Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group3.HSC_Pheno.cls#Group2_versus_Group3_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_GLYCOLYSIS
Enrichment Score (ES)	-0.23835358
Normalized Enrichment Score (NES)	-1.0736115
Nominal p-value	0.3084886
FDR q-value	0.64826554
FWER p-Value	0.996

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Fut8	10	1.118	0.0296	No
2	G6pdx	512	0.576	0.0043	No
3	Gpc1	515	0.575	0.0198	No
4	Pgls	568	0.558	0.0308	No
5	Tgfa	580	0.555	0.0450	No
6	Taldo1	604	0.548	0.0581	No
7	Cyb5a	724	0.513	0.0623	No
8	Pygb	1088	0.442	0.0447	No
9	Pdk3	1172	0.427	0.0495	No
10	Fkbp4	1175	0.426	0.0610	No
11	Copb2	1245	0.419	0.0667	No
12	Hdlbp	1284	0.411	0.0748	No
13	Mdh1	1380	0.397	0.0779	No
14	Paxip1	1480	0.388	0.0803	No
15	Galk1	1590	0.374	0.0816	No
16	Hs6st2	1888	0.342	0.0666	No
17	Dld	2096	0.320	0.0584	No
18	Mertk	2242	0.304	0.0548	No
19	Cenpa	2251	0.303	0.0624	No
20	Agl	2261	0.302	0.0699	No
21	Gfpt1	2362	0.289	0.0696	No
22	Gfus	2364	0.289	0.0774	No
23	Ak4	2410	0.283	0.0814	No
24	Pygl	2473	0.277	0.0839	No
25	Ppp2cb	2800	0.245	0.0639	No
26	Tgfbi	3039	0.220	0.0504	No
27	Homer1	3075	0.218	0.0535	No
28	Pgk1	3183	0.207	0.0504	No
29	Sdc2	3246	0.201	0.0508	No
30	Ak3	3249	0.201	0.0561	No
31	Sdhc	3374	0.190	0.0511	No
32	Polr3k	3404	0.189	0.0539	No
33	Ankzf1	3457	0.184	0.0547	No
34	Mxi1	3478	0.182	0.0580	No
35	Chst2	3538	0.177	0.0580	No
36	Cited2	3550	0.177	0.0619	No
37	Ugp2	3913	0.151	0.0364	No
38	Stmn1	4012	0.143	0.0323	No
39	Med24	4037	0.142	0.0342	No
40	P4ha1	4050	0.141	0.0371	No
41	Pkm	4071	0.140	0.0392	No
42	Psmc4	4126	0.135	0.0385	No
43	B3gat3	4143	0.134	0.0408	No
44	Gclc	4184	0.130	0.0411	No
45	Tpi1	4241	0.125	0.0400	No
46	Slc35a3	4274	0.123	0.0407	No
47	Plod2	4296	0.121	0.0423	No
48	Mdh2	4334	0.118	0.0425	No
49	Lhpp	4352	0.117	0.0443	No
50	Txn1	4411	0.113	0.0426	No
51	Fam162a	4696	0.096	0.0220	No
52	Arpp19	4697	0.096	0.0246	No
53	Ddit4	4785	0.088	0.0199	No
54	Prps1	4901	0.080	0.0126	No
55	Ext2	4924	0.078	0.0129	No
56	Rbck1	4950	0.077	0.0130	No
57	Aldh9a1	5074	0.066	0.0047	No
58	Irs2	5536	0.033	-0.0321	No
59	Pfkfb1	5559	0.031	-0.0331	No
60	Met	5620	0.027	-0.0372	No
61	Idh1	5656	0.025	-0.0394	No
62	Vldlr	5681	0.023	-0.0408	No
63	Aldoa	5710	0.021	-0.0425	No
64	Kif2a	5845	0.012	-0.0531	No
65	Cog2	5872	0.011	-0.0550	No
66	Qsox1	5896	0.009	-0.0566	No
67	Gpr87	6043	0.000	-0.0685	No
68	Nsdhl	6139	-0.004	-0.0762	No
69	Cd44	6228	-0.010	-0.0831	No
70	Me2	6385	-0.020	-0.0953	No
71	Ndufv3	6458	-0.025	-0.1005	No
