| Dataset | HSC.HSC_Pheno.cls#Group1_versus_Group4.HSC_Pheno.cls#Group1_versus_Group4_repos |
| Phenotype | HSC_Pheno.cls#Group1_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.23307417 |
| Normalized Enrichment Score (NES) | -1.0042696 |
| Nominal p-value | 0.46478873 |
| FDR q-value | 0.9624516 |
| FWER p-Value | 0.999 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Nxt1 | 271 | 0.777 | 0.0032 | No |
| 2 | Prkar2b | 425 | 0.690 | 0.0132 | No |
| 3 | Btg3 | 537 | 0.650 | 0.0254 | No |
| 4 | Jak2 | 573 | 0.637 | 0.0433 | No |
| 5 | Rabep1 | 583 | 0.632 | 0.0631 | No |
| 6 | Cdc20 | 637 | 0.616 | 0.0789 | No |
| 7 | Rnaseh2a | 647 | 0.613 | 0.0982 | No |
| 8 | St14 | 767 | 0.577 | 0.1073 | No |
| 9 | Stil | 815 | 0.567 | 0.1220 | No |
| 10 | Batf | 847 | 0.563 | 0.1378 | No |
| 11 | Sult2b1 | 1022 | 0.530 | 0.1409 | No |
| 12 | Gfus | 1051 | 0.523 | 0.1557 | No |
| 13 | Dusp2 | 1084 | 0.517 | 0.1699 | No |
| 14 | Cd9 | 1249 | 0.485 | 0.1723 | No |
| 15 | Top2a | 1544 | 0.438 | 0.1626 | No |
| 16 | Celsr2 | 1754 | 0.413 | 0.1590 | No |
| 17 | Dnajc1 | 1995 | 0.385 | 0.1520 | No |
| 18 | Scnn1a | 2190 | 0.364 | 0.1480 | No |
| 19 | Abhd2 | 2307 | 0.350 | 0.1500 | No |
| 20 | Tob1 | 2420 | 0.338 | 0.1519 | No |
| 21 | Itpk1 | 2464 | 0.334 | 0.1593 | No |
| 22 | Tjp3 | 2505 | 0.329 | 0.1668 | No |
| 23 | Ccnd1 | 2615 | 0.318 | 0.1683 | No |
| 24 | Zfp36 | 2690 | 0.311 | 0.1724 | No |
| 25 | Atp2b4 | 2797 | 0.298 | 0.1734 | No |
| 26 | Nab2 | 3032 | 0.276 | 0.1633 | No |
| 27 | Opn3 | 3172 | 0.261 | 0.1605 | No |
| 28 | Fkbp4 | 3545 | 0.231 | 0.1377 | No |
| 29 | Pdcd4 | 3587 | 0.226 | 0.1417 | No |
| 30 | Pgr | 3862 | 0.208 | 0.1261 | No |
| 31 | Slc2a8 | 4030 | 0.196 | 0.1189 | No |
| 32 | Lsr | 4043 | 0.194 | 0.1242 | No |
| 33 | Ppif | 4099 | 0.189 | 0.1259 | No |
| 34 | Tpd52l1 | 4333 | 0.169 | 0.1124 | No |
| 35 | Ugdh | 4425 | 0.162 | 0.1103 | No |
| 36 | Flnb | 4595 | 0.150 | 0.1014 | No |
| 37 | Rbbp8 | 4684 | 0.143 | 0.0989 | No |
| 38 | Dcxr | 4718 | 0.140 | 0.1008 | No |
| 39 | Isg20 | 4803 | 0.134 | 0.0983 | No |
| 40 | Etfb | 4848 | 0.130 | 0.0989 | No |
| 41 | Slc22a5 | 4858 | 0.129 | 0.1024 | No |
| 42 | Anxa9 | 5128 | 0.110 | 0.0840 | No |
| 43 | Llgl2 | 5156 | 0.107 | 0.0853 | No |
| 44 | Fdft1 | 5176 | 0.106 | 0.0872 | No |
| 45 | Xrcc3 | 5210 | 0.103 | 0.0879 | No |
| 46 | Plaat3 | 5337 | 0.095 | 0.0807 | No |
| 47 | Cox6c | 5516 | 0.081 | 0.0688 | No |
| 48 | Cyp26b1 | 5647 | 0.072 | 0.0606 | No |
| 49 | Il6st | 5690 | 0.069 | 0.0594 | No |
| 50 | Arl3 | 5751 | 0.066 | 0.0566 | No |
| 51 | Dynlt3 | 5777 | 0.063 | 0.0567 | No |
| 52 | Jak1 | 6106 | 0.039 | 0.0312 | No |
| 53 | Abca3 | 6204 | 0.033 | 0.0243 | No |
