Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group3.HSC_Pheno.cls#Group2_versus_Group3_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	1
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.38580158
Normalized Enrichment Score (NES)	1.5420567
Nominal p-value	0.006263048
FDR q-value	0.20676805
FWER p-Value	0.183

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Zfp36	28	1.031	0.0227	Yes
2	Fosb	49	0.955	0.0443	Yes
3	Abca1	50	0.947	0.0672	Yes
4	Birc3	85	0.873	0.0856	Yes
5	Fos	134	0.795	0.1010	Yes
6	Plpp3	148	0.785	0.1190	Yes
7	Mxd1	185	0.751	0.1343	Yes
8	Jun	219	0.717	0.1490	Yes
9	Mcl1	223	0.715	0.1661	Yes
10	Sat1	292	0.672	0.1768	Yes
11	Rhob	306	0.661	0.1918	Yes
12	Bhlhe40	315	0.658	0.2071	Yes
13	Pnrc1	405	0.615	0.2148	Yes
14	Ier2	406	0.615	0.2297	Yes
15	Trip10	421	0.609	0.2433	Yes
16	Ppp1r15a	425	0.607	0.2578	Yes
17	Junb	513	0.576	0.2647	Yes
18	Pdlim5	551	0.563	0.2753	Yes
19	Hbegf	652	0.533	0.2801	Yes
20	Btg1	821	0.494	0.2783	Yes
21	Nampt	855	0.487	0.2875	Yes
22	Socs3	867	0.485	0.2983	Yes
23	Klf10	961	0.467	0.3021	Yes
24	Klf2	1051	0.449	0.3057	Yes
25	Jag1	1066	0.446	0.3154	Yes
26	Trib1	1125	0.436	0.3212	Yes
27	Klf4	1166	0.428	0.3283	Yes
28	Irf1	1170	0.427	0.3384	Yes
29	Il6st	1355	0.400	0.3331	Yes
30	Nfkbia	1383	0.397	0.3405	Yes
31	Bcl3	1387	0.396	0.3498	Yes
32	Nfkb1	1508	0.383	0.3493	Yes
33	Rigi	1660	0.365	0.3458	Yes
34	Maff	1687	0.362	0.3525	Yes
35	Klf9	1743	0.359	0.3567	Yes
36	Per1	1767	0.356	0.3634	Yes
37	Ifih1	1793	0.353	0.3699	Yes
38	Map2k3	1809	0.350	0.3772	Yes
39	Ptger4	1895	0.341	0.3786	Yes
40	Plaur	1908	0.339	0.3858	Yes
41	Gch1	2022	0.328	0.3845	No
42	Gpr183	2444	0.279	0.3568	No
43	Slc2a3	2511	0.271	0.3580	No
44	Pde4b	2521	0.270	0.3638	No
45	Tnip1	2544	0.268	0.3685	No
46	Plk2	2565	0.266	0.3734	No
47	Birc2	2567	0.266	0.3797	No
48	Marcks	2635	0.259	0.3805	No
49	Tgif1	2710	0.252	0.3806	No
50	Tnfaip2	2862	0.238	0.3740	No
51	Ccnl1	3015	0.223	0.3670	No
52	Dnajb4	3124	0.214	0.3634	No
53	Dusp1	3506	0.179	0.3366	No
54	Rela	3629	0.174	0.3308	No
55	Klf6	3650	0.173	0.3333	No
56	Pmepa1	3807	0.159	0.3244	No
57	Inhba	3930	0.150	0.3181	No
58	Ifit2	3956	0.148	0.3196	No
59	Rnf19b	4109	0.137	0.3105	No
60	Tnfaip8	4142	0.134	0.3112	No
61	Map3k8	4555	0.106	0.2800	No
62	Il18	4716	0.094	0.2692	No
63	Fosl2	4767	0.089	0.2673	No
64	Zc3h12a	4835	0.084	0.2639	No