72	Cxcr4	6464	-0.026	-0.1002	No
73	Ier3	6474	-0.027	-0.1002	No
74	Pgam1	6559	-0.034	-0.1062	No
75	B3gnt3	6635	-0.039	-0.1113	No
76	Phka2	6663	-0.042	-0.1123	No
77	Casp6	6701	-0.044	-0.1142	No
78	Akr1a1	6862	-0.054	-0.1258	No
79	Hs2st1	7030	-0.067	-0.1376	No
80	Hax1	7056	-0.069	-0.1378	No
81	Ext1	7119	-0.073	-0.1408	No
82	Sap30	7346	-0.093	-0.1568	No
83	Ndst3	7476	-0.103	-0.1645	No
84	Idua	7494	-0.104	-0.1631	No
85	Glce	7514	-0.106	-0.1618	No
86	Got1	7634	-0.115	-0.1684	No
87	Chst12	7875	-0.133	-0.1844	No
88	Pkp2	8262	-0.165	-0.2115	No
89	Slc25a13	8293	-0.167	-0.2094	No
90	Ldha	8313	-0.168	-0.2064	No
91	Eno2	8328	-0.169	-0.2029	No
92	Ppia	8448	-0.178	-0.2078	No
93	Rpe	8577	-0.188	-0.2131	No
94	Xylt2	8593	-0.190	-0.2092	No
95	Spag4	8669	-0.194	-0.2100	No
96	Mif	8739	-0.198	-0.2103	No
97	Isg20	9083	-0.226	-0.2322	Yes
98	Aldh7a1	9116	-0.229	-0.2286	Yes
99	Sdc3	9139	-0.230	-0.2241	Yes
100	Nasp	9166	-0.233	-0.2199	Yes
101	Zfp292	9185	-0.234	-0.2150	Yes
102	Hk2	9269	-0.241	-0.2152	Yes
103	Vegfa	9324	-0.245	-0.2130	Yes
104	Hmmr	9376	-0.248	-0.2104	Yes
105	Hspa5	9645	-0.272	-0.2249	Yes
106	Chpf2	9671	-0.275	-0.2195	Yes
107	Gne	9727	-0.280	-0.2163	Yes
108	Vcan	9780	-0.285	-0.2128	Yes
109	Bpnt1	9825	-0.288	-0.2086	Yes
110	Got2	10066	-0.306	-0.2199	Yes
111	Pcx	10103	-0.310	-0.2144	Yes
112	Cdk1	10105	-0.310	-0.2060	Yes
113	Ero1a	10134	-0.313	-0.1998	Yes
114	Pfkp	10146	-0.314	-0.1921	Yes
115	Mpi	10216	-0.319	-0.1891	Yes
116	Dsc2	10250	-0.322	-0.1830	Yes
117	Pgm2	10259	-0.323	-0.1749	Yes
118	Gmppa	10260	-0.323	-0.1661	Yes
119	Plod1	10277	-0.325	-0.1585	Yes
120	Gpc3	10282	-0.325	-0.1500	Yes
121	Me1	10399	-0.336	-0.1503	Yes
122	Egln3	10437	-0.341	-0.1440	Yes
123	Gys1	10547	-0.353	-0.1433	Yes
124	Pmm2	10587	-0.358	-0.1368	Yes
125	Galk2	10622	-0.361	-0.1297	Yes
126	Capn5	10856	-0.393	-0.1381	Yes
127	Cln6	10967	-0.411	-0.1359	Yes
128	Agrn	11060	-0.423	-0.1319	Yes
129	Pam	11064	-0.423	-0.1206	Yes
130	Glrx	11097	-0.428	-0.1115	Yes
131	Tpst1	11108	-0.429	-0.1007	Yes
132	Gusb	11122	-0.431	-0.0900	Yes
133	Nanp	11171	-0.439	-0.0819	Yes
134	Aurka	11182	-0.441	-0.0707	Yes
135	Gnpda1	11454	-0.485	-0.0797	Yes
136	B4galt1	11474	-0.488	-0.0680	Yes
137	Ecd	11532	-0.498	-0.0590	Yes
138	Slc25a10	11686	-0.535	-0.0570	Yes
139	Depdc1a	11750	-0.551	-0.0471	Yes
140	B4galt4	11821	-0.570	-0.0373	Yes
141	Srd5a3	11884	-0.596	-0.0261	Yes
142	Sod1	12003	-0.643	-0.0182	Yes
143	B4galt7	12033	-0.659	-0.0027	Yes
144	Alg1	12348	-1.085	0.0012	Yes