Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group1_versus_Group2.HSC_Pheno.cls#Group1_versus_Group2_repos
Phenotype	HSC_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	0.19261682
Normalized Enrichment Score (NES)	0.8724048
Nominal p-value	0.76893204
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Wsb1	14	1.241	0.0317	Yes
2	Eno3	22	1.180	0.0624	Yes
3	Sdc4	39	1.084	0.0897	Yes
4	Sult2b1	59	1.032	0.1155	Yes
5	Tpst2	81	0.964	0.1393	Yes
6	Inha	680	0.584	0.1059	Yes
7	Ndst2	806	0.550	0.1102	Yes
8	Eno2	829	0.542	0.1228	Yes
9	Gys1	927	0.519	0.1286	Yes
10	Kdm3a	1060	0.489	0.1307	Yes
11	Hoxb9	1199	0.466	0.1317	Yes
12	Noct	1205	0.465	0.1436	Yes
13	Slc6a6	1270	0.456	0.1505	Yes
14	Maff	1444	0.429	0.1477	Yes
15	Ids	1601	0.409	0.1458	Yes
16	Myh9	1631	0.405	0.1541	Yes
17	Slc2a1	1672	0.399	0.1614	Yes
18	Pdgfb	1782	0.382	0.1626	Yes
19	Ampd3	1837	0.375	0.1682	Yes
20	Tpd52	1883	0.370	0.1743	Yes
21	Tgfb3	1895	0.368	0.1831	Yes
22	Vegfa	2165	0.335	0.1700	Yes
23	Pfkp	2167	0.335	0.1788	Yes
24	Fam162a	2181	0.333	0.1865	Yes
25	Phkg1	2236	0.326	0.1908	Yes
26	Jmjd6	2395	0.309	0.1860	Yes
27	Ddit3	2568	0.289	0.1796	Yes
28	Selenbp1	2658	0.279	0.1797	Yes
29	Isg20	2671	0.279	0.1861	Yes
30	Hk2	2701	0.276	0.1910	Yes
31	Pam	2873	0.259	0.1839	Yes
32	Ppp1r15a	2886	0.257	0.1898	Yes
33	Ankzf1	2934	0.253	0.1926	Yes
34	Hs3st1	3065	0.240	0.1883	No
35	Lxn	3194	0.229	0.1839	No
36	Csrp2	3283	0.223	0.1826	No
37	Mt1	3351	0.217	0.1829	No
38	Ero1a	3414	0.212	0.1835	No
39	Bnip3l	3489	0.205	0.1828	No
40	Gaa	3575	0.198	0.1811	No
41	Bcl2	3870	0.174	0.1617	No
42	Irs2	4577	0.119	0.1071	No
43	Gpc3	4880	0.099	0.0850	No
44	Tnfaip3	4895	0.098	0.0865	No
45	Slc25a1	4897	0.098	0.0890	No
46	Chst2	5098	0.083	0.0748	No
47	Pygm	5119	0.082	0.0753	No
48	Ndst1	5165	0.079	0.0738	No
49	Tgfbi	5287	0.070	0.0657	No
50	Tiparp	5331	0.067	0.0640	No
51	Foxo3	5340	0.067	0.0651	No
52	Fosl2	5429	0.060	0.0595	No
53	Cdkn1b	5586	0.050	0.0481	No
54	Hdlbp	5650	0.046	0.0441	No
55	Gpc1	5696	0.043	0.0416	No
56	Sdc2	5759	0.038	0.0375	No
57	Tes	5767	0.038	0.0379	No
58	Hexa	5906	0.026	0.0273	No
59	Pdk1	5930	0.024	0.0261	No
60	Nedd4l	6170	0.008	0.0068	No
61	Dtna	6183	0.008	0.0060	No
62	Ak4	6306	-0.000	-0.0040	No
63	Atp7a	6345	-0.003	-0.0070	No
64	Casp6	6471	-0.011	-0.0169	No
65	Pnrc1	6612	-0.020	-0.0279	No
