Details for gene set HALLMARK_G2M

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group3.HSC_Pheno.cls#Group2_versus_Group3_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)	-0.34801438
Normalized Enrichment Score (NES)	-1.210825
Nominal p-value	0.12145749
FDR q-value	0.45562568
FWER p-Value	0.905

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Abl1	94	0.855	0.0093	No
2	Chmp1a	97	0.849	0.0259	No
3	Amd1	442	0.603	0.0097	No
4	Hnrnpd	520	0.574	0.0147	No
5	Smc1a	623	0.540	0.0171	No
6	Cdc27	725	0.513	0.0190	No
7	Ccnt1	754	0.508	0.0267	No
8	Dr1	891	0.481	0.0251	No
9	Tra2b	948	0.469	0.0298	No
10	Dmd	962	0.466	0.0380	No
11	Traip	1004	0.458	0.0438	No
12	Top1	1032	0.452	0.0505	No
13	Hspa8	1118	0.437	0.0522	No
14	Lig3	1243	0.419	0.0504	No
15	Prmt5	1277	0.413	0.0558	No
16	Bcl3	1387	0.396	0.0548	No
17	Bub3	1404	0.394	0.0613	No
18	Arid4a	1902	0.341	0.0272	No
19	Cenpa	2251	0.303	0.0047	No
20	Cdc25b	2279	0.300	0.0084	No
21	Hira	2358	0.290	0.0078	No
22	Marcks	2635	0.259	-0.0097	No
23	Egf	2695	0.253	-0.0096	No
24	Orc5	2732	0.250	-0.0076	No
25	Ythdc1	2892	0.235	-0.0159	No
26	Nsd2	2952	0.230	-0.0162	No
27	Tacc3	3132	0.213	-0.0267	No
28	Ewsr1	3225	0.203	-0.0302	No
29	E2f1	3439	0.185	-0.0440	No
30	Cul4a	3743	0.164	-0.0657	No
31	Sfpq	3750	0.163	-0.0629	No
32	Notch2	3895	0.152	-0.0717	No
33	Numa1	3974	0.147	-0.0752	No
34	Stmn1	4012	0.143	-0.0754	No
35	Rasal2	4201	0.129	-0.0883	No
36	Katna1	4262	0.124	-0.0907	No
37	Pml	4286	0.122	-0.0902	No
38	Ss18	4395	0.114	-0.0968	No
39	Ndc80	4608	0.102	-0.1122	No
40	Cbx1	4660	0.098	-0.1144	No
41	Cdkn1b	4739	0.092	-0.1190	No
42	Ddx39a	4748	0.091	-0.1179	No
43	Stag1	4818	0.086	-0.1218	No
44	Hif1a	4836	0.084	-0.1215	No
45	Wrn	4877	0.081	-0.1232	No
46	Mybl2	4905	0.079	-0.1239	No
47	Cul3	4993	0.072	-0.1296	No
48	H2az1	5037	0.069	-0.1317	No
49	Rad21	5456	0.038	-0.1653	No
50	Rad54l	5473	0.037	-0.1659	No
51	Kif5b	5509	0.035	-0.1680	No
52	Kif20b	5521	0.034	-0.1683	No
53	Meis1	5561	0.031	-0.1709	No
54	Kif4	5610	0.028	-0.1743	No
55	Bub1	5616	0.027	-0.1741	No
56	H2az2	5638	0.026	-0.1753	No
57	Rps6ka5	5709	0.021	-0.1807	No
58	Casp8ap2	5924	0.007	-0.1981	No
59	Sqle	5998	0.002	-0.2040	No
60	Srsf1	6153	-0.005	-0.2166	No
61	Slc7a1	6272	-0.013	-0.2260	No
62	Xpo1	6277	-0.013	-0.2261	No
63	Mcm6	6294	-0.015	-0.2271	No
64	Cdc45	6378	-0.020	-0.2335	No
65	Tgfb1	6512	-0.030	-0.2438	No
66	Pura	6554	-0.033	-0.2465	No
67	Lbr	6639	-0.039	-0.2527	No
68	Orc6	6656	-0.041	-0.2532	No
69	Cdc7	6826	-0.052	-0.2660	No
70	Odc1	7015	-0.066	-0.2801	No
71	Racgap1	7117	-0.073	-0.2870	No
72	Ezh2	7121	-0.074	-0.2857	No
73	Chaf1a	7179	-0.077	-0.2889	No
74	Suv39h1	7213	-0.080	-0.2900	No
75	Pole	7217	-0.081	-0.2886	No
76	Cdc20	7230	-0.082	-0.2880	No
77	Mcm2	7245	-0.084	-0.2875	No
78	Rad23b	7259	-0.085	-0.2869	No
79	Syncrip	7278	-0.086	-0.2866	No
80	Cdc25a	7343	-0.092	-0.2901	No
81	Sap30	7346	-0.093	-0.2884	No
82	Srsf2	7351	-0.093	-0.2869	No
83	Ube2s	7353	-0.094	-0.2851	No
84	Pttg1	7521	-0.106	-0.2967	No
85	Snrpd1	7529	-0.107	-0.2952	No
86	Nup50	7677	-0.119	-0.3049	No
87	E2f4	7680	-0.119	-0.3027	No
88	Cul5	7708	-0.121	-0.3025	No
89	Nup98	7808	-0.128	-0.3081	No
90	Mnat1	7852	-0.132	-0.3090	No
