Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group6_versus_Group8.HSC_Pheno.cls#Group6_versus_Group8_repos
Phenotype	HSC_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.23282067
Normalized Enrichment Score (NES)	-1.0565375
Nominal p-value	0.34057972
FDR q-value	1.0
FWER p-Value	0.995

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Timp3	277	0.707	0.0004	No
2	App	426	0.634	0.0089	No
3	Bcl2l11	507	0.606	0.0222	No
4	Dap3	605	0.577	0.0330	No
5	Pak1	662	0.564	0.0468	No
6	Cd44	900	0.515	0.0442	No
7	Btg3	1091	0.478	0.0443	No
8	Etf1	1178	0.464	0.0524	No
9	Bid	1318	0.441	0.0554	No
10	Erbb3	1331	0.439	0.0687	No
11	Ifngr1	1461	0.419	0.0718	No
12	Gpx1	1473	0.417	0.0845	No
13	Rock1	1570	0.402	0.0898	No
14	F2r	1603	0.399	0.1001	No
15	Xiap	1646	0.396	0.1096	No
16	Ank	1825	0.372	0.1072	No
17	Cflar	2193	0.334	0.0881	No
18	Madd	2327	0.321	0.0877	No
19	Rhot2	2547	0.298	0.0795	No
20	Sod2	2602	0.293	0.0847	No
21	Add1	2658	0.287	0.0895	No
22	Cyld	2788	0.274	0.0879	No
23	Mcl1	2925	0.261	0.0853	No
24	Tnfsf10	3137	0.245	0.0760	No
25	Casp4	3176	0.241	0.0808	No
26	Plcb2	3471	0.215	0.0638	No
27	Rela	3596	0.205	0.0604	No
28	Pea15a	3817	0.187	0.0485	No
29	Ppp3r1	3893	0.181	0.0482	No
30	Casp6	3941	0.177	0.0501	No
31	Tap1	4369	0.143	0.0199	No
32	Brca1	4372	0.143	0.0244	No
33	Il18	4450	0.137	0.0226	No
34	Fdxr	4471	0.134	0.0254	No
35	Jun	4681	0.118	0.0121	No
36	Pdgfrb	4682	0.118	0.0160	No
37	Bgn	4695	0.117	0.0188	No
38	Rhob	4755	0.112	0.0177	No
39	Ier3	5122	0.086	-0.0094	No
40	Nefh	5146	0.084	-0.0086	No
41	Gch1	5330	0.070	-0.0212	No
42	Eno2	5372	0.067	-0.0224	No
43	Lmna	5407	0.064	-0.0231	No
44	Timp2	5426	0.063	-0.0225	No
45	Ppt1	5592	0.050	-0.0343	No
46	Bax	5760	0.037	-0.0468	No
47	Bcap31	5865	0.030	-0.0543	No
48	Ptk2	6149	0.007	-0.0772	No
49	Gsn	6181	0.005	-0.0796	No
50	Casp7	6188	0.004	-0.0799	No
51	Casp3	6192	0.004	-0.0800	No
52	Sc5d	6256	0.000	-0.0852	No
53	Dnajc3	6258	0.000	-0.0852	No
54	Dpyd	6296	0.000	-0.0883	No
55	Dnm1l	6392	-0.003	-0.0959	No
56	Birc3	6487	-0.010	-0.1033	No
57	Casp2	6781	-0.030	-0.1262	No
58	Ctnnb1	6968	-0.045	-0.1399	No
59	Vdac2	7027	-0.049	-0.1431	No
60	Irf1	7030	-0.049	-0.1416	No
61	Nedd9	7129	-0.057	-0.1478	No
62	Gna15	7315	-0.070	-0.1606	No
63	Ddit3	7319	-0.070	-0.1585	No
64	Txnip	7380	-0.075	-0.1610	No
65	Igf2r	7442	-0.078	-0.1634	No
66	Psen2	7491	-0.083	-0.1647	No
67	Sod1	7535	-0.085	-0.1654	No
68	Psen1	7540	-0.086	-0.1629	No
69	Crebbp	7778	-0.102	-0.1790	No
70	Smad7	7819	-0.105	-0.1788	No
71	Gadd45b	7940	-0.116	-0.1848	No
72	Bcl10	7987	-0.119	-0.1847	No
73	Ccnd2	8111	-0.130	-0.1905	No
74	Mmp2	8252	-0.140	-0.1974	No
75	Sptan1	8355	-0.148	-0.2009	No
76	Casp9	8607	-0.167	-0.2159	No
77	Casp8	8648	-0.171	-0.2137	No
78	Tgfbr3	8757	-0.179	-0.2167	No
79	Cdk2	8956	-0.196	-0.2264	Yes
80	Rara	9009	-0.201	-0.2241	Yes
81	Dffa	9113	-0.211	-0.2256	Yes
82	Mgmt	9114	-0.211	-0.2188	Yes
83	Diablo	9136	-0.213	-0.2135	Yes
84	Bnip3l	9256	-0.223	-0.2160	Yes
85	Top2a	9408	-0.237	-0.2206	Yes
86	Sqstm1	9431	-0.239	-0.2146	Yes
87	Clu	9449	-0.241	-0.2082	Yes
88	Wee1	9460	-0.242	-0.2011	Yes
89	Tspo	9516	-0.248	-0.1976	Yes
90	Gpx3	9572	-0.252	-0.1938	Yes
91	Fas	9669	-0.258	-0.1933	Yes
92	Gsr	9674	-0.258	-0.1852	Yes
93	Satb1	9972	-0.282	-0.2003	Yes
94	Gpx4	10021	-0.287	-0.1948	Yes
95	Dnaja1	10086	-0.290	-0.1906	Yes
96	Rnasel	10187	-0.300	-0.1890	Yes
97	Bcl2l2	10314	-0.313	-0.1891	Yes
98	Isg20	10390	-0.322	-0.1848	Yes
99	Casp1	10733	-0.359	-0.2010	Yes
100	Krt18	10934	-0.386	-0.2048	Yes
101	Ccnd1	10980	-0.392	-0.1957	Yes
102	Bcl2l1	10991	-0.393	-0.1837	Yes
103	Fez1	10999	-0.393	-0.1715	Yes
104	Sat1	11013	-0.394	-0.1597	Yes
105	Hgf	11157	-0.414	-0.1579	Yes
106	Ebp	11222	-0.426	-0.1492	Yes
107	Dap	11292	-0.440	-0.1405	Yes
108	Anxa1	11390	-0.460	-0.1335	Yes
109	Pdcd4	11404	-0.465	-0.1194	Yes
110	Ifitm3	11729	-0.529	-0.1286	Yes
111	Cdkn1b	11845	-0.564	-0.1197	Yes
112	H1f0	11914	-0.589	-0.1060	Yes
113	Hmgb2	11974	-0.608	-0.0910	Yes
114	Cdc25b	11976	-0.609	-0.0713	Yes
115	Cd38	12171	-0.719	-0.0637	Yes
116	Bmf	12173	-0.720	-0.0404	Yes
117	Slc20a1	12223	-0.766	-0.0194	Yes
118	Retsat	12314	-0.945	0.0040	Yes