Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group4.HSC_Pheno.cls#Group2_versus_Group4_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.19628347
Normalized Enrichment Score (NES)	-0.8878094
Nominal p-value	0.71666664
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Vps37b	85	0.889	0.0175	No
2	Ddb2	86	0.886	0.0418	No
3	Rfc3	515	0.589	0.0230	No
4	Pcna	706	0.540	0.0223	No
5	Bcam	802	0.522	0.0288	No
6	Zfp707	805	0.521	0.0430	No
7	Lig1	858	0.509	0.0527	No
8	Polr1h	900	0.499	0.0631	No
9	Zwint	926	0.493	0.0746	No
10	Vps37d	993	0.483	0.0824	No
11	Rfc4	1118	0.462	0.0850	No
12	Sdcbp	1136	0.459	0.0962	No
13	Polr3c	1148	0.457	0.1078	No
14	Rad51	1199	0.449	0.1161	No
15	Smad5	1355	0.429	0.1152	No
16	Taf10	1396	0.423	0.1235	No
17	Rpa2	1521	0.408	0.1246	No
18	Dguok	1523	0.408	0.1357	No
19	Cant1	1548	0.405	0.1449	No
20	Usp11	1698	0.386	0.1433	No
21	Polr3gl	1716	0.383	0.1524	No
22	Tyms	1905	0.363	0.1470	No
23	Adrm1	1927	0.362	0.1552	No
24	Nelfcd	2090	0.345	0.1515	No
25	Ercc4	2093	0.345	0.1608	No
26	Cox17	2162	0.339	0.1645	No
27	Pom121	2268	0.330	0.1650	No
28	Ak3	2554	0.304	0.1500	No
29	Ddb1	3265	0.242	0.0986	No
30	Supt5	3271	0.242	0.1049	No
31	Mrpl40	3297	0.239	0.1094	No
32	Cmpk2	3351	0.235	0.1115	No
33	Polr2a	3381	0.232	0.1155	No
34	Cstf3	3522	0.221	0.1101	No
35	Nelfb	3778	0.201	0.0948	No
36	Ak1	3848	0.195	0.0945	No
37	Gtf2b	4070	0.175	0.0812	No
38	Polr2h	4136	0.173	0.0807	No
39	Polb	4203	0.168	0.0799	No
40	Supt4a	4287	0.161	0.0775	No
41	Polr2e	4352	0.156	0.0766	No
42	Nme1	4354	0.156	0.0807	No
43	Nt5c	4390	0.152	0.0821	No
44	Dgcr8	4394	0.152	0.0860	No
45	Pde4b	4757	0.124	0.0598	No
46	Ercc5	4868	0.116	0.0540	No
47	Aaas	4921	0.114	0.0528	No
48	Umps	4936	0.113	0.0548	No
49	Taf9	4994	0.110	0.0532	No
50	Taf13	5054	0.108	0.0513	No
51	Snapc5	5263	0.092	0.0368	No
52	Rpa3	5312	0.088	0.0353	No
53	Nt5c3	5468	0.077	0.0247	No
54	Sec61a1	5542	0.071	0.0207	No
55	Polh	5562	0.070	0.0211	No
56	Dctn4	5768	0.055	0.0058	No
57	Pnp	5935	0.044	-0.0066	No
58	Tsg101	5967	0.042	-0.0079	No
59	Adcy6	6003	0.039	-0.0097	No
60	Arl6ip1	6066	0.034	-0.0139	No
61	Gtf2a2	6110	0.031	-0.0165	No
62	Taf1c	6187	0.025	-0.0220	No
63	Rala	6198	0.024	-0.0222	No
64	Rnmt	6357	0.013	-0.0348	No
65	Rae1	6525	0.000	-0.0484	No
66	Brf2	6535	0.000	-0.0492	No
67	Dut	6728	-0.011	-0.0645	No
68	Polr2g	6770	-0.014	-0.0675	No
69	Tk2	6800	-0.017	-0.0694	No
