Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group2_versus_Group3.HSC_Pheno.cls#Group2_versus_Group3_repos
Phenotype	HSC_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.22797853
Normalized Enrichment Score (NES)	-1.015513
Nominal p-value	0.45951417
FDR q-value	0.64731854
FWER p-Value	0.997

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ddb1	30	1.022	0.0225	No
2	Bcam	169	0.766	0.0299	No
3	Nudt21	190	0.746	0.0465	No
4	Supt5	241	0.704	0.0596	No
5	Sdcbp	279	0.684	0.0733	No
6	Polr1h	385	0.625	0.0799	No
7	Taf13	508	0.577	0.0841	No
8	Nelfcd	556	0.563	0.0939	No
9	Xpc	638	0.536	0.1004	No
10	Nelfe	695	0.524	0.1086	No
11	Nt5c3	734	0.512	0.1180	No
12	Ddb2	870	0.485	0.1188	No
13	Vps37d	877	0.483	0.1301	No
14	Ak1	977	0.464	0.1333	No
15	Vps37b	1040	0.451	0.1393	No
16	Cox17	1067	0.446	0.1480	No
17	Rad51	1080	0.444	0.1579	No
18	Ncbp2	1089	0.442	0.1680	No
19	Gtf2b	1184	0.424	0.1707	No
20	Ada	1221	0.422	0.1780	No
21	Pnp	1812	0.350	0.1383	No
22	Polr3c	1845	0.346	0.1441	No
23	Rbx1	1849	0.346	0.1523	No
24	Rfc3	2078	0.321	0.1415	No
25	Pom121	2095	0.320	0.1480	No
26	Polh	2236	0.305	0.1440	No
27	Snapc5	2263	0.302	0.1493	No
28	Smad5	2293	0.297	0.1541	No
29	Adrm1	2392	0.285	0.1531	No
30	Adcy6	2477	0.276	0.1530	No
31	Pde4b	2521	0.270	0.1560	No
32	Npr2	2632	0.259	0.1534	No
33	Rala	2706	0.252	0.1536	No
34	Rad52	2801	0.245	0.1518	No
35	Gtf2a2	2874	0.237	0.1517	No
36	Sec61a1	3020	0.222	0.1453	No
37	Rae1	3174	0.208	0.1379	No
38	Cmpk2	3184	0.207	0.1422	No
39	Rpa3	3199	0.206	0.1461	No
40	Ak3	3249	0.201	0.1470	No
41	Mrpl40	3348	0.192	0.1436	No
42	Cant1	3381	0.190	0.1457	No
43	Pcna	3408	0.188	0.1481	No
44	Usp11	4040	0.142	0.1000	No
45	Mpg	4237	0.126	0.0870	No
46	Supt4a	4641	0.100	0.0565	No
47	Ago4	4703	0.096	0.0538	No
48	Rrm2b	4787	0.088	0.0492	No
49	Nudt9	4846	0.084	0.0465	No
50	Polr2c	4869	0.081	0.0467	No
51	Vps28	4884	0.081	0.0475	No
52	Arl6ip1	4903	0.079	0.0480	No
53	Polr2j	5115	0.063	0.0322	No
54	Ercc5	5176	0.060	0.0288	No
55	Rfc5	5212	0.057	0.0273	No
56	Zfp707	5378	0.044	0.0149	No
57	Dguok	5451	0.038	0.0099	No
58	Clp1	5523	0.034	0.0050	No
59	Dgcr8	5697	0.022	-0.0087	No
60	Polr2g	5708	0.021	-0.0090	No
61	Cstf3	5830	0.013	-0.0185	No
62	Taf1c	5918	0.008	-0.0255	No
63	Guk1	6023	0.000	-0.0340	No
64	Lig1	6134	-0.003	-0.0429	No
65	Polr1c	6176	-0.007	-0.0461	No
66	Ercc3	6208	-0.009	-0.0484	No
67	Polb	6210	-0.009	-0.0483	No
68	Polr1d	6366	-0.019	-0.0605	No
