Details for gene set HALLMARK_INTERFERON_GAMMA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group3_versus_Group4.HSC_Pheno.cls#Group3_versus_Group4_repos
Phenotype	HSC_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)	-0.25086236
Normalized Enrichment Score (NES)	-1.1302217
Nominal p-value	0.23360656
FDR q-value	0.9355748
FWER p-Value	0.984

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Batf2	99	0.857	0.0154	No
2	Psma2	122	0.816	0.0360	No
3	Jak2	666	0.554	0.0067	No
4	Mthfd2	1144	0.462	-0.0197	No
5	Rapgef6	1308	0.440	-0.0210	No
6	Trim26	1471	0.417	-0.0229	No
7	Pnpt1	1510	0.414	-0.0146	No
8	Fgl2	1529	0.411	-0.0048	No
9	Adar	1536	0.410	0.0059	No
10	Casp8	1600	0.401	0.0118	No
11	Ptpn2	1669	0.393	0.0170	No
12	Bpgm	1718	0.387	0.0236	No
13	Sppl2a	1861	0.367	0.0221	No
14	Cd86	2016	0.350	0.0190	No
15	Casp1	2057	0.346	0.0252	No
16	Il18bp	2148	0.336	0.0271	No
17	Trim25	2516	0.301	0.0053	No
18	Usp18	2596	0.294	0.0069	No
19	Plscr1	2655	0.290	0.0101	No
20	Stat4	2677	0.287	0.0162	No
21	Arl4a	2679	0.287	0.0240	No
22	Peli1	2733	0.285	0.0275	No
23	Zbp1	2884	0.273	0.0227	No
24	P2ry14	3094	0.256	0.0126	No
25	Ripk1	3179	0.249	0.0126	No
26	Sp110	3256	0.241	0.0130	No
27	Ifitm2	3281	0.239	0.0175	No
28	Gch1	3346	0.234	0.0187	No
29	Ube2l6	3373	0.232	0.0229	No
30	Ciita	3415	0.228	0.0258	No
31	Hif1a	3623	0.210	0.0146	No
32	Psmb8	3709	0.206	0.0133	No
33	Irf8	3777	0.202	0.0134	No
34	Irf5	3811	0.198	0.0161	No
35	Ifi35	3963	0.187	0.0089	No
36	Nfkb1	4040	0.182	0.0076	No
37	Il4ra	4078	0.178	0.0095	No
38	Irf2	4344	0.158	-0.0079	No
39	Vamp8	4421	0.152	-0.0099	No
40	Ifnar2	4597	0.141	-0.0204	No
41	Ogfr	4652	0.136	-0.0211	No
42	Tor1b	4720	0.132	-0.0230	No
43	Xaf1	4858	0.123	-0.0308	No
44	Ncoa3	4961	0.115	-0.0360	No
45	Il10ra	4991	0.113	-0.0353	No
46	Isg20	5017	0.112	-0.0343	No
47	Vamp5	5244	0.095	-0.0502	No
48	Trafd1	5323	0.090	-0.0541	No
49	Samd9l	5425	0.082	-0.0602	No
50	Psma3	5617	0.068	-0.0739	No
51	Trim21	5628	0.068	-0.0729	No
52	Ptpn1	5694	0.063	-0.0765	No
53	Bst2	5712	0.062	-0.0762	No
54	Ripk2	5740	0.060	-0.0767	No
55	Cmpk2	5931	0.046	-0.0910	No
56	Gbp3	5999	0.042	-0.0953	No
57	Il15	6010	0.042	-0.0950	No
58	Ddx60	6128	0.035	-0.1036	No
59	Pfkp	6168	0.033	-0.1059	No
60	Rnf31	6250	0.027	-0.1118	No
61	Selp	6256	0.026	-0.1115	No
62	Epsti1	6264	0.025	-0.1114	No
63	Itgb7	6265	0.025	-0.1107	No
64	Psmb9	6581	0.004	-0.1364	No
65	Socs3	6693	0.000	-0.1455	No
66	Oas2	6823	-0.006	-0.1559	No
67	Irf9	6851	-0.007	-0.1579	No
68	Irf7	6882	-0.010	-0.1601	No
69	Rsad2	6894	-0.011	-0.1607	No
70	Helz2	6994	-0.018	-0.1683	No
71	Ifi27	7039	-0.021	-0.1713	No
72	Arid5b	7110	-0.025	-0.1764	No
73	Ifih1	7178	-0.029	-0.1811	No
74	Psmb2	7214	-0.032	-0.1831	No
75	Tnfaip3	7275	-0.038	-0.1869	No
