Details for gene set HALLMARK_INTERFERON_GAMMA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group1_versus_Group4.HSC_Pheno.cls#Group1_versus_Group4_repos
Phenotype	HSC_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)	-0.31316215
Normalized Enrichment Score (NES)	-1.3344857
Nominal p-value	0.052525252
FDR q-value	0.693645
FWER p-Value	0.704

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Mthfd2	354	0.733	-0.0118	No
2	Ddx60	444	0.683	-0.0032	No
3	Jak2	573	0.637	0.0012	No
4	Ube2l6	655	0.610	0.0089	No
5	Fgl2	708	0.597	0.0186	No
6	Trim25	1027	0.529	0.0049	No
7	P2ry14	1036	0.526	0.0165	No
8	Pnpt1	1087	0.516	0.0245	No
9	Psma2	1168	0.501	0.0297	No
10	Psma3	1188	0.497	0.0398	No
11	Arl4a	1275	0.481	0.0440	No
12	Il4ra	1317	0.475	0.0517	No
13	Pde4b	1341	0.469	0.0608	No
14	Usp18	1598	0.431	0.0499	No
15	Samd9l	1634	0.428	0.0570	No
16	Slc25a28	1698	0.419	0.0617	No
17	Socs3	1861	0.401	0.0578	No
18	Sppl2a	1910	0.397	0.0632	No
19	Peli1	1961	0.391	0.0682	No
20	Rnf213	2071	0.378	0.0681	No
21	Batf2	2118	0.374	0.0731	No
22	Ptpn2	2247	0.357	0.0710	No
23	Znfx1	2338	0.348	0.0717	No
24	Zbp1	2442	0.336	0.0712	No
25	Nfkb1	2500	0.330	0.0742	No
26	Isoc1	2625	0.317	0.0715	No
27	Xaf1	2693	0.310	0.0732	No
28	Il18bp	2838	0.294	0.0683	No
29	Stat2	3030	0.276	0.0591	No
30	Mvp	3076	0.271	0.0618	No
31	Ncoa3	3821	0.210	0.0058	No
32	Adar	3860	0.208	0.0075	No
33	Herc6	3888	0.206	0.0101	No
34	Ifi35	3893	0.205	0.0146	No
35	Cd86	3952	0.202	0.0146	No
36	Casp4	4249	0.176	-0.0055	No
37	Mx2	4621	0.148	-0.0325	No
38	Cd274	4685	0.143	-0.0343	No
39	Lgals3bp	4701	0.142	-0.0322	No
40	Trim14	4707	0.141	-0.0293	No
41	Ifih1	4790	0.136	-0.0328	No
42	Isg20	4803	0.134	-0.0307	No
43	Hif1a	4872	0.128	-0.0333	No
44	Upp1	4930	0.124	-0.0350	No
45	Txnip	4947	0.123	-0.0334	No
46	Arid5b	5001	0.119	-0.0350	No
47	Parp14	5041	0.116	-0.0355	No
48	Btg1	5303	0.097	-0.0546	No
49	Cmtr1	5323	0.096	-0.0539	No
50	Pnp	5394	0.091	-0.0575	No
51	Eif4e3	5968	0.049	-0.1033	No
52	Ogfr	6091	0.040	-0.1124	No
53	Irf1	6146	0.036	-0.1159	No
54	Oas2	6191	0.033	-0.1188	No
55	Rigi	6294	0.028	-0.1265	No
56	Tor1b	6310	0.026	-0.1271	No
57	Trim26	6377	0.021	-0.1320	No
58	Oasl1	6436	0.018	-0.1363	No
59	Ifitm2	6482	0.015	-0.1397	No
60	Il10ra	6532	0.011	-0.1434	No
61	Psmb2	6552	0.009	-0.1447	No
62	Ifi44	6656	0.003	-0.1531	No
63	Rtp4	6869	-0.007	-0.1703	No
64	Ptpn6	6882	-0.008	-0.1711	No
65	Nmi	7044	-0.019	-0.1838	No
66	Cmpk2	7175	-0.028	-0.1938	No
67	Pfkp	7219	-0.032	-0.1966	No
68	Icam1	7262	-0.035	-0.1992	No
69	Casp8	7291	-0.037	-0.2006	No
70	Bpgm	7297	-0.037	-0.2002	No
71	Nampt	7416	-0.046	-0.2088	No
72	Gch1	7420	-0.046	-0.2080	No
73	Lap3	7465	-0.049	-0.2104	No
74	Itgb7	7542	-0.055	-0.2154	No
