DatasetHSC.HSC_Pheno.cls#Group3_versus_Group4.HSC_Pheno.cls#Group3_versus_Group4_repos
PhenotypeHSC_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.43157881
Normalized Enrichment Score (NES)1.4487525
Nominal p-value0.03526971
FDR q-value0.22739154
FWER p-Value0.396
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Brms1l700.9160.0118Yes
2Paics890.8720.0270Yes
3Wee12040.7290.0317Yes
4Smc1a2810.6840.0385Yes
5Rpa22860.6810.0512Yes
6Mcm32960.6750.0634Yes
7Gins43110.6710.0751Yes
8Kif18b4090.6280.0792Yes
9Chek24280.6190.0896Yes
10Hus14310.6170.1013Yes
11Myc4350.6150.1128Yes
12Rfc14580.6070.1226Yes
13Mcm65440.5820.1268Yes
14Nop565450.5810.1379Yes
15Racgap15950.5710.1448Yes
16Pds5b6260.5620.1532Yes
17Rnaseh2a6580.5570.1613Yes
18Tfrc6930.5460.1690Yes
19Cdk17000.5440.1789Yes
20Bub1b7760.5260.1828Yes
21Cenpm7870.5230.1920Yes
22Birc57940.5220.2015Yes
23Depdc1a8150.5190.2098Yes
24Exosc88370.5160.2180Yes
25Ctcf8800.5080.2243Yes
26Ilf38950.5040.2328Yes
27Mcm59400.4950.2386Yes
28Rbbp79450.4940.2478Yes
29Gins19490.4940.2570Yes
30Cbx510280.4810.2598Yes
31Ipo710540.4750.2669Yes
32Ccnb210600.4750.2755Yes
33Shmt111330.4630.2785Yes
34Mthfd211440.4620.2865Yes
35Mad2l111520.4610.2948Yes
36Srsf111570.4600.3033Yes
37Cdk413370.4360.2969Yes
38Mms22l13990.4270.3001Yes
39Dnmt114130.4250.3072Yes
40Cdc2014450.4180.3127Yes
41Pcna15660.4060.3106Yes
42Syncrip16230.4000.3137Yes
43Nasp16310.3980.3207Yes
44Lmnb117090.3880.3218Yes
45Smc317290.3850.3276Yes
46Nme117350.3840.3346Yes
47Ak217960.3760.3369Yes
48Timeless18540.3680.3392Yes
49Trp5319120.3600.3414Yes
50Hmgb319260.3590.3472Yes
51Top2a19290.3590.3540Yes
52Kif419510.3570.3591Yes
53Hmmr19810.3530.3635Yes
54Lig120450.3470.3649Yes
55Prim221100.3390.3662Yes
56Mre11a21410.3360.3702Yes
57Tacc321610.3350.3750Yes
58Mki6722360.3270.3752Yes
59Usp122500.3260.3804Yes
60Hmgb222900.3220.3833Yes
61Mlh123740.3140.3825Yes
62Msh224210.3080.3847Yes
63Cdkn1b25180.3010.3826Yes
64Tk125260.3000.3877Yes
65Cdkn2c25980.2940.3876Yes
66Dut26270.2920.3908Yes
67Lsm826490.2900.3947Yes
68Ccp11026730.2880.3983Yes
69Stmn127680.2820.3960Yes
70Spag527700.2820.4013Yes
71Rfc327790.2820.4061Yes
72Prdx427860.2810.4110Yes
73Diaph328670.2750.4096Yes
74Pttg129110.2700.4113Yes
75Smc429950.2620.4095Yes
76Ube2s30220.2610.4124Yes
77Lyar30580.2590.4145Yes
78Nup10730930.2560.4166Yes
79Pa2g431430.2510.4174Yes
80Cks231530.2510.4214Yes
81Psip131780.2490.4242Yes
82Dscc131940.2480.4278Yes
83Cenpe32060.2460.4316Yes
84Atad233790.2320.4219No
85Nup20534280.2260.4223No
86Cdc25a34680.2250.4234No
