Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group4.HSC_Pheno.cls#Group2_versus_Group4_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_GLYCOLYSIS
Enrichment Score (ES)	-0.245512
Normalized Enrichment Score (NES)	-1.1466378
Nominal p-value	0.18480493
FDR q-value	0.77174336
FWER p-Value	0.928

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	G6pdx	142	0.797	0.0112	No
2	Lhpp	891	0.502	-0.0357	No
3	Mxi1	1000	0.482	-0.0308	No
4	Stmn1	1056	0.473	-0.0217	No
5	Galk1	1151	0.456	-0.0164	No
6	Arpp19	1288	0.439	-0.0149	No
7	Cxcr4	1379	0.425	-0.0102	No
8	Got1	1406	0.423	-0.0002	No
9	Taldo1	1412	0.421	0.0114	No
10	Cdk1	1457	0.415	0.0197	No
11	Fkbp4	1504	0.410	0.0277	No
12	Got2	1601	0.397	0.0312	No
13	Fut8	2066	0.348	0.0032	No
14	Phka2	2079	0.347	0.0121	No
15	Cog2	2214	0.334	0.0107	No
16	Pgm2	2224	0.333	0.0195	No
17	Ak3	2554	0.304	0.0013	No
18	Ier3	2645	0.295	0.0023	No
19	Ddit4	2660	0.294	0.0096	No
20	Dld	2664	0.294	0.0178	No
21	Slc25a13	2701	0.291	0.0232	No
22	Agl	2779	0.283	0.0250	No
23	Cited2	2783	0.282	0.0328	No
24	Sdc2	2876	0.275	0.0331	No
25	Hmmr	3093	0.255	0.0228	No
26	B3gat3	3127	0.253	0.0273	No
27	Aldh9a1	3139	0.252	0.0336	No
28	Pgls	3244	0.244	0.0321	No
29	Cenpa	3276	0.241	0.0364	No
30	Gpc1	3278	0.241	0.0432	No
31	Nasp	3339	0.236	0.0451	No
32	Hspa5	3519	0.221	0.0367	No
33	Gfus	3581	0.217	0.0379	No
34	Med24	3725	0.206	0.0321	No
35	Casp6	3864	0.194	0.0264	No
36	P4ha1	4033	0.178	0.0177	No
37	Polr3k	4037	0.178	0.0226	No
38	B4galt7	4091	0.174	0.0232	No
39	Hax1	4096	0.174	0.0279	No
40	Gpc3	4108	0.174	0.0319	No
41	Nsdhl	4168	0.170	0.0320	No
42	Pgam1	4227	0.166	0.0320	No
43	Qsox1	4362	0.155	0.0254	No
44	Pfkfb1	4483	0.146	0.0198	No
45	Mdh1	4580	0.138	0.0159	No
46	Vldlr	4621	0.135	0.0164	No
47	Sdhc	4655	0.132	0.0175	No
48	Ndst3	4763	0.123	0.0123	No
49	Depdc1a	4973	0.110	-0.0017	No
50	Ak4	5081	0.107	-0.0074	No
51	Pygl	5104	0.105	-0.0062	No
52	Ndufv3	5220	0.095	-0.0129	No
53	Zfp292	5363	0.084	-0.0221	No
54	Sap30	5393	0.081	-0.0222	No
55	B3gnt3	5620	0.066	-0.0388	No
56	Gusb	5778	0.054	-0.0501	No
57	Fam162a	5828	0.051	-0.0526	No
58	Akr1a1	5854	0.050	-0.0532	No
59	Prps1	5928	0.044	-0.0579	No
60	Bpnt1	5938	0.044	-0.0574	No
61	Tpi1	6106	0.032	-0.0702	No
62	Egln3	6184	0.025	-0.0758	No
63	Aldoa	6191	0.025	-0.0755	No
64	Mertk	6253	0.020	-0.0800	No
65	Irs2	6431	0.007	-0.0942	No
66	Gclc	6441	0.006	-0.0948	No
67	Hdlbp	6483	0.003	-0.0981	No
68	Copb2	6608	-0.002	-0.1081	No
69	Idh1	6625	-0.004	-0.1093	No
70	Cln6	6648	-0.005	-0.1110	No