91	Cenpe	7960	-0.140	-0.3150	No
92	E2f3	7988	-0.142	-0.3144	No
93	Pafah1b1	8185	-0.157	-0.3273	No
94	Smarcc1	8245	-0.163	-0.3289	No
95	Exo1	8263	-0.165	-0.3271	No
96	G3bp1	8344	-0.170	-0.3303	No
97	Mtf2	8386	-0.174	-0.3302	No
98	Ttk	8413	-0.176	-0.3288	No
99	Polq	8598	-0.190	-0.3401	No
100	Myc	8610	-0.191	-0.3372	No
101	Jpt1	8719	-0.197	-0.3422	No
102	Tle3	8722	-0.197	-0.3385	No
103	Uck2	8816	-0.206	-0.3420	No
104	Smc2	8890	-0.210	-0.3439	Yes
105	Fancc	8893	-0.210	-0.3399	Yes
106	Slc12a2	8907	-0.211	-0.3367	Yes
107	Atrx	8950	-0.214	-0.3359	Yes
108	Nolc1	8962	-0.215	-0.3326	Yes
109	Upf1	8991	-0.218	-0.3306	Yes
110	Pds5b	9006	-0.218	-0.3274	Yes
111	E2f2	9007	-0.218	-0.3230	Yes
112	Tpx2	9052	-0.223	-0.3222	Yes
113	Lmnb1	9055	-0.223	-0.3180	Yes
114	Birc5	9104	-0.228	-0.3174	Yes
115	Gins2	9134	-0.230	-0.3152	Yes
116	Nasp	9166	-0.233	-0.3131	Yes
117	Prpf4b	9218	-0.237	-0.3126	Yes
118	Knl1	9287	-0.242	-0.3134	Yes
119	Hmmr	9376	-0.248	-0.3157	Yes
120	Top2a	9393	-0.250	-0.3121	Yes
121	Cenpf	9404	-0.250	-0.3079	Yes
122	Incenp	9432	-0.253	-0.3051	Yes
123	Cdc6	9579	-0.267	-0.3118	Yes
124	Meis2	9681	-0.276	-0.3146	Yes
125	Ctcf	9716	-0.279	-0.3119	Yes
126	Hus1	9855	-0.291	-0.3174	Yes
127	Ube2c	9935	-0.297	-0.3180	Yes
128	Ccnf	9972	-0.297	-0.3151	Yes
129	Cdk1	10105	-0.310	-0.3198	Yes
130	Slc38a1	10167	-0.316	-0.3185	Yes
131	Atf5	10178	-0.318	-0.3130	Yes
132	Rpa2	10212	-0.319	-0.3094	Yes
133	Cdkn2c	10279	-0.325	-0.3084	Yes
134	Dbf4	10337	-0.330	-0.3065	Yes
135	Mki67	10341	-0.330	-0.3002	Yes
136	Cks2	10362	-0.332	-0.2952	Yes
137	Bard1	10374	-0.332	-0.2896	Yes
138	Hmgb3	10403	-0.337	-0.2852	Yes
139	H2ax	10505	-0.348	-0.2866	Yes
140	Kif15	10571	-0.356	-0.2848	Yes
141	Slc7a5	10584	-0.358	-0.2787	Yes
142	Brca2	10654	-0.365	-0.2771	Yes
143	Nusap1	10685	-0.369	-0.2723	Yes
144	Kif23	10693	-0.369	-0.2655	Yes
145	Pola2	10705	-0.371	-0.2590	Yes
146	Tnpo2	10737	-0.376	-0.2541	Yes
147	Ccna2	10742	-0.377	-0.2470	Yes
148	Ilf3	10777	-0.382	-0.2422	Yes
149	Plk4	10846	-0.392	-0.2400	Yes
150	Cul1	10880	-0.397	-0.2348	Yes
151	Kmt5a	11033	-0.419	-0.2390	Yes
152	Dkc1	11041	-0.420	-0.2312	Yes
153	Ncl	11137	-0.433	-0.2304	Yes
154	Aurka	11182	-0.441	-0.2253	Yes
155	Chek1	11245	-0.450	-0.2215	Yes
156	Tmpo	11321	-0.461	-0.2185	Yes
157	Gspt1	11356	-0.467	-0.2120	Yes
158	Tent4a	11390	-0.473	-0.2053	Yes
159	Ccnb2	11402	-0.475	-0.1968	Yes
160	Dtymk	11446	-0.484	-0.1907	Yes
161	Mapk14	11453	-0.485	-0.1816	Yes
162	Mcm3	11516	-0.495	-0.1769	Yes
163	Tfdp1	11525	-0.497	-0.1677	Yes
164	Stil	11600	-0.512	-0.1636	Yes
165	Prc1	11614	-0.518	-0.1543	Yes
166	Smc4	11628	-0.521	-0.1451	Yes
167	Kpnb1	11670	-0.531	-0.1379	Yes
168	Prim2	11672	-0.531	-0.1275	Yes
169	Hnrnpu	11733	-0.547	-0.1215	Yes
170	Smad3	11806	-0.566	-0.1162	Yes
171	Mad2l1	11903	-0.602	-0.1121	Yes
172	Kif11	11926	-0.611	-0.1018	Yes
173	Foxn3	12014	-0.649	-0.0961	Yes
174	Odf2	12034	-0.659	-0.0845	Yes
175	Ccnd1	12137	-0.711	-0.0788	Yes
176	Srsf10	12139	-0.713	-0.0647	Yes
177	Fbxo5	12218	-0.767	-0.0559	Yes
178	Rbl1	12230	-0.782	-0.0413	Yes
179	Cdk4	12266	-0.814	-0.0280	Yes
180	Map3k20	12287	-0.843	-0.0129	Yes
181	Mcm5	12327	-0.962	0.0030	Yes