DatasetGMP.GMP.neu_Pheno.cls
#Group6_versus_Group8.GMP.neu_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeGMP.neu_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.41081035
Normalized Enrichment Score (NES)-1.4053695
Nominal p-value0.13265306
FDR q-value0.16167381
FWER p-Value0.556
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ube2l64080.6940.0053No
2Ccrl24450.6780.0286No
3Mx24720.6690.0521No
4Isg206250.6260.0676No
5Il710190.5430.0681No
6Batf221880.4010.0244No
7Lpar623440.3860.0309No
8Cnp25990.3690.0318No
9Ifi4427520.3590.0375No
10Tmem14035090.3130.0112No
11Trim1440220.271-0.0044No
12Mvb12a40860.2670.0023No
13Irf252130.202-0.0467No
14Stat255190.193-0.0548No
15Ripk259200.175-0.0684No
16Herc665510.149-0.0945No
17Parp969820.130-0.1112No
18Procr73740.111-0.1267No
19Il4ra77840.093-0.1438No
20Txnip86760.058-0.1863No
21Adar90360.044-0.2027No
22Eif2ak293910.029-0.2194No
23Il1595130.024-0.2246No
24Usp1898430.010-0.2407No
25Ifit310625-0.011-0.2795No
26Isg1510909-0.021-0.2929No
27Plscr110929-0.022-0.2930No
28Cmtr111114-0.030-0.3012No
29Trim2511287-0.037-0.3084No
30Cxcl1011335-0.038-0.3094No
31Casp811743-0.055-0.3278No
32Elf111858-0.060-0.3313No
33Wars112106-0.071-0.3410No
34Dhx5812599-0.093-0.3622No
35Psma312965-0.107-0.3766No
36Rnf3113006-0.109-0.3746No
37Pnpt113051-0.110-0.3727No
38Ifi2713262-0.120-0.3787No
39Cd4713623-0.136-0.3918No
40Tdrd713773-0.142-0.3940No
41Ifih113867-0.146-0.3933No
42Helz213993-0.151-0.3939No
43Irf914030-0.153-0.3901No
44Irf714372-0.167-0.4010No
45Ifitm214538-0.174-0.4028No
46Sell14582-0.177-0.3984No
47Ncoa714614-0.178-0.3934No
48Uba714628-0.179-0.3874No
49Tent5a15001-0.197-0.3988No
50Ddx6015242-0.208-0.4031Yes
51Samd9l15376-0.215-0.4018Yes
52Nub115479-0.220-0.3988Yes
53Cd7415567-0.224-0.3949Yes
54Trim2615600-0.226-0.3881Yes
55Trafd115666-0.229-0.3829Yes
56Irf115681-0.230-0.3751Yes
57Psmb915702-0.230-0.3675Yes
58Trim12c16065-0.250-0.3764Yes
59Nmi16326-0.262-0.3797Yes
60Ifi3516418-0.267-0.3744Yes
61Oas1a16486-0.272-0.3677Yes
62Rsad216497-0.273-0.3581Yes
63Slc25a2816904-0.297-0.3675Yes
64Lap317080-0.309-0.3648Yes
65Lgals3bp17304-0.323-0.3640Yes
66Sp11017320-0.324-0.3527Yes
67Tap117500-0.335-0.3493Yes
68Mov1017545-0.337-0.3390Yes
69Psmb817585-0.339-0.3284Yes
70Ifitm317656-0.344-0.3192Yes
71Cmpk217842-0.359-0.3151Yes
72Parp1418077-0.380-0.3128Yes
73Trim2118210-0.391-0.3049Yes
74Ifit218244-0.394-0.2920Yes
75Csf118247-0.394-0.2775Yes
76Psme118376-0.406-0.2688Yes
77Bst218481-0.417-0.2586Yes
78Gmpr18494-0.418-0.2437Yes
79Epsti118998-0.485-0.2510Yes
80Ifitm119093-0.502-0.2371Yes
81Rtp419345-0.553-0.2292Yes
82Ogfr19510-0.602-0.2151Yes
83B2m19605-0.640-0.1961Yes
84Casp119689-0.672-0.1753Yes
85Parp1219777-0.719-0.1531Yes
86Psme219802-0.730-0.1272Yes
87Oasl119850-0.761-0.1014Yes
88Ly6e19940-0.858-0.0740Yes
89Ifi3019969-0.904-0.0419Yes
90Gbp320020-1.2070.0003Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE