Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group6_versus_Group8.GMP.neu_Pheno.cls #Group6_versus_Group8_repos
Phenotype	GMP.neu_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	4
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.23486687
Normalized Enrichment Score (NES)	0.97499156
Nominal p-value	0.4940945
FDR q-value	0.7353829
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gsn	9	1.326	0.0299	Yes
2	Mybpc3	12	1.294	0.0595	Yes
3	Smtn	98	0.940	0.0768	Yes
4	Dapk2	118	0.917	0.0968	Yes
5	Schip1	370	0.707	0.1004	Yes
6	Fst	521	0.655	0.1079	Yes
7	Nos1	645	0.623	0.1160	Yes
8	Tpm2	686	0.613	0.1280	Yes
9	Sh2b1	997	0.547	0.1250	Yes
10	Psen2	1038	0.542	0.1354	Yes
11	Bhlhe40	1136	0.524	0.1425	Yes
12	Adam12	1174	0.518	0.1525	Yes
13	Pdlim7	1219	0.514	0.1621	Yes
14	Ncam1	1223	0.514	0.1737	Yes
15	Cox7a1	1435	0.484	0.1742	Yes
16	Tnnt3	1686	0.461	0.1722	Yes
17	Myl4	1864	0.439	0.1734	Yes
18	Nav2	1980	0.427	0.1774	Yes
19	Mylk	2040	0.421	0.1841	Yes
20	Cryab	2152	0.407	0.1878	Yes
21	App	2212	0.398	0.1940	Yes
22	Itgb5	2249	0.394	0.2012	Yes
23	Dtna	2276	0.390	0.2088	Yes
24	Ckmt2	2391	0.382	0.2118	Yes
25	Mapre3	2405	0.382	0.2199	Yes
26	Erbb3	2450	0.379	0.2264	Yes
27	Col1a1	2477	0.377	0.2337	Yes
28	Wwtr1	2775	0.357	0.2270	Yes
29	Kcnh2	2782	0.357	0.2349	Yes
30	Acsl1	3199	0.330	0.2215	No
31	Slc6a8	3378	0.321	0.2199	No
32	Ankrd2	3405	0.319	0.2259	No
33	Sh3bgr	3657	0.301	0.2202	No
34	Klf5	3985	0.273	0.2100	No
35	Sorbs3	4014	0.272	0.2149	No
36	Cdh13	4171	0.263	0.2131	No
37	Myoz1	4320	0.254	0.2114	No
38	Myh9	4454	0.245	0.2104	No
39	Cnn3	4641	0.235	0.2064	No
40	Tsc2	5038	0.212	0.1913	No
41	Svil	5113	0.209	0.1924	No
42	Sirt2	5164	0.205	0.1946	No
43	Adcy9	5188	0.204	0.1981	No
44	Foxo4	5224	0.202	0.2010	No
45	Sptan1	5250	0.201	0.2043	No
46	Aplnr	5264	0.200	0.2082	No
47	Lsp1	5406	0.199	0.2057	No
48	Myh8	5579	0.191	0.2014	No
49	Notch1	5778	0.183	0.1957	No
50	Ache	6026	0.171	0.1872	No
51	Sparc	6210	0.166	0.1818	No
52	Ak1	6377	0.158	0.1770	No
53	Myom1	6444	0.154	0.1772	No
54	Large1	6659	0.143	0.1698	No
55	Pygm	7050	0.127	0.1531	No
56	Myl6b	7125	0.123	0.1522	No
57	Dmpk	7233	0.118	0.1495	No
58	Rb1	7251	0.117	0.1513	No
59	Sgcd	7355	0.112	0.1487	No
60	Gnao1	7359	0.112	0.1511	No
61	Sphk1	7458	0.107	0.1486	No
62	Igfbp7	7800	0.093	0.1336	No
63	Tnnt1	7960	0.087	0.1276	No
64	Pick1	8063	0.083	0.1244	No
65	Pfkm	8273	0.074	0.1155	No
66	Gja5	8403	0.068	0.1106	No
67	Tnnc1	8406	0.068	0.1121	No
