Details for gene set HALLMARK_EPITHELIAL_MESENCHYMAL

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group4.HSC_Pheno.cls#Group2_versus_Group4_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION
Enrichment Score (ES)	0.25364238
Normalized Enrichment Score (NES)	1.1134888
Nominal p-value	0.2237354
FDR q-value	0.7168491
FWER p-Value	0.962

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Itgav	213	0.728	0.0150	Yes
2	Anpep	436	0.615	0.0243	Yes
3	Dst	491	0.595	0.0463	Yes
4	Tgfb1	514	0.589	0.0707	Yes
5	Lrp1	908	0.498	0.0608	Yes
6	Il15	957	0.488	0.0786	Yes
7	Cadm1	1254	0.443	0.0742	Yes
8	Gadd45b	1398	0.423	0.0814	Yes
9	Pvr	1625	0.394	0.0805	Yes
10	Serpinh1	1635	0.393	0.0972	Yes
11	Tpm1	1695	0.386	0.1096	Yes
12	Vegfc	1768	0.378	0.1205	Yes
13	Tgfbr3	1779	0.377	0.1364	Yes
14	Itgb3	2153	0.340	0.1211	Yes
15	Abi3bp	2200	0.335	0.1323	Yes
16	Lama3	2235	0.332	0.1443	Yes
17	Fzd8	2248	0.332	0.1581	Yes
18	Ecm1	2373	0.320	0.1622	Yes
19	Plaur	2389	0.319	0.1751	Yes
20	Magee1	2468	0.310	0.1826	Yes
21	Lgals1	2473	0.310	0.1960	Yes
22	Cap2	2486	0.310	0.2089	Yes
23	Fap	2496	0.309	0.2219	Yes
24	Rhob	2655	0.294	0.2221	Yes
25	Emp3	2696	0.292	0.2318	Yes
26	Timp3	2805	0.280	0.2355	Yes
27	Lamc1	2980	0.266	0.2331	Yes
28	Jun	3026	0.262	0.2411	Yes
29	Slit2	3166	0.249	0.2408	Yes
30	Calu	3177	0.248	0.2511	Yes
31	Gpc1	3278	0.241	0.2536	Yes
32	Sgcb	3410	0.230	0.2532	No
33	Plod3	3637	0.214	0.2443	No
34	Bgn	3768	0.202	0.2427	No
35	Col4a1	3833	0.196	0.2462	No
36	Qsox1	4362	0.155	0.2101	No
37	Sat1	4521	0.143	0.2036	No
38	Ecm2	4574	0.138	0.2055	No
39	Col4a2	4857	0.117	0.1877	No
40	Tpm2	5074	0.107	0.1749	No
41	Tpm4	5149	0.101	0.1734	No
42	Glipr1	5829	0.051	0.1203	No
43	Mmp2	5894	0.047	0.1172	No
44	Flna	6018	0.038	0.1089	No
45	P3h1	6209	0.024	0.0944	No
46	Mmp14	6272	0.018	0.0902	No
47	Vim	6487	0.003	0.0729	No
48	Mcm7	6718	-0.010	0.0546	No
49	Bmp1	6824	-0.018	0.0469	No
50	Gem	6847	-0.019	0.0459	No
51	Pdgfrb	7018	-0.031	0.0334	No
52	Itga2	7109	-0.038	0.0278	No
53	Sntb1	7225	-0.047	0.0205	No
54	Copa	7261	-0.050	0.0199	No
55	Inhba	7376	-0.061	0.0133	No
56	Sfrp1	7768	-0.090	-0.0146	No
57	Colgalt1	8140	-0.117	-0.0396	No
58	Pmepa1	8150	-0.117	-0.0351	No
59	Itgb1	8219	-0.123	-0.0352	No
60	Ppib	8592	-0.154	-0.0586	No
61	Fas	8681	-0.161	-0.0587	No
62	Eno2	8747	-0.163	-0.0567	No
63	Fstl1	8811	-0.168	-0.0544	No
64	Wipf1	8956	-0.182	-0.0580	No
65	Basp1	9177	-0.201	-0.0670	No
66	Col1a2	9247	-0.208	-0.0634	No
67	Capg	9288	-0.212	-0.0573	No
68	Plod1	9310	-0.213	-0.0495	No
69	Plod2	9676	-0.244	-0.0683	No
70	Tgfbi	9709	-0.248	-0.0599	No
71	Col16a1	9901	-0.263	-0.0638	No
72	Tnfaip3	9927	-0.267	-0.0540	No
73	Gja1	9933	-0.268	-0.0425	No
74	Vcan	10082	-0.282	-0.0420	No
75	Notch2	10096	-0.282	-0.0305	No
76	Igfbp4	10336	-0.307	-0.0363	No
77	Itga5	10399	-0.313	-0.0274	No
78	Fuca1	10783	-0.358	-0.0427	No
79	Mylk	10953	-0.382	-0.0395	No
80	Fermt2	10969	-0.383	-0.0237	No
81	Sdc4	11290	-0.426	-0.0308	No
82	Cd44	11459	-0.452	-0.0244	No
83	Thbs1	11535	-0.464	-0.0099	No
84	Fbn1	11906	-0.552	-0.0155	No
85	Tgm2	12017	-0.588	0.0017	No
86	Vegfa	12029	-0.594	0.0272	No