| Dataset | HSC.HSC_Pheno.cls#Group3_versus_Group4.HSC_Pheno.cls#Group3_versus_Group4_repos |
| Phenotype | HSC_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_IL2_STAT5_SIGNALING |
| Enrichment Score (ES) | -0.26824588 |
| Normalized Enrichment Score (NES) | -1.2641345 |
| Nominal p-value | 0.07235622 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.852 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Tnfrsf21 | 110 | 0.850 | 0.0109 | No |
| 2 | Spry4 | 117 | 0.829 | 0.0298 | No |
| 3 | Furin | 301 | 0.673 | 0.0305 | No |
| 4 | Gadd45b | 302 | 0.672 | 0.0463 | No |
| 5 | Pdcd2l | 305 | 0.672 | 0.0618 | No |
| 6 | Tnfrsf4 | 413 | 0.626 | 0.0677 | No |
| 7 | Myc | 435 | 0.615 | 0.0804 | No |
| 8 | Bcl2l1 | 652 | 0.558 | 0.0758 | No |
| 9 | Mapkapk2 | 750 | 0.534 | 0.0803 | No |
| 10 | Ptch1 | 846 | 0.514 | 0.0846 | No |
| 11 | Ccnd2 | 881 | 0.508 | 0.0937 | No |
| 12 | Umps | 905 | 0.501 | 0.1035 | No |
| 13 | Cyfip1 | 946 | 0.494 | 0.1118 | No |
| 14 | Odc1 | 1173 | 0.458 | 0.1040 | No |
| 15 | Bcl2 | 1264 | 0.445 | 0.1070 | No |
| 16 | Prkch | 1354 | 0.433 | 0.1099 | No |
| 17 | Cdc42se2 | 1456 | 0.418 | 0.1114 | No |
| 18 | Ecm1 | 1495 | 0.415 | 0.1180 | No |
| 19 | Fgl2 | 1529 | 0.411 | 0.1249 | No |
| 20 | Il3ra | 1731 | 0.385 | 0.1174 | No |
| 21 | Ager | 1999 | 0.351 | 0.1038 | No |
| 22 | Lrig1 | 2000 | 0.351 | 0.1120 | No |
| 23 | Cd86 | 2016 | 0.350 | 0.1189 | No |
| 24 | Gabarapl1 | 2067 | 0.344 | 0.1229 | No |
| 25 | Ncs1 | 2084 | 0.343 | 0.1296 | No |
| 26 | Amacr | 2105 | 0.339 | 0.1359 | No |
| 27 | Slc39a8 | 2422 | 0.308 | 0.1173 | No |
| 28 | P2rx4 | 2497 | 0.303 | 0.1183 | No |
| 29 | Plscr1 | 2655 | 0.290 | 0.1122 | No |
| 30 | Arl4a | 2679 | 0.287 | 0.1170 | No |
| 31 | Ndrg1 | 2885 | 0.273 | 0.1067 | No |
| 32 | Dcps | 2891 | 0.273 | 0.1126 | No |
| 33 | Ttc39b | 2974 | 0.264 | 0.1121 | No |
| 34 | Plagl1 | 3247 | 0.242 | 0.0955 | No |
| 35 | Snx9 | 3618 | 0.211 | 0.0701 | No |
| 36 | Ifngr1 | 3698 | 0.206 | 0.0685 | No |
| 37 | Irf8 | 3777 | 0.202 | 0.0668 | No |
| 38 | Rabgap1l | 3799 | 0.200 | 0.0698 | No |
| 39 | Ikzf2 | 3803 | 0.199 | 0.0742 | No |
| 40 | Galm | 3825 | 0.197 | 0.0771 | No |
| 41 | Map3k8 | 4003 | 0.185 | 0.0669 | No |
| 42 | Uck2 | 4020 | 0.183 | 0.0699 | No |
| 43 | Il4ra | 4078 | 0.178 | 0.0694 | No |
| 44 | Plec | 4133 | 0.175 | 0.0690 | No |
| 45 | Hk2 | 4427 | 0.152 | 0.0486 | No |
