Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	HSC.HSC_Pheno.cls#Group1_versus_Group2.HSC_Pheno.cls#Group1_versus_Group2_repos
Phenotype	HSC_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.30150428
Normalized Enrichment Score (NES)	1.2697085
Nominal p-value	0.1118421
FDR q-value	1.0
FWER p-Value	0.837

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Itga10	58	1.033	0.0224	Yes
2	Rasa1	66	1.009	0.0483	Yes
3	Insig1	74	0.992	0.0738	Yes
4	Inppl1	79	0.973	0.0991	Yes
5	Amigo1	133	0.863	0.1174	Yes
6	Ctnnd1	259	0.746	0.1268	Yes
7	Vasp	277	0.735	0.1447	Yes
8	Mpzl1	316	0.712	0.1603	Yes
9	Cadm2	341	0.697	0.1767	Yes
10	Shroom2	354	0.688	0.1938	Yes
11	Nf2	532	0.628	0.1958	Yes
12	Pfn1	693	0.581	0.1980	Yes
13	Ikbkg	791	0.555	0.2046	Yes
14	B4galt1	952	0.513	0.2050	Yes
15	Stx4a	976	0.509	0.2165	Yes
16	Cx3cl1	1041	0.492	0.2242	Yes
17	Cd274	1124	0.477	0.2301	Yes
18	Nf1	1133	0.476	0.2419	Yes
19	Rras	1138	0.475	0.2541	Yes
20	Cd276	1203	0.465	0.2611	Yes
21	Fbn1	1223	0.463	0.2717	Yes
22	Sorbs3	1428	0.433	0.2663	Yes
23	Gtf2f1	1484	0.425	0.2730	Yes
24	Tmem8b	1598	0.410	0.2746	Yes
25	Myh9	1631	0.405	0.2826	Yes
26	Col16a1	1635	0.405	0.2930	Yes
27	Mapk14	1853	0.375	0.2851	Yes
28	Rac2	1915	0.366	0.2897	Yes
29	Map3k20	2070	0.346	0.2862	Yes
30	Pbx2	2136	0.340	0.2898	Yes
31	Vcan	2141	0.339	0.2984	Yes
32	Skap2	2210	0.329	0.3015	Yes
33	Itgb1	2477	0.299	0.2876	No
34	Ldlrap1	2589	0.287	0.2861	No
35	Tubg1	2792	0.267	0.2766	No
36	Traf1	2807	0.266	0.2825	No
37	Tial1	2904	0.256	0.2813	No
38	Icam1	3175	0.230	0.2653	No
39	Map4k2	3297	0.221	0.2612	No
40	Vav2	3399	0.214	0.2586	No
41	Sirpa	3523	0.203	0.2539	No
42	Nectin4	3585	0.196	0.2540	No
43	Baiap2	3650	0.191	0.2538	No
44	Akt3	3858	0.176	0.2415	No
45	Cercam	3920	0.170	0.2410	No
46	Nrap	3941	0.168	0.2438	No
47	Akt2	3974	0.166	0.2455	No
48	Zyx	4479	0.126	0.2077	No
49	Gnai1	4787	0.104	0.1853	No
50	Jam3	4800	0.103	0.1870	No
51	Sympk	4942	0.095	0.1780	No
52	Fscn1	5234	0.074	0.1562	No
53	Tgfbi	5287	0.070	0.1538	No
54	Arpc2	5289	0.070	0.1555	No
55	Pkd1	5543	0.053	0.1363	No
56	Tsc1	5623	0.048	0.1311	No
57	Nlgn2	5669	0.044	0.1285	No
58	Vcl	5718	0.041	0.1257	No
59	Evl	5850	0.031	0.1158	No
60	Layn	6089	0.013	0.0967	No
61	Cntn1	6349	-0.003	0.0756	No
62	Myh10	6359	-0.004	0.0750	No
63	Adam9	6381	-0.006	0.0734	No
64	Cap1	6387	-0.006	0.0732	No
65	Ptk2	6425	-0.008	0.0704	No
66	Itga3	6440	-0.009	0.0695	No
67	Kcnh2	6494	-0.012	0.0655	No
68	Pten	6639	-0.022	0.0543	No
69	Bmp1	6691	-0.024	0.0508	No
70	Lima1	6862	-0.038	0.0379	No
71	Sdc3	6870	-0.039	0.0383	No
72	Actn4	7250	-0.063	0.0090	No
73	Itga2	7361	-0.071	0.0019	No
74	Nrtn	7516	-0.081	-0.0086	No
75	Pard6g	7811	-0.103	-0.0299	No
76	Myl12b	7863	-0.106	-0.0313	No
77	Pals1	7955	-0.111	-0.0358	No
78	Tspan4	8151	-0.125	-0.0484	No
79	Cnn2	8189	-0.128	-0.0481	No
80	Exoc4	8301	-0.135	-0.0536	No
81	Plcg1	8326	-0.137	-0.0520	No
82	Dhx16	8332	-0.138	-0.0488	No
83	Jup	8340	-0.138	-0.0457	No
84	Speg	8403	-0.143	-0.0470	No
85	Syk	8509	-0.149	-0.0517	No
86	Taok2	8604	-0.155	-0.0553	No
87	Wasl	8618	-0.156	-0.0523	No
88	Hadh	8644	-0.158	-0.0502	No
89	Nrxn2	9077	-0.191	-0.0804	No
90	Tro	9082	-0.191	-0.0757	No
91	Gnai2	9162	-0.197	-0.0770	No
92	Msn	9213	-0.200	-0.0758	No
93	Dlg1	9229	-0.201	-0.0718	No
94	Epb41l2	9261	-0.203	-0.0690	No
95	Lamb3	9286	-0.206	-0.0655	No
96	Pecam1	9438	-0.219	-0.0721	No
97	Src	9519	-0.226	-0.0727	No
98	Rsu1	9539	-0.228	-0.0683	No
99	Sgce	9674	-0.239	-0.0729	No
100	Rhof	9912	-0.256	-0.0856	No
101	Ptprc	9917	-0.257	-0.0791	No
102	Lama3	9977	-0.261	-0.0771	No
103	Cd86	10075	-0.269	-0.0780	No
104	Ywhah	10156	-0.276	-0.0772	No
105	Itga9	10403	-0.300	-0.0895	No
106	Ctnna1	10505	-0.311	-0.0896	No
107	Actb	10521	-0.313	-0.0826	No
108	Actn1	10566	-0.318	-0.0778	No
109	Vwf	10585	-0.320	-0.0709	No
110	Nectin3	10614	-0.322	-0.0647	No
111	Mmp2	11057	-0.378	-0.0909	No
112	Slit2	11224	-0.399	-0.0940	No
113	Adam15	11234	-0.401	-0.0842	No
114	Shc1	11272	-0.407	-0.0765	No
115	Nectin1	11402	-0.431	-0.0757	No
116	Tjp1	11624	-0.470	-0.0814	No
117	Icam2	11704	-0.486	-0.0751	No
118	Amigo2	11965	-0.567	-0.0814	No
119	Crat	12149	-0.667	-0.0789	No
120	Cdk8	12186	-0.699	-0.0634	No
121	Actg1	12196	-0.708	-0.0456	No
122	Arhgef6	12224	-0.735	-0.0285	No
123	Pik3cb	12231	-0.742	-0.0095	No
124	Cd34	12250	-0.768	0.0092	No