| Dataset | HSC.HSC_Pheno.cls#Group3_versus_Group4.HSC_Pheno.cls#Group3_versus_Group4_repos |
| Phenotype | HSC_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | 0.21620701 |
| Normalized Enrichment Score (NES) | 0.9002152 |
| Nominal p-value | 0.66041666 |
| FDR q-value | 0.9225209 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Ccnd1 | 158 | 0.770 | 0.0135 | Yes |
| 2 | Rbbp8 | 344 | 0.656 | 0.0210 | Yes |
| 3 | Ppif | 386 | 0.637 | 0.0395 | Yes |
| 4 | Cd9 | 481 | 0.601 | 0.0524 | Yes |
| 5 | Rnaseh2a | 658 | 0.557 | 0.0572 | Yes |
| 6 | Jak2 | 666 | 0.554 | 0.0756 | Yes |
| 7 | Arl3 | 698 | 0.545 | 0.0918 | Yes |
| 8 | Stil | 1038 | 0.478 | 0.0805 | Yes |
| 9 | Dnajc1 | 1043 | 0.477 | 0.0966 | Yes |
| 10 | Bcl2 | 1264 | 0.445 | 0.0939 | Yes |
| 11 | Tjp3 | 1271 | 0.444 | 0.1086 | Yes |
| 12 | Btg3 | 1284 | 0.443 | 0.1228 | Yes |
| 13 | Add3 | 1444 | 0.418 | 0.1242 | Yes |
| 14 | Cdc20 | 1445 | 0.418 | 0.1386 | Yes |
| 15 | Celsr2 | 1462 | 0.417 | 0.1516 | Yes |
| 16 | Dusp2 | 1513 | 0.413 | 0.1617 | Yes |
| 17 | Ugdh | 1514 | 0.413 | 0.1759 | Yes |
| 18 | Dcxr | 1553 | 0.407 | 0.1867 | Yes |
| 19 | Slc2a8 | 1561 | 0.406 | 0.2001 | Yes |
| 20 | Prkar2b | 1734 | 0.384 | 0.1992 | Yes |
| 21 | Atp2b4 | 1788 | 0.377 | 0.2079 | Yes |
| 22 | Top2a | 1929 | 0.359 | 0.2088 | Yes |
| 23 | Tob1 | 2012 | 0.350 | 0.2141 | Yes |
| 24 | Idh2 | 2386 | 0.313 | 0.1944 | Yes |
| 25 | Pdcd4 | 2389 | 0.312 | 0.2049 | Yes |
| 26 | Slc29a1 | 2537 | 0.299 | 0.2032 | Yes |
| 27 | Abhd2 | 2589 | 0.294 | 0.2091 | Yes |
| 28 | Slc7a5 | 2626 | 0.292 | 0.2162 | Yes |
| 29 | Gins2 | 2778 | 0.282 | 0.2136 | No |
| 30 | Dlg5 | 2878 | 0.274 | 0.2149 | No |
| 31 | Abca3 | 3213 | 0.246 | 0.1960 | No |
| 32 | Scarb1 | 3237 | 0.243 | 0.2025 | No |
| 33 | St14 | 3285 | 0.239 | 0.2069 | No |
| 34 | Opn3 | 3443 | 0.225 | 0.2018 | No |
| 35 | Xrcc3 | 3593 | 0.213 | 0.1969 | No |
| 36 | Klf4 | 3635 | 0.209 | 0.2007 | No |
| 37 | Scnn1a | 3646 | 0.209 | 0.2071 | No |
| 38 | Itpk1 | 3806 | 0.199 | 0.2009 | No |
| 39 | Fgfr3 | 3823 | 0.197 | 0.2064 | No |
| 40 | Unc13b | 3881 | 0.193 | 0.2084 | No |
| 41 | Etfb | 3990 | 0.186 | 0.2059 | No |
| 42 | Anxa9 | 4217 | 0.168 | 0.1933 | No |
| 43 | Slc22a5 | 4584 | 0.142 | 0.1683 | No |
| 44 | Impa2 | 4820 | 0.125 | 0.1534 | No |
| 45 | Rab31 | 4851 | 0.123 | 0.1552 | No |
| 46 | Tiam1 | 4902 | 0.120 | 0.1552 | No |
| 47 | Car2 | 4920 | 0.118 | 0.1579 | No |
| 48 | Isg20 | 5017 | 0.112 | 0.1539 | No |
| 49 | Fdft1 | 5084 | 0.107 | 0.1521 | No |
| 50 | Batf | 5134 | 0.104 | 0.1517 | No |
| 51 | Jak1 | 5204 | 0.099 | 0.1495 | No |
| 52 | Plk4 | 5431 | 0.082 | 0.1338 | No |
| 53 | Lsr | 5437 | 0.081 | 0.1362 | No |