| 46 | Sell | 4447 | 0.151 | 0.0506 | No |
| 47 | Dennd5a | 4628 | 0.138 | 0.0391 | No |
| 48 | Tiam1 | 4902 | 0.120 | 0.0195 | No |
| 49 | Car2 | 4920 | 0.118 | 0.0209 | No |
| 50 | Ncoa3 | 4961 | 0.115 | 0.0203 | No |
| 51 | Il10ra | 4991 | 0.113 | 0.0206 | No |
| 52 | Batf | 5134 | 0.104 | 0.0114 | No |
| 53 | P4ha1 | 5379 | 0.085 | -0.0066 | No |
| 54 | Alcam | 5454 | 0.080 | -0.0107 | No |
| 55 | Enpp1 | 5689 | 0.063 | -0.0284 | No |
| 56 | Snx14 | 5810 | 0.055 | -0.0370 | No |
| 57 | Anxa4 | 5915 | 0.047 | -0.0444 | No |
| 58 | Gbp3 | 5999 | 0.042 | -0.0502 | No |
| 59 | Flt3l | 6015 | 0.041 | -0.0504 | No |
| 60 | Dhrs3 | 6060 | 0.040 | -0.0531 | No |
| 61 | Ckap4 | 6065 | 0.040 | -0.0525 | No |
| 62 | Selp | 6256 | 0.026 | -0.0674 | No |
| 63 | Spred2 | 6321 | 0.021 | -0.0722 | No |
| 64 | Wls | 6340 | 0.020 | -0.0732 | No |
| 65 | Igf2r | 6346 | 0.019 | -0.0731 | No |
| 66 | Ikzf4 | 6500 | 0.008 | -0.0855 | No |
| 67 | S100a1 | 6685 | 0.000 | -0.1005 | No |
| 68 | Ptrh2 | 7041 | -0.021 | -0.1291 | No |
| 69 | Socs2 | 7043 | -0.021 | -0.1287 | No |
| 70 | Eef1akmt1 | 7051 | -0.022 | -0.1288 | No |
| 71 | Itga6 | 7430 | -0.048 | -0.1586 | No |
| 72 | Gata1 | 7469 | -0.051 | -0.1605 | No |
| 73 | Pou2f1 | 7483 | -0.052 | -0.1603 | No |
| 74 | Ifitm3 | 7545 | -0.056 | -0.1640 | No |
| 75 | Twsg1 | 7729 | -0.070 | -0.1773 | No |
| 76 | Igf1r | 7861 | -0.079 | -0.1862 | No |
| 77 | Fah | 7873 | -0.080 | -0.1852 | No |
| 78 | Myo1c | 7902 | -0.083 | -0.1856 | No |
| 79 | Ctsz | 7917 | -0.085 | -0.1847 | No |
| 80 | Irf6 | 7921 | -0.085 | -0.1830 | No |
| 81 | St3gal4 | 8242 | -0.109 | -0.2066 | No |
| 82 | Ccne1 | 8245 | -0.109 | -0.2042 | No |
| 83 | Socs1 | 8290 | -0.113 | -0.2052 | No |
| 84 | Klf6 | 8389 | -0.122 | -0.2104 | No |
| 85 | Prnp | 8432 | -0.125 | -0.2109 | No |
| 86 | Itgav | 8461 | -0.127 | -0.2102 | No |
| 87 | Itih5 | 8576 | -0.136 | -0.2164 | No |
| 88 | Nfkbiz | 8588 | -0.136 | -0.2141 | No |
| 89 | Tnfrsf1b | 8595 | -0.137 | -0.2114 | No |
| 90 | Serpinb6a | 8704 | -0.147 | -0.2168 | No |
| 91 | Gpx4 | 8753 | -0.151 | -0.2172 | No |
| 92 | Slc1a5 | 8919 | -0.166 | -0.2268 | No |
| 93 | Slc29a2 | 9156 | -0.185 | -0.2418 | No |
| 94 | Plpp1 | 9171 | -0.186 | -0.2386 | No |
| 95 | Rnh1 | 9198 | -0.188 | -0.2363 | No |
| 96 | Il18r1 | 9208 | -0.188 | -0.2326 | No |
| 97 | Cish | 9326 | -0.196 | -0.2376 | No |