| 54 | Slc7a5 | 6254 | 0.030 | 0.0213 | No |
| 55 | Plk4 | 6278 | 0.029 | 0.0204 | No |
| 56 | Frk | 6355 | 0.023 | 0.0149 | No |
| 57 | Sord | 6413 | 0.020 | 0.0109 | No |
| 58 | Farp1 | 6543 | 0.010 | 0.0007 | No |
| 59 | Tspan13 | 6691 | 0.001 | -0.0113 | No |
| 60 | Klf4 | 6716 | 0.000 | -0.0132 | No |
| 61 | S100a9 | 6737 | 0.000 | -0.0149 | No |
| 62 | Ptpn6 | 6882 | -0.008 | -0.0263 | No |
| 63 | Xbp1 | 6917 | -0.010 | -0.0288 | No |
| 64 | Mocs2 | 6953 | -0.013 | -0.0312 | No |
| 65 | Bcl2 | 7184 | -0.029 | -0.0491 | No |
| 66 | Igfbp4 | 7294 | -0.037 | -0.0568 | No |
| 67 | Slc29a1 | 7464 | -0.049 | -0.0690 | No |
| 68 | Rps6ka2 | 7722 | -0.068 | -0.0877 | No |
| 69 | Tiam1 | 7837 | -0.077 | -0.0945 | No |
| 70 | Fos | 7915 | -0.082 | -0.0981 | No |
| 71 | Aldh3a2 | 8288 | -0.110 | -0.1249 | No |
| 72 | Siah2 | 8342 | -0.114 | -0.1255 | No |
| 73 | Unc13b | 8411 | -0.119 | -0.1272 | No |
| 74 | Nrip1 | 8475 | -0.123 | -0.1283 | No |
| 75 | Fgfr3 | 8492 | -0.125 | -0.1255 | No |
| 76 | Slc26a2 | 8559 | -0.131 | -0.1267 | No |
| 77 | Plxnb1 | 8625 | -0.134 | -0.1276 | No |
| 78 | Elovl5 | 8945 | -0.158 | -0.1485 | No |
| 79 | Slc16a1 | 9175 | -0.177 | -0.1614 | No |
| 80 | Hspa4l | 9648 | -0.213 | -0.1930 | No |
| 81 | Dhcr7 | 9693 | -0.217 | -0.1895 | No |
| 82 | Ptges | 9951 | -0.242 | -0.2026 | No |
| 83 | Dnajc12 | 10267 | -0.271 | -0.2194 | No |
| 84 | Ncor2 | 10311 | -0.275 | -0.2140 | No |
| 85 | Ptger3 | 10419 | -0.285 | -0.2134 | No |
| 86 | Mettl3 | 10429 | -0.286 | -0.2048 | No |
| 87 | Idh2 | 10776 | -0.323 | -0.2225 | Yes |
| 88 | Dlg5 | 10797 | -0.326 | -0.2135 | Yes |
| 89 | Amfr | 10933 | -0.340 | -0.2135 | Yes |
| 90 | Slc24a3 | 10964 | -0.345 | -0.2047 | Yes |
| 91 | Blvrb | 10979 | -0.347 | -0.1945 | Yes |
| 92 | Rab31 | 11067 | -0.358 | -0.1899 | Yes |
| 93 | Gins2 | 11090 | -0.360 | -0.1799 | Yes |
| 94 | Add3 | 11153 | -0.367 | -0.1730 | Yes |
| 95 | Impa2 | 11322 | -0.392 | -0.1739 | Yes |
| 96 | Cdc6 | 11407 | -0.407 | -0.1675 | Yes |
| 97 | Myb | 11446 | -0.414 | -0.1571 | Yes |
| 98 | Ass1 | 11603 | -0.444 | -0.1554 | Yes |
| 99 | Kcnk5 | 11682 | -0.460 | -0.1467 | Yes |
| 100 | Bag1 | 11691 | -0.462 | -0.1323 | Yes |
| 101 | Scarb1 | 11733 | -0.471 | -0.1203 | Yes |
| 102 | Chpt1 | 11888 | -0.505 | -0.1164 | Yes |
| 103 | Fkbp5 | 11933 | -0.520 | -0.1031 | Yes |
| 104 | Cd44 | 11972 | -0.534 | -0.0887 | Yes |
| 105 | Large1 | 12011 | -0.548 | -0.0740 | Yes |
| 106 | Cish | 12012 | -0.548 | -0.0561 | Yes |
| 107 | Myof | 12046 | -0.566 | -0.0403 | Yes |
| 108 | Car2 | 12167 | -0.632 | -0.0295 | Yes |
| 109 | Aff1 | 12188 | -0.647 | -0.0100 | Yes |
| 110 | Snx10 | 12273 | -0.742 | 0.0073 | Yes |