76	Oas3	7349	-0.042	-0.1918	No
77	Ifit2	7381	-0.045	-0.1931	No
78	Upp1	7390	-0.046	-0.1925	No
79	Parp14	7491	-0.053	-0.1992	No
80	Ifitm3	7545	-0.056	-0.2020	No
81	Ifi44	7590	-0.059	-0.2040	No
82	Tap1	7723	-0.069	-0.2129	No
83	Casp4	7855	-0.079	-0.2215	No
84	Cmtr1	7904	-0.084	-0.2231	No
85	Tnfaip2	8032	-0.094	-0.2310	No
86	Sod2	8052	-0.096	-0.2299	No
87	Stat3	8058	-0.096	-0.2277	No
88	Znfx1	8104	-0.099	-0.2286	No
89	Cd274	8115	-0.099	-0.2268	No
90	Lats2	8132	-0.101	-0.2253	No
91	H2-DMa	8259	-0.110	-0.2326	No
92	Socs1	8290	-0.113	-0.2320	No
93	Herc6	8300	-0.114	-0.2296	No
94	Psme2	8463	-0.127	-0.2394	No
95	Rigi	8473	-0.128	-0.2366	No
96	Isoc1	8504	-0.130	-0.2355	No
97	Lgals3bp	8560	-0.134	-0.2363	No
98	Psme1	8565	-0.134	-0.2330	No
99	Wars1	8584	-0.136	-0.2307	No
100	Rnf213	8831	-0.160	-0.2465	Yes
101	Txnip	8832	-0.160	-0.2421	Yes
102	Il7	8864	-0.161	-0.2402	Yes
103	Nmi	8923	-0.166	-0.2404	Yes
104	Rtp4	8966	-0.169	-0.2392	Yes
105	Nampt	8971	-0.169	-0.2349	Yes
106	Tdrd7	8994	-0.171	-0.2320	Yes
107	Lcp2	9022	-0.173	-0.2295	Yes
108	Pde4b	9099	-0.179	-0.2308	Yes
109	Eif4e3	9108	-0.180	-0.2266	Yes
110	Myd88	9177	-0.187	-0.2270	Yes
111	Stat2	9191	-0.188	-0.2229	Yes
112	Btg1	9195	-0.188	-0.2180	Yes
113	H2-Aa	9422	-0.205	-0.2309	Yes
114	St8sia4	9469	-0.210	-0.2289	Yes
115	Psmb10	9575	-0.220	-0.2315	Yes
116	Icam1	9725	-0.232	-0.2374	Yes
117	Pla2g4a	9733	-0.232	-0.2316	Yes
118	Trim14	9750	-0.234	-0.2265	Yes
119	Auts2	9785	-0.237	-0.2227	Yes
120	Pnp	9823	-0.241	-0.2192	Yes
121	Parp12	9919	-0.252	-0.2200	Yes
122	Mx2	10175	-0.274	-0.2334	Yes
123	Tnfsf10	10179	-0.275	-0.2261	Yes
124	Casp7	10212	-0.278	-0.2211	Yes
125	Il15ra	10216	-0.279	-0.2137	Yes
126	Cd74	10244	-0.282	-0.2082	Yes
127	Tapbp	10337	-0.290	-0.2077	Yes
128	Lap3	10415	-0.298	-0.2059	Yes
129	Sri	10457	-0.303	-0.2009	Yes
130	Nup93	10531	-0.314	-0.1983	Yes
131	Cd38	10591	-0.320	-0.1944	Yes
132	Eif2ak2	10618	-0.322	-0.1877	Yes
133	Mvp	10800	-0.348	-0.1929	Yes
134	Oasl1	11125	-0.393	-0.2087	Yes
135	Casp3	11298	-0.417	-0.2114	Yes
136	Nfkbia	11343	-0.424	-0.2034	Yes
137	Nlrc5	11595	-0.469	-0.2111	Yes
138	Stat1	11615	-0.474	-0.1996	Yes
139	Fas	11642	-0.481	-0.1886	Yes
140	Dhx58	11675	-0.487	-0.1778	Yes
141	Slc25a28	11731	-0.500	-0.1686	Yes
142	Pim1	11735	-0.501	-0.1551	Yes
143	St3gal5	11740	-0.503	-0.1417	Yes
144	Lysmd2	11871	-0.542	-0.1375	Yes
145	Bank1	11999	-0.587	-0.1318	Yes
146	Nod1	12030	-0.597	-0.1179	Yes
147	Sspn	12043	-0.605	-0.1023	Yes
148	B2m	12061	-0.613	-0.0869	Yes
149	Ly6e	12083	-0.625	-0.0715	Yes
150	Samhd1	12086	-0.626	-0.0545	Yes
151	Pml	12120	-0.645	-0.0395	Yes
152	Ptpn6	12161	-0.679	-0.0241	Yes
153	Irf1	12198	-0.709	-0.0077	Yes
154	Rbck1	12248	-0.769	0.0094	Yes