| 98 | Smpdl3a | 9498 | -0.213 | -0.2466 | No |
| 99 | Slc2a3 | 9579 | -0.221 | -0.2480 | No |
| 100 | Etfbkmt | 9757 | -0.235 | -0.2570 | No |
| 101 | Pnp | 9823 | -0.241 | -0.2567 | No |
| 102 | Mxd1 | 9859 | -0.246 | -0.2538 | No |
| 103 | Eno3 | 9975 | -0.258 | -0.2572 | No |
| 104 | Cd81 | 10111 | -0.268 | -0.2620 | Yes |
| 105 | Glipr2 | 10137 | -0.272 | -0.2577 | Yes |
| 106 | Tnfsf10 | 10179 | -0.275 | -0.2546 | Yes |
| 107 | Xbp1 | 10233 | -0.281 | -0.2523 | Yes |
| 108 | Syngr2 | 10234 | -0.281 | -0.2458 | Yes |
| 109 | Cdc6 | 10256 | -0.284 | -0.2408 | Yes |
| 110 | Itgae | 10279 | -0.287 | -0.2359 | Yes |
| 111 | Ahnak | 10486 | -0.307 | -0.2456 | Yes |
| 112 | Rhoh | 10651 | -0.326 | -0.2514 | Yes |
| 113 | Bhlhe40 | 10738 | -0.339 | -0.2505 | Yes |
| 114 | Traf1 | 10753 | -0.342 | -0.2437 | Yes |
| 115 | Swap70 | 10790 | -0.347 | -0.2385 | Yes |
| 116 | Cdkn1c | 10802 | -0.349 | -0.2313 | Yes |
| 117 | Cdcp1 | 10828 | -0.352 | -0.2251 | Yes |
| 118 | Lrrc8c | 10841 | -0.353 | -0.2178 | Yes |
| 119 | Plin2 | 10881 | -0.358 | -0.2126 | Yes |
| 120 | Ccnd3 | 11006 | -0.377 | -0.2139 | Yes |
| 121 | Sh3bgrl2 | 11057 | -0.385 | -0.2090 | Yes |
| 122 | Maff | 11079 | -0.388 | -0.2016 | Yes |
| 123 | Tnfrsf18 | 11141 | -0.393 | -0.1974 | Yes |
| 124 | Ahr | 11272 | -0.413 | -0.1984 | Yes |
| 125 | Ltb | 11278 | -0.414 | -0.1891 | Yes |
| 126 | Casp3 | 11298 | -0.417 | -0.1809 | Yes |
| 127 | Abcb1a | 11380 | -0.429 | -0.1775 | Yes |
| 128 | Nop2 | 11411 | -0.433 | -0.1699 | Yes |
| 129 | Csf1 | 11473 | -0.446 | -0.1644 | Yes |
| 130 | Bmpr2 | 11512 | -0.453 | -0.1569 | Yes |
| 131 | Hycc2 | 11553 | -0.460 | -0.1495 | Yes |
| 132 | Huwe1 | 11575 | -0.465 | -0.1403 | Yes |
| 133 | Hipk2 | 11629 | -0.478 | -0.1335 | Yes |
| 134 | Pim1 | 11735 | -0.501 | -0.1303 | Yes |
| 135 | Myo1e | 11738 | -0.502 | -0.1188 | Yes |
| 136 | Cd44 | 11804 | -0.524 | -0.1118 | Yes |
| 137 | Gucy1b1 | 11853 | -0.536 | -0.1032 | Yes |
| 138 | Capg | 11857 | -0.537 | -0.0909 | Yes |
| 139 | Syt11 | 11891 | -0.546 | -0.0809 | Yes |
| 140 | Lclat1 | 11984 | -0.582 | -0.0748 | Yes |
| 141 | Gsto1 | 12092 | -0.631 | -0.0688 | Yes |
| 142 | Phtf2 | 12131 | -0.653 | -0.0566 | Yes |
| 143 | Tgm2 | 12135 | -0.657 | -0.0415 | Yes |
| 144 | Pus1 | 12227 | -0.745 | -0.0315 | Yes |
| 145 | Rhob | 12288 | -0.841 | -0.0168 | Yes |
| 146 | Rora | 12334 | -0.976 | 0.0024 | Yes |

