| Dataset | HSC.HSC_Pheno.cls#Group2_versus_Group3.HSC_Pheno.cls#Group2_versus_Group3_repos |
| Phenotype | HSC_Pheno.cls#Group2_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.24876165 |
| Normalized Enrichment Score (NES) | -1.0637972 |
| Nominal p-value | 0.306 |
| FDR q-value | 0.62977797 |
| FWER p-Value | 0.996 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Zfp36 | 28 | 1.031 | 0.0289 | No |
| 2 | Fos | 134 | 0.795 | 0.0444 | No |
| 3 | Pgr | 212 | 0.729 | 0.0602 | No |
| 4 | Tpd52l1 | 438 | 0.604 | 0.0601 | No |
| 5 | Myof | 445 | 0.602 | 0.0779 | No |
| 6 | Xbp1 | 461 | 0.596 | 0.0947 | No |
| 7 | Blvrb | 706 | 0.520 | 0.0905 | No |
| 8 | Mocs2 | 987 | 0.462 | 0.0817 | No |
| 9 | Cyp26b1 | 1054 | 0.449 | 0.0899 | No |
| 10 | Klf4 | 1166 | 0.428 | 0.0938 | No |
| 11 | Fkbp4 | 1175 | 0.426 | 0.1060 | No |
| 12 | Large1 | 1180 | 0.425 | 0.1186 | No |
| 13 | Nrip1 | 1233 | 0.420 | 0.1270 | No |
| 14 | Elovl5 | 1292 | 0.409 | 0.1347 | No |
| 15 | Ptpn6 | 1336 | 0.403 | 0.1434 | No |
| 16 | Il6st | 1355 | 0.400 | 0.1540 | No |
| 17 | Dynlt3 | 1653 | 0.365 | 0.1409 | No |
| 18 | Plaat3 | 1747 | 0.358 | 0.1441 | No |
| 19 | Sord | 1794 | 0.353 | 0.1510 | No |
| 20 | Nxt1 | 1886 | 0.342 | 0.1540 | No |
| 21 | Jak1 | 1959 | 0.332 | 0.1582 | No |
| 22 | Amfr | 2223 | 0.306 | 0.1460 | No |
| 23 | Slc24a3 | 2268 | 0.301 | 0.1515 | No |
| 24 | Gfus | 2364 | 0.289 | 0.1525 | No |
| 25 | Lsr | 2597 | 0.262 | 0.1415 | No |
| 26 | Tspan13 | 2607 | 0.261 | 0.1487 | No |
| 27 | Farp1 | 2672 | 0.255 | 0.1512 | No |
| 28 | Tob1 | 2691 | 0.254 | 0.1574 | No |
| 29 | Siah2 | 2756 | 0.248 | 0.1597 | No |
| 30 | Batf | 2852 | 0.239 | 0.1592 | No |
| 31 | Llgl2 | 2898 | 0.234 | 0.1626 | No |
| 32 | Ptger3 | 3008 | 0.224 | 0.1604 | No |
| 33 | Ass1 | 3390 | 0.189 | 0.1351 | No |
| 34 | Tiam1 | 3582 | 0.174 | 0.1248 | No |
| 35 | Abhd2 | 3714 | 0.166 | 0.1191 | No |
| 36 | Itpk1 | 3754 | 0.163 | 0.1209 | No |
| 37 | Unc13b | 3858 | 0.155 | 0.1171 | No |
| 38 | Frk | 4095 | 0.137 | 0.1020 | No |
| 39 | Cox6c | 4227 | 0.127 | 0.0952 | No |
| 40 | Rabep1 | 4554 | 0.106 | 0.0718 | No |
| 41 | Myb | 4618 | 0.102 | 0.0697 | No |
| 42 | Scnn1a | 4938 | 0.077 | 0.0460 | No |
| 43 | Etfb | 5346 | 0.047 | 0.0142 | No |
| 44 | Prkar2b | 5447 | 0.039 | 0.0072 | No |
| 45 | Fdft1 | 5491 | 0.036 | 0.0048 | No |
| 46 | Kcnk5 | 5530 | 0.033 | 0.0027 | No |
| 47 | Flnb | 5680 | 0.023 | -0.0088 | No |
| 48 | Rps6ka2 | 5736 | 0.019 | -0.0127 | No |
| 49 | Dnajc12 | 6031 | 0.000 | -0.0367 | No |
| 50 | S100a9 | 6045 | 0.000 | -0.0377 | No |
| 51 | Cd44 | 6228 | -0.010 | -0.0523 | No |
| 52 | Nab2 | 6311 | -0.015 | -0.0585 | No |
| 53 | Igfbp4 | 6361 | -0.019 | -0.0619 | No |
