Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group6_versus_Group8.HSC_Pheno.cls#Group6_versus_Group8_repos
Phenotype	HSC_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	-0.17227626
Normalized Enrichment Score (NES)	-0.8170136
Nominal p-value	0.93363845
FDR q-value	0.960674
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hadh	334	0.675	-0.0068	No
2	Epb41l2	449	0.624	0.0029	No
3	Pten	451	0.623	0.0218	No
4	Gnai2	495	0.609	0.0369	No
5	Cntn1	553	0.594	0.0503	No
6	Mpzl1	674	0.561	0.0576	No
7	Col16a1	767	0.540	0.0665	No
8	Nrtn	1138	0.471	0.0506	No
9	Cadm2	1140	0.470	0.0649	No
10	Slit2	1348	0.437	0.0612	No
11	Fscn1	1369	0.433	0.0728	No
12	Fbn1	1551	0.405	0.0703	No
13	Actn1	1554	0.405	0.0825	No
14	Myh9	1719	0.387	0.0809	No
15	Gnai1	1791	0.376	0.0865	No
16	Pals1	1874	0.365	0.0910	No
17	Amigo1	1982	0.354	0.0930	No
18	Itga10	2199	0.334	0.0855	No
19	Lama3	2207	0.332	0.0950	No
20	Shroom2	2240	0.328	0.1024	No
21	Tsc1	2246	0.327	0.1120	No
22	Layn	2269	0.326	0.1201	No
23	Cnn2	2344	0.319	0.1237	No
24	Tro	2368	0.316	0.1315	No
25	Cercam	2403	0.311	0.1382	No
26	Map4k2	2518	0.301	0.1380	No
27	Adam9	2687	0.284	0.1329	No
28	Nlgn2	2860	0.266	0.1270	No
29	Pard6g	3028	0.254	0.1210	No
30	Jup	3047	0.252	0.1272	No
31	Exoc4	3240	0.234	0.1187	No
32	Gtf2f1	3282	0.230	0.1223	No
33	Pkd1	3336	0.225	0.1249	No
34	Myh10	3464	0.216	0.1211	No
35	Sdc3	3490	0.214	0.1255	No
36	Msn	3514	0.212	0.1301	No
37	Mapk14	3738	0.194	0.1178	No
38	Tubg1	3755	0.192	0.1224	No
39	Lamb3	3812	0.187	0.1235	No
40	Itga3	3839	0.185	0.1270	No
41	Plcg1	3844	0.185	0.1323	No
42	Arpc2	3883	0.182	0.1347	No
43	Cd274	3885	0.182	0.1402	No
44	Ywhah	3954	0.175	0.1400	No
45	Myl12b	4050	0.166	0.1373	No
46	Crat	4063	0.166	0.1413	No
47	Taok2	4362	0.144	0.1214	No
48	Map3k20	4402	0.140	0.1224	No
49	Ikbkg	4483	0.134	0.1200	No
50	Tmem8b	4588	0.126	0.1153	No
51	Sympk	4601	0.125	0.1181	No
52	Cdk8	4627	0.122	0.1198	No
53	Ldlrap1	4671	0.119	0.1199	No
54	Rsu1	4732	0.114	0.1185	No
55	Cd276	4761	0.112	0.1196	No
56	Sorbs3	4820	0.108	0.1181	No
57	Stx4a	5048	0.090	0.1023	No
58	Tial1	5145	0.084	0.0970	No
59	Akt3	5151	0.084	0.0992	No
60	Cd86	5156	0.083	0.1014	No
61	Icam2	5195	0.080	0.1007	No
62	Skap2	5308	0.072	0.0938	No
63	Rhof	5314	0.071	0.0955	No
64	Actb	5380	0.066	0.0922	No
65	Actg1	5543	0.053	0.0806	No
66	Arhgef6	5617	0.048	0.0761	No
67	Nf2	5868	0.029	0.0566	No
68	Icam1	5910	0.026	0.0540	No
69	Ctnna1	5977	0.022	0.0493	No
70	Ptk2	6149	0.007	0.0356	No
71	Lima1	6400	-0.004	0.0152	No
72	Sirpa	6484	-0.010	0.0088	No
73	Vasp	6572	-0.015	0.0021	No
74	Nf1	6806	-0.033	-0.0159	No
75	Tjp1	6941	-0.043	-0.0256	No
76	Traf1	7014	-0.048	-0.0300	No
77	Insig1	7182	-0.061	-0.0418	No
78	Vav2	7471	-0.081	-0.0628	No
79	Dlg1	7487	-0.082	-0.0615	No
80	Bmp1	7771	-0.101	-0.0816	No
81	Inppl1	7814	-0.105	-0.0818	No
82	Itgb1	7888	-0.110	-0.0844	No
83	Rac2	7898	-0.111	-0.0818	No
84	Adam15	7936	-0.116	-0.0813	No
85	Wasl	7991	-0.120	-0.0820	No
86	Kcnh2	8097	-0.129	-0.0867	No
87	Ptprc	8222	-0.138	-0.0926	No
88	Mmp2	8252	-0.140	-0.0907	No
89	Dhx16	8532	-0.161	-0.1086	No
90	Cap1	8594	-0.166	-0.1086	No
91	Nrap	8681	-0.173	-0.1103	No
92	Vcan	8725	-0.176	-0.1085	No
93	Nrxn2	8888	-0.191	-0.1159	No
94	Pik3cb	9005	-0.201	-0.1193	No
95	Baiap2	9145	-0.214	-0.1241	No
96	Akt2	9267	-0.224	-0.1272	No
97	Vwf	9293	-0.227	-0.1223	No
98	Zyx	9369	-0.233	-0.1214	No
99	Rras	9586	-0.252	-0.1313	No
100	Itga9	9807	-0.268	-0.1411	No
101	Syk	9903	-0.276	-0.1405	No
102	Speg	10293	-0.311	-0.1628	Yes
103	Vcl	10341	-0.317	-0.1570	Yes
104	Cx3cl1	10351	-0.317	-0.1481	Yes
105	Sgce	10616	-0.348	-0.1590	Yes
106	B4galt1	10714	-0.356	-0.1561	Yes
107	Src	10785	-0.366	-0.1507	Yes
108	Tgfbi	11000	-0.393	-0.1562	Yes
109	Ctnnd1	11160	-0.415	-0.1566	Yes
110	Jam3	11234	-0.427	-0.1495	Yes
111	Nectin4	11321	-0.447	-0.1430	Yes
112	Nectin3	11342	-0.452	-0.1308	Yes
113	Cd34	11451	-0.472	-0.1253	Yes
114	Actn4	11502	-0.479	-0.1148	Yes
115	Shc1	11546	-0.488	-0.1034	Yes
116	Amigo2	11763	-0.538	-0.1047	Yes
117	Rasa1	11847	-0.565	-0.0943	Yes
118	Nectin1	11862	-0.571	-0.0780	Yes
119	Pbx2	11902	-0.585	-0.0634	Yes
120	Tspan4	11909	-0.587	-0.0460	Yes
121	Evl	11946	-0.598	-0.0308	Yes
122	Itga2	12030	-0.628	-0.0185	Yes
123	Pfn1	12055	-0.646	-0.0007	Yes
124	Pecam1	12277	-0.848	0.0070	Yes