| 54 | Cox6c | 5580 | 0.071 | 0.1271 | No |
| 55 | Rabep1 | 5762 | 0.059 | 0.1143 | No |
| 56 | Aldh3a2 | 5919 | 0.047 | 0.1032 | No |
| 57 | Slc26a2 | 6157 | 0.034 | 0.0850 | No |
| 58 | Plxnb1 | 6450 | 0.012 | 0.0616 | No |
| 59 | Sord | 6512 | 0.008 | 0.0569 | No |
| 60 | Rps6ka2 | 6558 | 0.006 | 0.0534 | No |
| 61 | Nxt1 | 6671 | 0.000 | 0.0442 | No |
| 62 | S100a9 | 6697 | 0.000 | 0.0422 | No |
| 63 | Sult2b1 | 6780 | -0.002 | 0.0356 | No |
| 64 | Slc16a1 | 7122 | -0.027 | 0.0087 | No |
| 65 | Dhcr7 | 7177 | -0.029 | 0.0053 | No |
| 66 | Amfr | 7231 | -0.033 | 0.0021 | No |
| 67 | Fkbp4 | 7270 | -0.037 | 0.0003 | No |
| 68 | Llgl2 | 7388 | -0.046 | -0.0077 | No |
| 69 | Snx10 | 7521 | -0.055 | -0.0166 | No |
| 70 | Ptges | 7553 | -0.057 | -0.0172 | No |
| 71 | Hspa4l | 7629 | -0.062 | -0.0212 | No |
| 72 | Il6st | 7652 | -0.064 | -0.0208 | No |
| 73 | Ncor2 | 7943 | -0.086 | -0.0415 | No |
| 74 | Kcnk5 | 8063 | -0.096 | -0.0479 | No |
| 75 | Gfus | 8169 | -0.104 | -0.0529 | No |
| 76 | Farp1 | 8272 | -0.111 | -0.0574 | No |
| 77 | Nab2 | 8410 | -0.123 | -0.0644 | No |
| 78 | Mettl3 | 8492 | -0.129 | -0.0666 | No |
| 79 | Zfp36 | 8620 | -0.140 | -0.0721 | No |
| 80 | Mocs2 | 9005 | -0.172 | -0.0976 | No |
| 81 | Myb | 9098 | -0.179 | -0.0990 | No |
| 82 | Bag1 | 9315 | -0.195 | -0.1099 | No |
| 83 | Cish | 9326 | -0.196 | -0.1040 | No |
| 84 | Siah2 | 9365 | -0.199 | -0.1003 | No |
| 85 | Nrip1 | 9374 | -0.200 | -0.0941 | No |
| 86 | Flnb | 9405 | -0.203 | -0.0895 | No |
| 87 | Chpt1 | 9658 | -0.226 | -0.1023 | No |
| 88 | Ptger3 | 9915 | -0.251 | -0.1146 | No |
| 89 | Igfbp4 | 9948 | -0.256 | -0.1084 | No |
| 90 | Plaat3 | 10071 | -0.265 | -0.1093 | No |
| 91 | Dynlt3 | 10223 | -0.279 | -0.1120 | No |
| 92 | Frk | 10226 | -0.280 | -0.1026 | No |
| 93 | Xbp1 | 10233 | -0.281 | -0.0935 | No |
| 94 | Cdc6 | 10256 | -0.284 | -0.0855 | No |
| 95 | Tpd52l1 | 10586 | -0.319 | -0.1014 | No |
| 96 | Fos | 10616 | -0.322 | -0.0927 | No |
| 97 | Slc24a3 | 10727 | -0.337 | -0.0901 | No |
| 98 | Ass1 | 10729 | -0.338 | -0.0786 | No |
| 99 | Large1 | 11064 | -0.386 | -0.0926 | No |
| 100 | Elovl5 | 11148 | -0.394 | -0.0859 | No |
| 101 | Aff1 | 11223 | -0.404 | -0.0780 | No |
| 102 | Pgr | 11417 | -0.434 | -0.0789 | No |
| 103 | Blvrb | 11580 | -0.466 | -0.0761 | No |
| 104 | Tspan13 | 11599 | -0.470 | -0.0615 | No |
| 105 | Cyp26b1 | 11601 | -0.471 | -0.0454 | No |
| 106 | Cd44 | 11804 | -0.524 | -0.0439 | No |
| 107 | Fkbp5 | 11933 | -0.561 | -0.0351 | No |
| 108 | Dnajc12 | 12090 | -0.630 | -0.0262 | No |
| 109 | Ptpn6 | 12161 | -0.679 | -0.0086 | No |
| 110 | Myof | 12214 | -0.730 | 0.0122 | No |