| 54 | Tjp3 | 6374 | -0.020 | -0.0623 | No |
| 55 | Ptges | 6756 | -0.048 | -0.0919 | No |
| 56 | Fkbp5 | 6824 | -0.052 | -0.0958 | No |
| 57 | Hspa4l | 6951 | -0.062 | -0.1042 | No |
| 58 | Opn3 | 6971 | -0.063 | -0.1039 | No |
| 59 | Btg3 | 7045 | -0.069 | -0.1078 | No |
| 60 | Car2 | 7104 | -0.072 | -0.1103 | No |
| 61 | Ncor2 | 7107 | -0.073 | -0.1083 | No |
| 62 | Cdc20 | 7230 | -0.082 | -0.1157 | No |
| 63 | Aff1 | 7329 | -0.091 | -0.1210 | No |
| 64 | Slc22a5 | 7561 | -0.109 | -0.1365 | No |
| 65 | Jak2 | 7588 | -0.111 | -0.1353 | No |
| 66 | Aldh3a2 | 7618 | -0.113 | -0.1343 | No |
| 67 | Anxa9 | 7748 | -0.125 | -0.1410 | No |
| 68 | Bag1 | 7923 | -0.137 | -0.1511 | No |
| 69 | Cish | 8029 | -0.146 | -0.1552 | No |
| 70 | St14 | 8039 | -0.147 | -0.1515 | No |
| 71 | Chpt1 | 8042 | -0.148 | -0.1472 | No |
| 72 | Rbbp8 | 8296 | -0.167 | -0.1628 | No |
| 73 | Rnaseh2a | 8359 | -0.172 | -0.1627 | No |
| 74 | Xrcc3 | 8563 | -0.187 | -0.1736 | No |
| 75 | Isg20 | 9083 | -0.226 | -0.2091 | No |
| 76 | Gins2 | 9134 | -0.230 | -0.2062 | No |
| 77 | Impa2 | 9149 | -0.231 | -0.2004 | No |
| 78 | Dlg5 | 9228 | -0.237 | -0.1995 | No |
| 79 | Fgfr3 | 9359 | -0.247 | -0.2027 | No |
| 80 | Top2a | 9393 | -0.250 | -0.1978 | No |
| 81 | Ugdh | 9406 | -0.251 | -0.1912 | No |
| 82 | Slc2a8 | 9445 | -0.255 | -0.1866 | No |
| 83 | Cdc6 | 9579 | -0.267 | -0.1894 | No |
| 84 | Sult2b1 | 9795 | -0.286 | -0.1982 | No |
| 85 | Atp2b4 | 10415 | -0.339 | -0.2385 | Yes |
| 86 | Pdcd4 | 10520 | -0.350 | -0.2364 | Yes |
| 87 | Slc7a5 | 10584 | -0.358 | -0.2307 | Yes |
| 88 | Dusp2 | 10607 | -0.360 | -0.2216 | Yes |
| 89 | Snx10 | 10624 | -0.362 | -0.2119 | Yes |
| 90 | Slc26a2 | 10676 | -0.368 | -0.2049 | Yes |
| 91 | Cd9 | 10726 | -0.375 | -0.1976 | Yes |
| 92 | Plk4 | 10846 | -0.392 | -0.1955 | Yes |
| 93 | Plxnb1 | 10972 | -0.411 | -0.1932 | Yes |
| 94 | Rab31 | 10995 | -0.415 | -0.1824 | Yes |
| 95 | Celsr2 | 11217 | -0.446 | -0.1870 | Yes |
| 96 | Slc29a1 | 11349 | -0.466 | -0.1836 | Yes |
| 97 | Dnajc1 | 11388 | -0.472 | -0.1724 | Yes |
| 98 | Add3 | 11550 | -0.504 | -0.1703 | Yes |
| 99 | Slc16a1 | 11584 | -0.510 | -0.1575 | Yes |
| 100 | Stil | 11600 | -0.512 | -0.1432 | Yes |
| 101 | Mettl3 | 11740 | -0.549 | -0.1379 | Yes |
| 102 | Dcxr | 11768 | -0.556 | -0.1233 | Yes |
| 103 | Ppif | 11919 | -0.609 | -0.1171 | Yes |
| 104 | Bcl2 | 11991 | -0.638 | -0.1036 | Yes |
| 105 | Dhcr7 | 12015 | -0.650 | -0.0858 | Yes |
| 106 | Scarb1 | 12136 | -0.710 | -0.0741 | Yes |
| 107 | Ccnd1 | 12137 | -0.711 | -0.0526 | Yes |
| 108 | Arl3 | 12153 | -0.722 | -0.0319 | Yes |
| 109 | Idh2 | 12259 | -0.807 | -0.0161 | Yes |
| 110 | Abca3 | 12260 | -0.808 | 0.0084 | Yes |

