Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group6_versus_Group8.GMP.neu_Pheno.cls #Group6_versus_Group8_repos
Phenotype	GMP.neu_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_GLYCOLYSIS
Enrichment Score (ES)	-0.27846742
Normalized Enrichment Score (NES)	-1.2815425
Nominal p-value	0.090322584
FDR q-value	0.20116429
FWER p-Value	0.787

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Vegfa	73	0.978	0.0178	No
2	Isg20	625	0.626	0.0038	No
3	Ang	637	0.625	0.0170	No
4	Mxi1	925	0.557	0.0147	No
5	Ldhc	1069	0.536	0.0193	No
6	Gmppb	1093	0.533	0.0299	No
7	Vcan	1158	0.521	0.0381	No
8	Ero1a	1218	0.515	0.0464	No
9	Paxip1	1411	0.486	0.0474	No
10	B4galt2	1413	0.486	0.0580	No
11	Slc35a3	1826	0.443	0.0470	No
12	Irs2	1838	0.442	0.0562	No
13	Depdc1a	1901	0.436	0.0626	No
14	Chst12	1929	0.433	0.0708	No
15	Col5a1	2095	0.415	0.0716	No
16	Bik	2327	0.388	0.0685	No
17	Kif20a	2339	0.386	0.0764	No
18	Chpf2	2465	0.378	0.0784	No
19	Adora2b	2529	0.373	0.0834	No
20	Cxcr4	2750	0.360	0.0802	No
21	Pmm2	2838	0.354	0.0836	No
22	Rragd	2866	0.352	0.0900	No
23	Gpc1	3114	0.338	0.0850	No
24	Sdc2	3224	0.329	0.0867	No
25	Tpst1	3246	0.327	0.0928	No
26	Rpe	3329	0.322	0.0958	No
27	Dcn	3438	0.316	0.0973	No
28	Pygl	3490	0.315	0.1016	No
29	Ext2	3505	0.314	0.1078	No
30	Aurka	3547	0.309	0.1125	No
31	Nsdhl	3728	0.296	0.1100	No
32	Glrx	3734	0.296	0.1162	No
33	Gmppa	3920	0.279	0.1130	No
34	Ndufv3	3981	0.274	0.1160	No
35	Gal3st1	4089	0.267	0.1165	No
36	Chst1	4108	0.266	0.1214	No
37	B4galt1	5235	0.202	0.0691	No
38	Eno2	5556	0.191	0.0572	No
39	Hmmr	5813	0.181	0.0483	No
40	Tgfbi	5957	0.173	0.0449	No
41	Phka2	6176	0.168	0.0376	No
42	Hs6st2	6280	0.163	0.0360	No
43	Med24	6371	0.158	0.0349	No
44	Cenpa	6495	0.152	0.0321	No
45	Mpi	6636	0.144	0.0282	No
46	Sdc1	6848	0.135	0.0205	No
47	Pfkp	6930	0.132	0.0194	No
48	Spag4	7096	0.125	0.0138	No
49	Srd5a3	7905	0.089	-0.0250	No
50	Gys1	8154	0.079	-0.0357	No
51	Nt5e	8212	0.077	-0.0369	No
52	Glce	8260	0.074	-0.0377	No
53	Gapdhs	8336	0.071	-0.0399	No
54	Nanp	8693	0.057	-0.0566	No
55	Cdk1	8908	0.049	-0.0663	No
56	Chpf	8974	0.046	-0.0685	No
57	Pam	9042	0.043	-0.0710	No
58	Gclc	9199	0.037	-0.0780	No
59	Gusb	9309	0.032	-0.0828	No
60	Cth	9440	0.027	-0.0888	No
61	B3gat3	9539	0.023	-0.0932	No
62	Hs2st1	9652	0.018	-0.0984	No
63	Pfkfb1	9661	0.018	-0.0984	No
64	Slc37a4	9681	0.017	-0.0990	No
65	Gfpt1	9700	0.016	-0.0996	No
66	Hdlbp	9716	0.015	-0.1000	No
67	Fbp2	9718	0.015	-0.0998	No
68	Agl	9784	0.013	-0.1028	No
69	Gale	9829	0.011	-0.1047	No
70	Cyb5a	9879	0.008	-0.1070	No
71	Alg1	9977	0.004	-0.1118	No