69	Nt5c	6409	-0.022	-0.0634	No
70	Edf1	6808	-0.051	-0.0947	No
71	Cetn2	6825	-0.052	-0.0947	No
72	Stx3	6897	-0.057	-0.0991	No
73	Poll	6970	-0.063	-0.1035	No
74	Polr2h	7078	-0.070	-0.1105	No
75	Nelfb	7128	-0.074	-0.1127	No
76	Taf6	7144	-0.075	-0.1121	No
77	Nme1	7335	-0.092	-0.1254	No
78	Tsg101	7382	-0.096	-0.1269	No
79	Gmpr2	7732	-0.123	-0.1524	No
80	Ercc8	7845	-0.131	-0.1584	No
81	Ssrp1	7906	-0.135	-0.1600	No
82	Upf3b	7932	-0.137	-0.1587	No
83	Polr3gl	8047	-0.148	-0.1644	No
84	Polr2e	8129	-0.154	-0.1672	No
85	Taf10	8188	-0.158	-0.1681	No
86	Nme4	8226	-0.161	-0.1672	No
87	Ercc1	8248	-0.164	-0.1649	No
88	Pold3	8266	-0.165	-0.1623	No
89	Ercc2	8458	-0.179	-0.1735	No
90	Impdh2	8544	-0.186	-0.1760	No
91	Gtf2h5	8548	-0.186	-0.1717	No
92	Gtf2h3	8568	-0.187	-0.1686	No
93	Bcap31	8608	-0.191	-0.1672	No
94	Polr2a	8625	-0.192	-0.1638	No
95	Rfc4	8971	-0.216	-0.1868	No
96	Prim1	9042	-0.222	-0.1871	No
97	Aprt	9082	-0.226	-0.1847	No
98	Tyms	9257	-0.240	-0.1931	No
99	Snapc4	9302	-0.244	-0.1908	No
100	Ercc4	9371	-0.247	-0.1903	No
101	Ell	9384	-0.249	-0.1852	No
102	Srsf6	9543	-0.263	-0.1917	No
103	Eloa	9710	-0.278	-0.1985	No
104	Rfc2	9893	-0.294	-0.2062	No
105	Alyref	10160	-0.315	-0.2203	Yes
106	Gpx4	10210	-0.319	-0.2165	Yes
107	Rpa2	10212	-0.319	-0.2088	Yes
108	Pole4	10246	-0.322	-0.2036	Yes
109	Aaas	10413	-0.339	-0.2089	Yes
110	Dut	10429	-0.340	-0.2019	Yes
111	Dctn4	10538	-0.352	-0.2021	Yes
112	Gtf2f1	10581	-0.357	-0.1968	Yes
113	Umps	10605	-0.360	-0.1899	Yes
114	Pola2	10705	-0.371	-0.1889	Yes
115	Surf1	10711	-0.372	-0.1803	Yes
116	Tarbp2	10718	-0.373	-0.1717	Yes
117	Hcls1	10810	-0.386	-0.1697	Yes
118	Rev3l	10860	-0.394	-0.1640	Yes
119	Pold4	10944	-0.407	-0.1609	Yes
120	Gtf3c5	10990	-0.415	-0.1545	Yes
121	Tk2	11214	-0.446	-0.1618	Yes
122	Sf3a3	11316	-0.460	-0.1588	Yes
123	Brf2	11347	-0.465	-0.1499	Yes
124	Pola1	11387	-0.472	-0.1416	Yes
125	Itpa	11399	-0.474	-0.1309	Yes
126	Gtf2h1	11462	-0.487	-0.1241	Yes
127	Zwint	11467	-0.487	-0.1126	Yes
128	Fen1	11471	-0.488	-0.1009	Yes
129	Taf9	11501	-0.494	-0.0912	Yes
130	Rnmt	11566	-0.507	-0.0841	Yes
131	Polr2f	11669	-0.530	-0.0795	Yes
132	Taf12	11742	-0.550	-0.0719	Yes
133	Nfx1	11879	-0.595	-0.0685	Yes
134	Mpc2	11925	-0.610	-0.0573	Yes
135	Pold1	12059	-0.671	-0.0518	Yes
136	Trp53	12064	-0.673	-0.0357	Yes
137	Eif1b	12215	-0.765	-0.0293	Yes
138	Gsdme	12242	-0.789	-0.0122	Yes
139	Dad1	12310	-0.900	0.0043	Yes