Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group1_versus_Group2.HSC_Pheno.cls#Group1_versus_Group2_repos
Phenotype	HSC_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	0.20226298
Normalized Enrichment Score (NES)	0.92482895
Nominal p-value	0.66536206
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gnai3	44	1.069	0.0265	Yes
2	Raf1	85	0.950	0.0499	Yes
3	Ctsd	205	0.789	0.0624	Yes
4	Casp4	429	0.660	0.0628	Yes
5	Rnf4	541	0.625	0.0713	Yes
6	Cpm	546	0.623	0.0885	Yes
7	Fyn	558	0.619	0.1050	Yes
8	Ehd1	589	0.609	0.1197	Yes
9	F5	667	0.587	0.1299	Yes
10	Pfn1	693	0.581	0.1442	Yes
11	Lap3	769	0.560	0.1538	Yes
12	Dock4	847	0.539	0.1627	Yes
13	Stx4a	976	0.509	0.1665	Yes
14	Akap10	1395	0.437	0.1447	Yes
15	Grb2	1403	0.435	0.1563	Yes
16	Maff	1444	0.429	0.1652	Yes
17	Atox1	1483	0.425	0.1740	Yes
18	Spock2	1557	0.415	0.1797	Yes
19	Pdgfb	1782	0.382	0.1722	Yes
20	Gng2	1834	0.376	0.1786	Yes
21	Usp14	1929	0.363	0.1812	Yes
22	Prdm4	2044	0.349	0.1816	Yes
23	Was	2174	0.334	0.1805	Yes
24	Rabif	2178	0.333	0.1896	Yes
25	F8	2371	0.311	0.1827	Yes
26	Ctsh	2391	0.309	0.1899	Yes
27	Dusp6	2434	0.305	0.1950	Yes
28	Lck	2513	0.294	0.1969	Yes
29	Me1	2548	0.290	0.2023	Yes
30	Dgkh	2660	0.279	0.2011	No
31	Dock10	2881	0.258	0.1903	No
32	Mmp14	3109	0.235	0.1784	No
33	Plek	3148	0.233	0.1819	No
34	Jak2	3373	0.216	0.1696	No
35	Irf1	3459	0.209	0.1686	No
36	Brpf3	3471	0.207	0.1735	No
37	Gp9	3696	0.187	0.1605	No
38	Dgkg	3740	0.184	0.1621	No
39	Ctsl	3945	0.168	0.1502	No
40	Vcpip1	4043	0.159	0.1467	No
41	Pla2g4a	4544	0.122	0.1093	No
42	Tnfaip3	4895	0.098	0.0835	No
43	Ctsc	4912	0.097	0.0849	No
44	Fdx1	5141	0.081	0.0686	No
45	Calm1	5266	0.072	0.0605	No
46	Cd46	5334	0.067	0.0569	No
47	Casp9	5372	0.064	0.0557	No
48	Casp7	6009	0.019	0.0043	No
49	Sirt6	6038	0.017	0.0025	No
50	Calm3	6080	0.014	-0.0005	No
51	Cr2	6222	0.005	-0.0119	No
52	S100a9	6294	0.000	-0.0177	No
53	Adam9	6381	-0.006	-0.0245	No
54	Kif2a	6548	-0.016	-0.0377	No
55	Sh2b3	6611	-0.020	-0.0422	No
56	Irf7	6627	-0.021	-0.0428	No
57	Hspa5	6839	-0.036	-0.0590	No
58	Lta4h	6842	-0.036	-0.0582	No
59	Lipa	7219	-0.061	-0.0872	No
60	Lrp1	7273	-0.064	-0.0897	No
61	Casp1	7365	-0.071	-0.0951	No
62	Cblb	7402	-0.073	-0.0960	No
63	Kcnip3	7459	-0.077	-0.0984	No
64	S100a13	7759	-0.099	-0.1200	No
65	Prkcd	7817	-0.103	-0.1218	No
66	Clu	7877	-0.108	-0.1236	No
67	Msrb1	8323	-0.137	-0.1561	No
68	Rhog	8337	-0.138	-0.1533	No
69	Gnb2	8356	-0.140	-0.1508	No
70	Cpq	8364	-0.140	-0.1474	No
71	Usp8	8587	-0.154	-0.1612	No
72	Dpp4	8622	-0.157	-0.1596	No
73	Lyn	8785	-0.169	-0.1681	No
74	Xpnpep1	8876	-0.176	-0.1705	No
75	Dusp5	8899	-0.178	-0.1673	No
76	Timp2	9048	-0.189	-0.1740	No
77	Lcp2	9055	-0.190	-0.1692	No
78	Dyrk2	9101	-0.192	-0.1675	No
79	Gnai2	9162	-0.197	-0.1668	No
80	Ctsb	9222	-0.201	-0.1660	No
81	Ctss	9266	-0.204	-0.1638	No
82	Pik3r5	9363	-0.213	-0.1656	No
83	Pdp1	9511	-0.225	-0.1713	No
84	Src	9519	-0.226	-0.1655	No
85	Plaur	9560	-0.229	-0.1624	No
86	Usp16	9567	-0.229	-0.1564	No
87	Lamp2	9611	-0.233	-0.1533	No
88	Gmfb	9637	-0.236	-0.1488	No
89	Prep	9646	-0.236	-0.1428	No
90	Rbsn	9809	-0.248	-0.1490	No
91	Rce1	9811	-0.248	-0.1421	No
92	Pik3cg	10078	-0.269	-0.1563	No
93	Zeb1	10096	-0.270	-0.1501	No
94	Psen1	10194	-0.280	-0.1501	No
95	Gnb4	10208	-0.280	-0.1433	No
96	Kynu	10370	-0.296	-0.1481	No
97	Psmb9	10544	-0.315	-0.1534	No
98	Pclo	10575	-0.319	-0.1469	No
99	Car2	10699	-0.331	-0.1476	No
100	Ppp2cb	10714	-0.333	-0.1394	No
101	Itgam	10734	-0.336	-0.1315	No
102	Pim1	10911	-0.358	-0.1358	No
103	Ctso	11004	-0.369	-0.1329	No
104	Ppp4c	11019	-0.372	-0.1236	No
105	Gca	11039	-0.375	-0.1146	No
106	Prss36	11173	-0.393	-0.1144	No
107	Gata3	11300	-0.412	-0.1131	No
108	Csrp1	11364	-0.424	-0.1063	No
109	Irf2	11374	-0.426	-0.0951	No
110	Usp15	11377	-0.426	-0.0833	No
111	Gpd2	11699	-0.485	-0.0959	No
112	Casp3	12023	-0.589	-0.1057	No
113	Plscr1	12033	-0.594	-0.0897	No
114	Dock9	12047	-0.600	-0.0739	No
115	Anxa5	12063	-0.609	-0.0580	No
116	Pik3ca	12115	-0.639	-0.0442	No
117	C2	12188	-0.701	-0.0303	No
118	Col4a2	12217	-0.724	-0.0123	No
119	Prcp	12301	-0.857	0.0051	No