71	Chst2	6685	-0.008	-0.1137	No
72	Txn1	6739	-0.012	-0.1177	No
73	Pdk3	6754	-0.013	-0.1185	No
74	Ppp2cb	6909	-0.024	-0.1304	No
75	Pmm2	6928	-0.026	-0.1311	No
76	Gne	7350	-0.058	-0.1639	No
77	Cyb5a	7599	-0.077	-0.1820	No
78	Hk2	7607	-0.078	-0.1804	No
79	Capn5	7612	-0.078	-0.1784	No
80	Aldh7a1	7620	-0.080	-0.1767	No
81	Tgfa	7737	-0.088	-0.1837	No
82	Slc35a3	8189	-0.120	-0.2172	No
83	Gnpda1	8213	-0.122	-0.2156	No
84	Mdh2	8561	-0.152	-0.2396	No
85	Isg20	8629	-0.157	-0.2406	No
86	Rpe	8686	-0.161	-0.2406	No
87	Eno2	8747	-0.163	-0.2409	Yes
88	Me2	8794	-0.166	-0.2399	Yes
89	Pfkp	8805	-0.168	-0.2359	Yes
90	Galk2	8831	-0.170	-0.2331	Yes
91	Paxip1	8890	-0.175	-0.2328	Yes
92	Ugp2	8957	-0.182	-0.2330	Yes
93	Agrn	8962	-0.182	-0.2281	Yes
94	Kif2a	9080	-0.191	-0.2322	Yes
95	Rbck1	9094	-0.192	-0.2278	Yes
96	Ext1	9186	-0.202	-0.2295	Yes
97	Plod1	9310	-0.213	-0.2334	Yes
98	Srd5a3	9338	-0.215	-0.2295	Yes
99	Gpr87	9439	-0.222	-0.2313	Yes
100	Glce	9471	-0.224	-0.2274	Yes
101	Glrx	9642	-0.241	-0.2345	Yes
102	Sdc3	9647	-0.242	-0.2279	Yes
103	Chpf2	9673	-0.244	-0.2229	Yes
104	Plod2	9676	-0.244	-0.2161	Yes
105	Tgfbi	9709	-0.248	-0.2117	Yes
106	Idua	9845	-0.259	-0.2153	Yes
107	Gys1	9883	-0.262	-0.2108	Yes
108	Ppia	9909	-0.264	-0.2053	Yes
109	B4galt1	9923	-0.266	-0.1988	Yes
110	Gfpt1	9936	-0.268	-0.1921	Yes
111	Mpi	10000	-0.274	-0.1894	Yes
112	Me1	10001	-0.274	-0.1816	Yes
113	Pygb	10051	-0.278	-0.1776	Yes
114	Vcan	10082	-0.282	-0.1720	Yes
115	Pcx	10143	-0.287	-0.1687	Yes
116	Mif	10178	-0.289	-0.1632	Yes
117	Dsc2	10272	-0.299	-0.1623	Yes
118	Ero1a	10347	-0.309	-0.1595	Yes
119	Chst12	10355	-0.309	-0.1513	Yes
120	Pkm	10389	-0.312	-0.1450	Yes
121	Ecd	10416	-0.315	-0.1382	Yes
122	Xylt2	10436	-0.317	-0.1307	Yes
123	Ldha	10470	-0.321	-0.1242	Yes
124	Psmc4	10513	-0.327	-0.1183	Yes
125	Nanp	10548	-0.328	-0.1116	Yes
126	Gmppa	10659	-0.343	-0.1109	Yes
127	Met	10727	-0.352	-0.1063	Yes
128	Ankzf1	10744	-0.353	-0.0975	Yes
129	Sod1	11016	-0.388	-0.1086	Yes
130	Homer1	11072	-0.397	-0.1017	Yes
131	Aurka	11293	-0.426	-0.1076	Yes
132	Cd44	11459	-0.452	-0.1081	Yes
133	Spag4	11539	-0.465	-0.1013	Yes
134	Hs6st2	11567	-0.469	-0.0901	Yes
135	Pkp2	11643	-0.486	-0.0823	Yes
136	B4galt4	11651	-0.487	-0.0690	Yes
137	Pgk1	11670	-0.490	-0.0564	Yes
138	Ext2	11725	-0.506	-0.0464	Yes
139	Slc25a10	11832	-0.530	-0.0399	Yes
140	Tpst1	11855	-0.537	-0.0263	Yes
141	Hs2st1	11916	-0.556	-0.0153	Yes
142	Vegfa	12029	-0.594	-0.0075	Yes
143	Alg1	12033	-0.596	0.0093	Yes
144	Pam	12070	-0.617	0.0240	Yes