65	Lamb3	4957	0.076	0.2558	No
66	Rcan1	4960	0.076	0.2575	No
67	Il15ra	5041	0.069	0.2526	No
68	Nfkbie	5089	0.064	0.2504	No
69	Nr4a1	5263	0.053	0.2375	No
70	Nfe2l2	5339	0.048	0.2325	No
71	Csf1	5382	0.044	0.2302	No
72	Serpinb8	5433	0.040	0.2270	No
73	Irs2	5536	0.033	0.2195	No
74	Slc16a6	5834	0.013	0.1955	No
75	Tnip2	5850	0.012	0.1946	No
76	Tsc22d1	5925	0.007	0.1887	No
77	Ccrl2	6038	0.000	0.1795	No
78	Bcl6	6179	-0.007	0.1683	No
79	Cd44	6228	-0.010	0.1646	No
80	Kdm6b	6230	-0.011	0.1648	No
81	Ptpre	6291	-0.014	0.1602	No
82	Icosl	6302	-0.015	0.1597	No
83	Kynu	6321	-0.016	0.1587	No
84	Eif1	6466	-0.026	0.1475	No
85	Ier3	6474	-0.027	0.1476	No
86	Dusp4	6781	-0.049	0.1238	No
87	Nfat5	6890	-0.057	0.1163	No
88	Btg3	7045	-0.069	0.1054	No
89	Dennd5a	7114	-0.073	0.1016	No
90	Ninj1	7185	-0.078	0.0978	No
91	Nfkb2	7189	-0.078	0.0994	No
92	Gem	7306	-0.089	0.0921	No
93	Panx1	7379	-0.095	0.0885	No
94	Tlr2	7441	-0.100	0.0860	No
95	Gadd45b	7747	-0.124	0.0640	No
96	Icam1	7761	-0.125	0.0660	No
97	Nr4a2	7842	-0.131	0.0626	No
98	Traf1	7880	-0.134	0.0629	No
99	Ripk2	8003	-0.144	0.0564	No
100	Efna1	8028	-0.146	0.0579	No
101	Pfkfb3	8139	-0.154	0.0527	No
102	Atp2b1	8336	-0.170	0.0408	No
103	Rel	8384	-0.174	0.0412	No
104	Myc	8610	-0.191	0.0274	No
105	Litaf	8648	-0.194	0.0291	No
106	Sqstm1	8733	-0.198	0.0270	No
107	Tiparp	8763	-0.200	0.0295	No
108	Sod2	8812	-0.205	0.0305	No
109	Ehd1	8815	-0.206	0.0354	No
110	Snn	8830	-0.207	0.0392	No
111	Stat5a	8980	-0.217	0.0323	No
112	Plek	9227	-0.237	0.0179	No
113	Vegfa	9324	-0.245	0.0160	No
114	Cebpd	9411	-0.251	0.0151	No
115	Zbtb10	9467	-0.256	0.0168	No
116	Egr1	9550	-0.264	0.0165	No
117	Clcf1	9575	-0.267	0.0210	No
118	B4galt5	9648	-0.272	0.0217	No
119	Tnfaip3	9668	-0.274	0.0268	No
120	Tank	9828	-0.288	0.0208	No
121	Dram1	9840	-0.289	0.0269	No
122	Ets2	10203	-0.318	0.0050	No
123	Ier5	10220	-0.319	0.0115	No
124	Ldlr	10478	-0.346	-0.0012	No
125	Dusp2	10607	-0.360	-0.0029	No
126	Fut4	10634	-0.362	0.0038	No
127	Cflar	10653	-0.364	0.0111	No
128	Yrdc	10682	-0.368	0.0178	No
129	Dusp5	11158	-0.437	-0.0105	No
130	Relb	11180	-0.441	-0.0015	No
131	Gfpt2	11236	-0.449	0.0049	No
132	Sdc4	11242	-0.450	0.0154	No
133	B4galt1	11474	-0.488	0.0084	No
134	Smad3	11806	-0.566	-0.0050	No
135	Tap1	12036	-0.662	-0.0076	No
136	Ifngr2	12120	-0.699	0.0025	No
137	Ccnd1	12137	-0.711	0.0185	No