66	Hspa5	6839	-0.036	-0.0454	No
67	Sdc3	6870	-0.039	-0.0468	No
68	Ilvbl	6871	-0.039	-0.0458	No
69	Ugp2	6972	-0.045	-0.0528	No
70	Gpi1	7048	-0.049	-0.0576	No
71	Ccng2	7072	-0.051	-0.0581	No
72	Efna1	7081	-0.052	-0.0574	No
73	Tgm2	7321	-0.068	-0.0751	No
74	P4ha1	7339	-0.070	-0.0747	No
75	Pgk1	7497	-0.079	-0.0854	No
76	Map3k1	7509	-0.080	-0.0842	No
77	Dusp1	7523	-0.081	-0.0831	No
78	Prkca	7563	-0.084	-0.0841	No
79	Ext1	7612	-0.088	-0.0857	No
80	Glrx	7965	-0.112	-0.1115	No
81	Tpi1	8179	-0.127	-0.1256	No
82	Aldoc	8402	-0.143	-0.1399	No
83	Siah2	8406	-0.143	-0.1364	No
84	Ddit4	8415	-0.143	-0.1333	No
85	Mif	8580	-0.153	-0.1426	No
86	Scarb1	8641	-0.158	-0.1434	No
87	Bgn	8798	-0.170	-0.1516	No
88	Xpnpep1	8876	-0.176	-0.1532	No
89	Ier3	8956	-0.182	-0.1549	No
90	Hk1	9031	-0.187	-0.1560	No
91	Klf6	9283	-0.206	-0.1711	No
92	Jun	9330	-0.210	-0.1693	No
93	Pfkfb3	9417	-0.217	-0.1706	No
94	Vhl	9439	-0.219	-0.1665	No
95	Galk1	9548	-0.228	-0.1693	No
96	Plaur	9560	-0.229	-0.1641	No
97	Ldha	9618	-0.234	-0.1626	No
98	Vldlr	9670	-0.238	-0.1604	No
99	Btg1	9739	-0.244	-0.1596	No
100	Prdx5	9770	-0.246	-0.1555	No
101	Cdkn1c	9808	-0.248	-0.1520	No
102	Pfkl	9824	-0.249	-0.1466	No
103	Cxcr4	9867	-0.253	-0.1433	No
104	Rbpj	9873	-0.253	-0.1370	No
105	Pgm1	9890	-0.255	-0.1316	No
106	Nr3c1	9926	-0.258	-0.1276	No
107	Gcnt2	10097	-0.270	-0.1344	No
108	Aldoa	10161	-0.277	-0.1322	No
109	Sap30	10175	-0.278	-0.1259	No
110	Rora	10221	-0.281	-0.1222	No
111	Zfp36	10295	-0.289	-0.1205	No
112	Pklr	10364	-0.296	-0.1182	No
113	Plac8	10422	-0.303	-0.1148	No
114	Ets1	10567	-0.318	-0.1182	No
115	Klf7	10603	-0.322	-0.1126	No
116	Anxa2	10609	-0.322	-0.1044	No
117	Gbe1	10685	-0.330	-0.1018	No
118	Klhl24	10774	-0.341	-0.1000	No
119	Cavin1	10791	-0.343	-0.0922	No
120	Zfp292	10890	-0.356	-0.0908	No
121	Pim1	10911	-0.358	-0.0830	No
122	Grhpr	10927	-0.359	-0.0747	No
123	Slc2a3	10971	-0.364	-0.0686	No
124	Plin2	11301	-0.412	-0.0846	No
125	Nagk	11488	-0.444	-0.0880	No
126	Ndrg1	11554	-0.458	-0.0812	No
127	Bhlhe40	11637	-0.472	-0.0754	No
128	Pdk3	11750	-0.495	-0.0715	No
129	Fos	11783	-0.502	-0.0608	No
130	Kif5a	11869	-0.536	-0.0536	No
131	Cited2	11953	-0.564	-0.0454	No
132	Pgm2	11954	-0.564	-0.0305	No
133	Mxi1	12016	-0.586	-0.0200	No
134	Large1	12109	-0.635	-0.0107	No
135	Ppargc1a	12356	-1.186	0.0006	No