87Prkdc35060.2210.4246No
88Rad136390.2090.4178No
89Slbp37390.2040.4136No
90Nap1l137740.2020.4146No
91Tbrg438510.1950.4121No
92Rrm239250.1900.4098No
93Xrcc640050.1840.4068No
94Srsf240080.1840.4102No
95Chek140240.1830.4125No
96H2az140730.1790.4120No
97Aurka41290.1750.4108No
98Suv39h143120.1610.3989No
99Nolc143750.1560.3968No
100Tubg144910.1480.3902No
101Pola247000.1330.3757No
102Pms249050.1200.3612No
103Ran49750.1140.3577No
104Cit50140.1120.3568No
105Pnn50600.1090.3552No
106Trip1351410.1030.3506No
107Cdca852490.0950.3436No
108Dck52910.0920.3420No
109Tipin53920.0840.3354No
110Plk454310.0820.3338No
111Pole54750.0790.3318No
112Tmpo55170.0760.3299No
113Jpt155400.0750.3296No
114Mcm455850.0710.3273No
115Eif2s156410.0660.3241No
116Rad51ap156750.0640.3226No
117Pold257440.0600.3182No
118Eed58240.0530.3127No
119Asf1a58500.0510.3116No
120Ddx39a58560.0510.3122No
121Mcm258710.0500.3120No
122Tubb558840.0490.3120No
123Snrpb59160.0470.3103No
124Luc7l361020.0370.2958No
125Tra2b62700.0250.2826No
126Pan262980.0230.2808No
127Dek64650.0110.2674No
128Cse1l64780.0100.2666No
129Dclre1b66110.0020.2558No
130Psmc3ip66430.0000.2533No
131Brca16822-0.0060.2388No
132Lbr6935-0.0140.2299No
133Hells6972-0.0160.2272No
134Prps17019-0.0200.2238No
135Ssrp17111-0.0260.2168No
136Rpa17112-0.0260.2173No
137Hnrnpd7455-0.0500.1902No
138Donson7460-0.0510.1909No
139Anp32e7465-0.0510.1915No
140Nup1537611-0.0600.1808No
141Pole47971-0.0880.1530No
142Ncapd27996-0.0910.1528No
143Orc68165-0.1040.1410No
144Mcm78166-0.1040.1429No
145Rfc28196-0.1060.1426No
146Pold38214-0.1070.1433No
147Ccne18245-0.1090.1429No
148Stag18247-0.1090.1449No
149Nbn8374-0.1200.1369No
150Rad218433-0.1250.1345No
151Rpa38675-0.1450.1175No
152Mybl28889-0.1630.1031No
153Gspt18963-0.1690.1004No
154Brca29127-0.1820.0905No
155Bard19189-0.1870.0891No
156Spc259200-0.1880.0919No
157Phf5a9275-0.1910.0895No
158Ppp1r89443-0.2060.0797No
159Pold19470-0.2100.0816No
160Ing39512-0.2140.0823No
161Xpo19566-0.2190.0822No
162Ezh29689-0.2290.0765No
163Ube2t9691-0.2290.0808No
164Rad509703-0.2300.0843No
165Dlgap59715-0.2310.0879No
166Cnot910039-0.2620.0664No
167H2ax10532-0.3140.0320No
168E2f810724-0.3370.0228No
169Ranbp110730-0.3380.0289No
170Ppm1d10811-0.3500.0290No
171Zw1010921-0.3630.0270No
172Cdc25b11521-0.455-0.0134No
173Dctpp111729-0.500-0.0209No
174Wdr9011745-0.504-0.0124No
175Nudt2111856-0.537-0.0112No
176Gins311896-0.546-0.0039No
177Ubr712077-0.623-0.0068No
178Orc212209-0.726-0.0036No
179Smc612291-0.8440.0059No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS