Details for gene set HALLMARK_TGF_BETA

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group1_versus_Group3.HSC_Pheno.cls#Group1_versus_Group3_repos
Phenotype	HSC_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)	-0.3396618
Normalized Enrichment Score (NES)	-1.2913568
Nominal p-value	0.10788382
FDR q-value	1.0
FWER p-Value	0.838

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Skil	33	1.193	0.0650	No
2	Junb	100	0.977	0.1150	No
3	Ppp1r15a	282	0.760	0.1434	No
4	Thbs1	577	0.605	0.1538	No
5	Smurf1	887	0.519	0.1581	No
6	Wwtr1	1171	0.456	0.1610	No
7	Ube2d3	1385	0.419	0.1674	No
8	Hipk2	1562	0.397	0.1757	No
9	Klf10	1791	0.373	0.1783	No
10	Sptbn1	1891	0.358	0.1906	No
11	Arid4b	2388	0.295	0.1670	No
12	Acvr1	2488	0.282	0.1749	No
13	Tgif1	2566	0.275	0.1843	No
14	Smad6	3336	0.209	0.1337	No
15	Pmepa1	3345	0.208	0.1448	No
16	Bmpr1a	3757	0.176	0.1214	No
17	Cdkn1c	5157	0.065	0.0115	No
18	Fnta	5161	0.064	0.0149	No
19	Eng	5207	0.061	0.0147	No
20	Smad1	6936	-0.055	-0.1224	No
21	Tjp1	7453	-0.086	-0.1594	No
22	Smad7	7726	-0.106	-0.1755	No
23	Tgfb1	7830	-0.113	-0.1774	No
24	Smurf2	8055	-0.127	-0.1884	No
25	Map3k7	8620	-0.166	-0.2248	No
26	Ncor2	8770	-0.178	-0.2268	No
27	Bmpr2	8834	-0.183	-0.2215	No
28	Xiap	8863	-0.185	-0.2133	No
29	Ctnnb1	9739	-0.255	-0.2699	No
30	Ski	10159	-0.292	-0.2873	No
31	Tgfbr1	10649	-0.341	-0.3077	No
32	Bcar3	11044	-0.393	-0.3174	Yes
33	Ppm1a	11244	-0.425	-0.3095	Yes
34	Ifngr2	11246	-0.425	-0.2855	Yes
35	Ppp1ca	11507	-0.469	-0.2800	Yes
36	Rab31	11699	-0.507	-0.2667	Yes
37	Trim33	11748	-0.518	-0.2413	Yes
38	Fkbp1a	11749	-0.518	-0.2119	Yes
39	Apc	11775	-0.525	-0.1842	Yes
40	Slc20a1	11856	-0.547	-0.1597	Yes
41	Cdk9	12058	-0.619	-0.1409	Yes
42	Rhoa	12123	-0.658	-0.1088	Yes
43	Hdac1	12190	-0.706	-0.0741	Yes
44	Furin	12227	-0.740	-0.0351	Yes
45	Smad3	12287	-0.813	0.0062	Yes