Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group1_versus_Group3.HSC_Pheno.cls#Group1_versus_Group3_repos
Phenotype	HSC_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.18599184
Normalized Enrichment Score (NES)	0.85545087
Nominal p-value	0.7987288
FDR q-value	0.890125
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Mpzl1	46	1.143	0.0342	Yes
2	Fbn1	208	0.825	0.0484	Yes
3	Cadm2	259	0.774	0.0700	Yes
4	Akt3	273	0.767	0.0944	Yes
5	Shroom2	397	0.692	0.1073	Yes
6	Nf2	401	0.691	0.1300	Yes
7	Itga3	623	0.585	0.1314	Yes
8	Dlg1	824	0.537	0.1328	Yes
9	Tsc1	847	0.529	0.1486	Yes
10	Itgb1	1015	0.490	0.1512	Yes
11	Pals1	1028	0.484	0.1663	Yes
12	Nectin1	1090	0.473	0.1770	Yes
13	Ikbkg	1167	0.457	0.1860	Yes
14	Itga10	1353	0.423	0.1849	No
15	Col16a1	1878	0.360	0.1541	No
16	Fscn1	1970	0.345	0.1581	No
17	Akt2	2338	0.301	0.1381	No
18	Amigo2	2428	0.289	0.1404	No
19	Skap2	2552	0.276	0.1395	No
20	Cd274	2579	0.274	0.1465	No
21	Cx3cl1	3031	0.231	0.1173	No
22	Vasp	3120	0.225	0.1176	No
23	Tgfbi	3176	0.221	0.1204	No
24	Adam9	3204	0.219	0.1255	No
25	Tial1	3241	0.215	0.1297	No
26	Hadh	3249	0.215	0.1363	No
27	Kcnh2	3324	0.209	0.1371	No
28	Sirpa	3429	0.202	0.1354	No
29	Shc1	3647	0.186	0.1238	No
30	Myh9	3728	0.178	0.1232	No
31	Pkd1	3828	0.169	0.1207	No
32	Sorbs3	4100	0.146	0.1034	No
33	Traf1	4159	0.142	0.1034	No
34	Icam1	4289	0.132	0.0972	No
35	Vcan	4351	0.127	0.0964	No
36	Jup	4383	0.125	0.0981	No
37	Inppl1	4465	0.118	0.0954	No
38	Insig1	4485	0.117	0.0977	No
39	Vav2	4536	0.112	0.0973	No
40	Nrtn	4620	0.105	0.0941	No
41	Cnn2	4681	0.100	0.0925	No
42	Evl	4779	0.093	0.0876	No
43	Lima1	4867	0.086	0.0834	No
44	Ctnnd1	4918	0.083	0.0821	No
45	Bmp1	5133	0.066	0.0668	No
46	Gnai2	5202	0.061	0.0632	No
47	Ldlrap1	5312	0.054	0.0561	No
48	Nf1	5313	0.054	0.0579	No
49	Nrap	5347	0.052	0.0569	No
50	Cercam	5351	0.051	0.0584	No
51	Dhx16	5443	0.045	0.0525	No
52	Cntn1	5517	0.040	0.0478	No
53	Ptk2	5799	0.021	0.0256	No
54	Pecam1	5901	0.012	0.0177	No
55	Vcl	5947	0.010	0.0144	No
56	Rras	6229	-0.006	-0.0084	No
57	Zyx	6304	-0.011	-0.0141	No
58	Vwf	6379	-0.016	-0.0196	No
59	Nectin4	6386	-0.017	-0.0195	No
60	Mapk14	6484	-0.025	-0.0266	No
61	Tmem8b	6490	-0.025	-0.0262	No
62	Plcg1	6547	-0.029	-0.0298	No
63	Nrxn2	6700	-0.039	-0.0410	No
64	Pten	6750	-0.042	-0.0436	No
65	Rac2	6892	-0.052	-0.0534	No
66	Actn1	6926	-0.054	-0.0543	No
67	Jam3	7138	-0.068	-0.0693	No
68	Tro	7253	-0.075	-0.0761	No
69	Rhof	7322	-0.078	-0.0790	No
70	Amigo1	7414	-0.084	-0.0837	No
71	Gtf2f1	7420	-0.084	-0.0813	No
72	Tjp1	7453	-0.086	-0.0811	No
73	Actn4	7609	-0.099	-0.0905	No
74	Lamb3	7638	-0.101	-0.0894	No
75	Pbx2	7731	-0.106	-0.0934	No
76	Map4k2	7774	-0.109	-0.0932	No
77	Actg1	7786	-0.111	-0.0904	No
78	Baiap2	7911	-0.118	-0.0966	No
79	B4galt1	7949	-0.120	-0.0957	No
80	Cd276	7968	-0.122	-0.0931	No
81	Adam15	8107	-0.131	-0.1000	No
82	Tspan4	8248	-0.141	-0.1068	No
83	Rsu1	8378	-0.150	-0.1123	No
84	Taok2	8433	-0.153	-0.1117	No
85	Ctnna1	8514	-0.158	-0.1130	No
86	Tubg1	8525	-0.159	-0.1085	No
87	Msn	8549	-0.161	-0.1050	No
88	Nectin3	8640	-0.167	-0.1068	No
89	Cd86	8651	-0.168	-0.1021	No
90	Gnai1	8754	-0.177	-0.1045	No
91	Ptprc	8840	-0.183	-0.1054	No
92	Myh10	9275	-0.216	-0.1337	No
93	Icam2	9283	-0.216	-0.1271	No
94	Itga9	9301	-0.217	-0.1213	No
95	Speg	9351	-0.222	-0.1179	No
96	Myl12b	9564	-0.240	-0.1273	No
97	Sympk	9600	-0.243	-0.1221	No
98	Rasa1	9602	-0.243	-0.1141	No
99	Itga2	9708	-0.253	-0.1143	No
100	Sdc3	9741	-0.255	-0.1084	No
101	Stx4a	9744	-0.256	-0.1001	No
102	Exoc4	9897	-0.268	-0.1036	No
103	Slit2	9898	-0.268	-0.0947	No
104	Cdk8	10000	-0.277	-0.0938	No
105	Epb41l2	10018	-0.279	-0.0859	No
106	Pfn1	10133	-0.288	-0.0856	No
107	Src	10333	-0.307	-0.0917	No
108	Actb	10363	-0.310	-0.0838	No
109	Sgce	10366	-0.310	-0.0737	No
110	Layn	10488	-0.324	-0.0728	No
111	Arpc2	10541	-0.329	-0.0661	No
112	Cd34	10650	-0.341	-0.0636	No
113	Crat	10742	-0.351	-0.0594	No
114	Nlgn2	10807	-0.359	-0.0527	No
115	Pik3cb	10885	-0.368	-0.0468	No
116	Ywhah	11197	-0.416	-0.0584	No
117	Map3k20	11552	-0.479	-0.0714	No
118	Lama3	11650	-0.497	-0.0629	No
119	Mmp2	11760	-0.521	-0.0545	No
120	Wasl	11767	-0.524	-0.0376	No
121	Pard6g	11898	-0.557	-0.0297	No
122	Cap1	12024	-0.604	-0.0199	No
123	Syk	12087	-0.633	-0.0040	No
124	Arhgef6	12275	-0.797	0.0072	No