Details for gene set HALLMARK_REACTIVE_OXYGEN_SPECIES

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group3.HSC_Pheno.cls#Group2_versus_Group3_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)	-0.2606799
Normalized Enrichment Score (NES)	-0.97095966
Nominal p-value	0.51417005
FDR q-value	0.65952533
FWER p-Value	0.998

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	G6pdx	512	0.576	0.0080	No
2	Junb	513	0.576	0.0576	No
3	Gclm	1023	0.454	0.0553	No
4	Lamtor5	1582	0.375	0.0422	No
5	Prdx2	1620	0.369	0.0710	No
6	Prdx6	1956	0.333	0.0724	No
7	Srxn1	2172	0.310	0.0817	No
8	Mbp	3417	0.188	-0.0032	No
9	Ndufa6	3434	0.186	0.0115	No
10	Gsr	3481	0.182	0.0234	No
11	Ipcef1	3638	0.173	0.0257	No
12	Hhex	3716	0.166	0.0337	No
13	Lsp1	4052	0.141	0.0186	No
14	Gclc	4184	0.130	0.0192	No
15	Txn1	4411	0.113	0.0105	No
16	Stk25	4643	0.099	0.0003	No
17	Fes	4758	0.090	-0.0012	No
18	Prdx1	5626	0.027	-0.0693	No
19	Ndufs2	5767	0.017	-0.0792	No
20	Txnrd1	6460	-0.026	-0.1332	No
21	Prnp	6666	-0.042	-0.1462	No
22	Pdlim1	6714	-0.045	-0.1462	No
23	Atox1	7251	-0.084	-0.1825	No
24	Txnrd2	7260	-0.085	-0.1758	No
25	Sbno2	7348	-0.093	-0.1749	No
26	Cat	8217	-0.160	-0.2316	No
27	Ercc2	8458	-0.179	-0.2356	No
28	Hmox2	8768	-0.201	-0.2434	Yes
29	Ptpa	8809	-0.205	-0.2290	Yes
30	Sod2	8812	-0.205	-0.2115	Yes
31	Egln2	8955	-0.214	-0.2046	Yes
32	Glrx2	9077	-0.225	-0.1950	Yes
33	Scaf4	9155	-0.232	-0.1813	Yes
34	Selenos	9235	-0.238	-0.1672	Yes
35	Gpx3	9580	-0.267	-0.1722	Yes
36	Cdkn2d	9959	-0.297	-0.1774	Yes
37	Oxsr1	10138	-0.313	-0.1649	Yes
38	Pfkp	10146	-0.314	-0.1384	Yes
39	Gpx4	10210	-0.319	-0.1161	Yes
40	Msra	10335	-0.330	-0.0978	Yes
41	Prdx4	10610	-0.361	-0.0890	Yes
42	Mpo	10988	-0.414	-0.0840	Yes
43	Glrx	11097	-0.428	-0.0559	Yes
44	Ftl1	11444	-0.483	-0.0424	Yes
45	Sod1	12003	-0.643	-0.0323	Yes
46	Abcc1	12144	-0.714	0.0178	Yes