75	Irf9	7691	-0.066	-0.2260	No
76	Auts2	7758	-0.071	-0.2297	No
77	Irf5	7829	-0.076	-0.2337	No
78	Cd38	7868	-0.079	-0.2349	No
79	Myd88	7912	-0.081	-0.2366	No
80	Nfkbia	7948	-0.084	-0.2375	No
81	Irf8	7975	-0.086	-0.2376	No
82	Bst2	7985	-0.088	-0.2363	No
83	Helz2	8025	-0.090	-0.2374	No
84	Eif2ak2	8086	-0.095	-0.2400	No
85	Ifnar2	8184	-0.102	-0.2456	No
86	Trafd1	8279	-0.109	-0.2507	No
87	Rapgef6	8298	-0.111	-0.2496	No
88	Ptpn1	8318	-0.112	-0.2486	No
89	Vamp5	8386	-0.117	-0.2513	No
90	Ifitm3	8568	-0.131	-0.2631	No
91	Wars1	8687	-0.138	-0.2695	No
92	Plscr1	8721	-0.141	-0.2689	No
93	Gbp3	8726	-0.141	-0.2659	No
94	Il7	8804	-0.146	-0.2688	No
95	Stat4	8812	-0.147	-0.2659	No
96	H2-Aa	8822	-0.148	-0.2632	No
97	Sp110	8842	-0.149	-0.2613	No
98	St8sia4	8982	-0.161	-0.2689	No
99	Rnf31	9006	-0.163	-0.2670	No
100	Pim1	9134	-0.173	-0.2733	No
101	Irf7	9145	-0.174	-0.2701	No
102	Il15	9157	-0.176	-0.2669	No
103	Epsti1	9189	-0.178	-0.2653	No
104	Oas3	9271	-0.186	-0.2676	No
105	Stat3	9275	-0.186	-0.2635	No
106	Tnfaip3	9424	-0.197	-0.2710	No
107	Psme2	9477	-0.201	-0.2705	No
108	Psmb8	9623	-0.212	-0.2775	No
109	Tnfaip2	9652	-0.214	-0.2748	No
110	Tdrd7	9710	-0.218	-0.2743	No
111	Psmb9	9735	-0.221	-0.2711	No
112	Lcp2	9766	-0.223	-0.2684	No
113	Ciita	9970	-0.244	-0.2793	No
114	Selp	10144	-0.260	-0.2874	No
115	Ripk2	10202	-0.265	-0.2859	No
116	Socs1	10274	-0.271	-0.2853	No
117	Tnfsf10	10341	-0.277	-0.2842	No
118	Vamp8	10583	-0.301	-0.2969	No
119	Casp1	10726	-0.317	-0.3012	No
120	Ripk1	10827	-0.328	-0.3017	No
121	Nup93	10862	-0.332	-0.2967	No
122	Dhx58	11064	-0.358	-0.3048	Yes
123	Sod2	11116	-0.363	-0.3005	Yes
124	Tapbp	11185	-0.373	-0.2973	Yes
125	Fas	11193	-0.374	-0.2892	Yes
126	Ifi27	11219	-0.377	-0.2824	Yes
127	Cd74	11235	-0.380	-0.2748	Yes
128	Il15ra	11253	-0.382	-0.2672	Yes
129	Irf2	11304	-0.389	-0.2622	Yes
130	Lats2	11362	-0.399	-0.2575	Yes
131	Parp12	11383	-0.401	-0.2498	Yes
132	Rbck1	11421	-0.409	-0.2432	Yes
133	Bank1	11524	-0.427	-0.2416	Yes
134	Nlrc5	11625	-0.448	-0.2393	Yes
135	Trim21	11680	-0.460	-0.2330	Yes
136	Ifit2	11696	-0.463	-0.2234	Yes
137	Casp3	11793	-0.483	-0.2200	Yes
138	Tap1	11800	-0.485	-0.2091	Yes
139	Lysmd2	11802	-0.487	-0.1978	Yes
140	Psme1	11832	-0.492	-0.1887	Yes
141	Casp7	11848	-0.495	-0.1783	Yes
142	H2-DMa	11942	-0.524	-0.1737	Yes
143	Psmb10	11983	-0.537	-0.1644	Yes
144	Pla2g4a	12015	-0.549	-0.1541	Yes
145	Rsad2	12081	-0.580	-0.1459	Yes
146	Sspn	12100	-0.585	-0.1336	Yes
147	Ly6e	12119	-0.597	-0.1212	Yes
148	St3gal5	12150	-0.620	-0.1091	Yes
149	Samhd1	12278	-0.746	-0.1021	Yes
150	Stat1	12292	-0.770	-0.0851	Yes
151	Sri	12315	-0.818	-0.0678	Yes
152	B2m	12322	-0.848	-0.0485	Yes
153	Pml	12344	-0.937	-0.0283	Yes
154	Nod1	12360	-1.271	0.0002	Yes