	10675	-0.353	-0.1774	Yes
101	Vcpip1	10721	-0.357	-0.1704	Yes
102	Casp1	10733	-0.359	-0.1606	Yes
103	Rnf4	10748	-0.361	-0.1510	Yes
104	Src	10785	-0.366	-0.1430	Yes
105	Prdm4	10914	-0.382	-0.1420	Yes
106	Lcp2	11098	-0.405	-0.1448	Yes
107	Gp9	11265	-0.433	-0.1454	Yes
108	Pik3r5	11375	-0.457	-0.1407	Yes
109	Prcp	11421	-0.468	-0.1304	Yes
110	Cr2	11447	-0.471	-0.1183	Yes
111	Pdgfb	11534	-0.484	-0.1109	Yes
112	Maff	11677	-0.515	-0.1071	Yes
113	Cpm	11819	-0.557	-0.1019	Yes
114	Calm1	11941	-0.595	-0.0940	Yes
115	Pfn1	12055	-0.646	-0.0839	Yes
116	Pik3ca	12147	-0.700	-0.0704	Yes
117	Ppp4c	12163	-0.711	-0.0504	Yes
118	Gmfb	12267	-0.812	-0.0345	Yes
119	Usp14	12359	-1.415	0.0003	Yes