68	Hbegf	8523	0.064	0.1077	No
69	Gaa	8821	0.052	0.0940	No
70	Akt2	9150	0.039	0.0784	No
71	Lama2	9183	0.038	0.0776	No
72	Tgfb1	9241	0.035	0.0756	No
73	Mef2d	9335	0.031	0.0716	No
74	Ifrd1	9406	0.028	0.0687	No
75	Agl	9784	0.013	0.0501	No
76	Flii	9966	0.005	0.0411	No
77	Agrn	10600	-0.011	0.0095	No
78	Actn3	10746	-0.016	0.0025	No
79	Fhl1	10775	-0.017	0.0015	No
80	Nqo1	10796	-0.017	0.0009	No
81	Pcx	10867	-0.019	-0.0022	No
82	Pde4dip	11074	-0.028	-0.0119	No
83	Tagln	11270	-0.036	-0.0209	No
84	Rit1	11274	-0.036	-0.0202	No
85	Ocel1	11344	-0.038	-0.0228	No
86	Clu	11633	-0.050	-0.0361	No
87	Tpm3	12033	-0.068	-0.0546	No
88	Syngr2	12481	-0.087	-0.0751	No
89	Myom2	12793	-0.101	-0.0884	No
90	Col15a1	13726	-0.140	-0.1321	No
91	Tnni2	13881	-0.147	-0.1364	No
92	Mylpf	14593	-0.177	-0.1681	No
93	Eno3	14598	-0.177	-0.1643	No
94	Atp2a1	14630	-0.179	-0.1617	No
95	Mef2a	14633	-0.179	-0.1577	No
96	Csrp3	14909	-0.193	-0.1671	No
97	Itgb1	14925	-0.193	-0.1635	No
98	Ctf1	14957	-0.195	-0.1606	No
99	Ppfia4	15281	-0.210	-0.1720	No
100	Eif4a2	15406	-0.216	-0.1733	No
101	Col4a2	15442	-0.218	-0.1700	No
102	Tpd52l1	15502	-0.221	-0.1679	No
103	Gabarapl2	15771	-0.234	-0.1760	No
104	Reep1	15816	-0.237	-0.1728	No
105	Lpin1	15829	-0.237	-0.1680	No
106	Kcnh1	15987	-0.245	-0.1703	No
107	Ptp4a3	16183	-0.256	-0.1742	No
108	Hdac5	16217	-0.258	-0.1699	No
109	Actn2	16411	-0.266	-0.1735	No
110	Crat	16469	-0.271	-0.1702	No
111	Gadd45b	16482	-0.272	-0.1646	No
112	Gpx3	16590	-0.276	-0.1636	No
113	Myh11	16884	-0.295	-0.1716	No
114	Fkbp1b	16956	-0.300	-0.1683	No
115	Fdps	16973	-0.301	-0.1622	No
116	Myo1c	17011	-0.303	-0.1571	No
117	Cdkn1a	17015	-0.304	-0.1503	No
118	Igf1	17088	-0.309	-0.1468	No
119	Mras	17263	-0.320	-0.1482	No
120	Atp6ap1	17528	-0.336	-0.1538	No
121	Mef2c	17696	-0.347	-0.1543	No
122	Camk2b	17723	-0.350	-0.1476	No
123	Kifc3	17995	-0.372	-0.1526	No
124	Itgb4	18261	-0.396	-0.1569	No
125	Ryr1	18428	-0.411	-0.1558	No
126	Fgf2	18566	-0.426	-0.1530	No
127	Cfd	18754	-0.450	-0.1520	No
128	Prnp	19315	-0.547	-0.1677	No
129	Pgam2	19501	-0.599	-0.1633	No
130	Bag1	19515	-0.604	-0.1501	No
131	Cd36	19530	-0.607	-0.1369	No
132	Ablim1	19683	-0.669	-0.1292	No
133	Cacna1h	19697	-0.675	-0.1143	No
134	Pkia	19744	-0.701	-0.1006	No
135	Bin1	19804	-0.730	-0.0868	No
136	Sorbs1	19814	-0.734	-0.0704	No
137	Dmd	19824	-0.742	-0.0539	No
138	Plxnb2	19833	-0.750	-0.0371	No
139	Chrnb1	19911	-0.818	-0.0222	No
140	Stc2	20023	-1.219	0.0002	No