70	Clp1	6908	-0.024	-0.0775	No
71	Ncbp2	6929	-0.026	-0.0784	No
72	Taf6	7054	-0.033	-0.0877	No
73	Upf3b	7103	-0.037	-0.0906	No
74	Ada	7128	-0.039	-0.0915	No
75	Bcap31	7163	-0.042	-0.0931	No
76	Gtf2h5	7292	-0.054	-0.1021	No
77	Npr2	7333	-0.057	-0.1038	No
78	Nelfe	7441	-0.065	-0.1108	No
79	Hcls1	7746	-0.089	-0.1332	No
80	Nme4	7785	-0.092	-0.1338	No
81	Gtf2h1	7856	-0.096	-0.1369	No
82	Rrm2b	7858	-0.096	-0.1343	No
83	Rbx1	7878	-0.098	-0.1332	No
84	Stx3	7887	-0.099	-0.1311	No
85	Gmpr2	7907	-0.100	-0.1299	No
86	Mpg	7950	-0.103	-0.1305	No
87	Alyref	8151	-0.117	-0.1437	No
88	Trp53	8225	-0.124	-0.1463	No
89	Gtf2f1	8521	-0.149	-0.1663	No
90	Eif1b	8546	-0.151	-0.1641	No
91	Eloa	8586	-0.154	-0.1631	No
92	Gtf3c5	8736	-0.162	-0.1709	No
93	Rfc5	8751	-0.163	-0.1675	No
94	Ssrp1	8771	-0.164	-0.1646	No
95	Ercc1	8775	-0.165	-0.1603	No
96	Polr2j	8783	-0.165	-0.1563	No
97	Vps28	8840	-0.171	-0.1562	No
98	Polr1d	8842	-0.171	-0.1516	No
99	Pola2	9012	-0.187	-0.1602	No
100	Rad52	9125	-0.195	-0.1640	No
101	Nudt9	9126	-0.195	-0.1587	No
102	Poll	9217	-0.205	-0.1604	No
103	Polr2c	9364	-0.215	-0.1665	No
104	Nudt21	9461	-0.223	-0.1682	No
105	Sf3a3	9533	-0.230	-0.1677	No
106	Srsf6	9626	-0.239	-0.1686	No
107	Pold3	9689	-0.246	-0.1669	No
108	Polr1c	9696	-0.247	-0.1606	No
109	Ercc8	9760	-0.253	-0.1589	No
110	Nfx1	10062	-0.280	-0.1758	No
111	Guk1	10142	-0.287	-0.1744	No
112	Pold4	10411	-0.315	-0.1876	Yes
113	Rev3l	10500	-0.325	-0.1859	Yes
114	Cetn2	10573	-0.332	-0.1827	Yes
115	Aprt	10683	-0.346	-0.1821	Yes
116	Ercc3	10754	-0.354	-0.1781	Yes
117	Impdh2	10810	-0.361	-0.1727	Yes
118	Snapc4	10832	-0.365	-0.1644	Yes
119	Tarbp2	10871	-0.370	-0.1573	Yes
120	Edf1	10975	-0.384	-0.1552	Yes
121	Rfc2	11028	-0.390	-0.1487	Yes
122	Pole4	11166	-0.408	-0.1487	Yes
123	Polr2f	11199	-0.412	-0.1400	Yes
124	Gsdme	11301	-0.426	-0.1366	Yes
125	Itpa	11303	-0.427	-0.1249	Yes
126	Dad1	11342	-0.430	-0.1162	Yes
127	Surf1	11412	-0.443	-0.1097	Yes
128	Xpc	11526	-0.463	-0.1062	Yes
129	Gpx4	11529	-0.464	-0.0937	Yes
130	Ercc2	11659	-0.488	-0.0908	Yes
131	Ago4	11708	-0.502	-0.0809	Yes
132	Prim1	11709	-0.502	-0.0671	Yes
133	Pola1	11734	-0.508	-0.0551	Yes
134	Mpc2	11753	-0.512	-0.0425	Yes
135	Gtf2h3	11955	-0.568	-0.0434	Yes
136	Taf12	12051	-0.608	-0.0344	Yes
137	Pold1	12101	-0.633	-0.0211	Yes
138	Ell	12213	-0.704	-0.0108	Yes
139	Fen1	12294	-0.837	0.0056	Yes