Details for gene set HALLMARK_TGF_BETA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group4.HSC_Pheno.cls#Group2_versus_Group4_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)	0.24388504
Normalized Enrichment Score (NES)	1.0143642
Nominal p-value	0.46341464
FDR q-value	0.6929619
FWER p-Value	0.994

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Acvr1	63	0.933	0.0775	Yes
2	Rhoa	195	0.744	0.1328	Yes
3	Tgfb1	514	0.589	0.1591	Yes
4	Smad6	982	0.485	0.1642	Yes
5	Ppp1ca	1103	0.464	0.1956	Yes
6	Tjp1	1293	0.438	0.2191	Yes
7	Skil	1444	0.417	0.2439	Yes
8	Sptbn1	2101	0.344	0.2211	No
9	Ctnnb1	2462	0.311	0.2194	No
10	Ppp1r15a	2613	0.297	0.2336	No
11	Ube2d3	3318	0.238	0.1975	No
12	Smad3	3827	0.196	0.1736	No
13	Ski	3844	0.195	0.1896	No
14	Smurf1	4153	0.171	0.1798	No
15	Cdk9	4281	0.162	0.1838	No
16	Map3k7	4365	0.155	0.1908	No
17	Smad7	4425	0.150	0.1993	No
18	Tgif1	4435	0.150	0.2118	No
19	Tgfbr1	4910	0.114	0.1835	No
20	Slc20a1	4928	0.113	0.1921	No
21	Cdkn1c	5402	0.081	0.1609	No
22	Hdac1	5637	0.065	0.1477	No
23	Apc	5866	0.049	0.1335	No
24	Ifngr2	6020	0.038	0.1244	No
25	Junb	6079	0.034	0.1227	No
26	Arid4b	6091	0.032	0.1247	No
27	Bmpr2	6845	-0.019	0.0652	No
28	Eng	7326	-0.056	0.0313	No
29	Trim33	7806	-0.093	0.0006	No
30	Xiap	7849	-0.096	0.0057	No
31	Klf10	7876	-0.098	0.0122	No
32	Smad1	8055	-0.111	0.0076	No
33	Pmepa1	8150	-0.117	0.0104	No
34	Fkbp1a	8159	-0.118	0.0201	No
35	Fnta	8655	-0.158	-0.0060	No
36	Bmpr1a	8757	-0.163	0.0002	No
37	Ncor2	8780	-0.165	0.0131	No
38	Smurf2	8851	-0.172	0.0226	No
39	Bcar3	9524	-0.229	-0.0116	No
40	Furin	9819	-0.258	-0.0126	No
41	Wwtr1	9935	-0.268	0.0017	No
42	Rab31	10097	-0.282	0.0137	No
43	Thbs1	11535	-0.464	-0.0619	No
44	Ppm1a	12183	-0.683	-0.0539	No
45	Hipk2	12272	-0.772	0.0074	No