72	Ankzf1	10366	-0.003	-0.1313	No
73	Psmc4	10515	-0.008	-0.1386	No
74	Agrn	10600	-0.011	-0.1426	No
75	G6pdx	10794	-0.017	-0.1519	No
76	Pcx	10867	-0.019	-0.1551	No
77	B4galt7	10882	-0.020	-0.1554	No
78	B4galt4	11127	-0.030	-0.1670	No
79	Pkm	11129	-0.030	-0.1664	No
80	Ier3	11142	-0.031	-0.1663	No
81	Slc25a13	11154	-0.031	-0.1662	No
82	Hk2	11160	-0.031	-0.1658	No
83	Pygb	11205	-0.033	-0.1673	No
84	Rbck1	11254	-0.035	-0.1689	No
85	Aldh7a1	11308	-0.037	-0.1708	No
86	Ugp2	11707	-0.054	-0.1896	No
87	Sdhc	11761	-0.056	-0.1911	No
88	Galk2	11935	-0.063	-0.1984	No
89	Pgm2	11949	-0.064	-0.1977	No
90	Eno1b	12014	-0.067	-0.1994	No
91	Slc16a3	12063	-0.069	-0.2003	No
92	Cd44	12079	-0.069	-0.1996	No
93	P4ha1	12156	-0.073	-0.2018	No
94	Ppp2cb	12325	-0.080	-0.2085	No
95	Tgfa	12361	-0.082	-0.2084	No
96	Qsox1	12466	-0.087	-0.2118	No
97	Idua	12521	-0.089	-0.2125	No
98	Ecd	12667	-0.096	-0.2177	No
99	Plod1	12724	-0.099	-0.2184	No
100	Zfp292	12783	-0.101	-0.2191	No
101	Ddit4	12977	-0.108	-0.2264	No
102	Lhpp	13030	-0.110	-0.2267	No
103	Aldoa	13127	-0.114	-0.2290	No
104	Fut8	13408	-0.126	-0.2403	No
105	Cln6	13490	-0.130	-0.2415	No
106	Gfus	13502	-0.130	-0.2392	No
107	Pdk3	13557	-0.132	-0.2390	No
108	Me2	13608	-0.135	-0.2386	No
109	Gne	13682	-0.138	-0.2392	No
110	Met	13704	-0.139	-0.2373	No
111	Cog2	13730	-0.140	-0.2354	No
112	Xylt2	13856	-0.145	-0.2386	No
113	Galk1	13900	-0.147	-0.2375	No
114	Got2	14067	-0.154	-0.2425	No
115	Nasp	14380	-0.167	-0.2545	No
116	Sap30	14403	-0.168	-0.2519	No
117	Pkp2	14457	-0.171	-0.2508	No
118	Il13ra1	14615	-0.178	-0.2548	No
119	Pgls	14622	-0.179	-0.2512	No
120	Egfr	14654	-0.180	-0.2488	No
121	Idh1	14657	-0.180	-0.2450	No
122	Hspa5	14674	-0.181	-0.2418	No
123	Ndst3	14921	-0.193	-0.2499	No
124	Lhx9	15020	-0.198	-0.2505	No
125	Ppfia4	15281	-0.210	-0.2590	No
126	Slc25a10	15343	-0.214	-0.2574	No
127	Gpc4	15584	-0.225	-0.2645	No
128	Ak3	15703	-0.231	-0.2654	No
129	B3galt6	15777	-0.234	-0.2640	No
130	Arpp19	15863	-0.239	-0.2630	No
131	Kif2a	15988	-0.245	-0.2639	No
132	Gpr87	16279	-0.261	-0.2727	Yes
133	Vldlr	16325	-0.262	-0.2692	Yes
134	Me1	16460	-0.270	-0.2701	Yes
135	Copb2	16612	-0.277	-0.2716	Yes
136	Dld	16678	-0.281	-0.2687	Yes
137	Lct	16754	-0.287	-0.2661	Yes
138	Homer1	16843	-0.293	-0.2641	Yes
139	Stmn1	16851	-0.294	-0.2580	Yes
140	Cited2	16868	-0.294	-0.2524	Yes
141	Hax1	16906	-0.297	-0.2477	Yes
142	B3gnt3	16993	-0.302	-0.2454	Yes
143	Abcb6	17061	-0.307	-0.2420	Yes
144	Txn1	17081	-0.309	-0.2362	Yes
145	Mertk	17097	-0.310	-0.2302	Yes
146	Gnpda1	17433	-0.330	-0.2398	Yes
147	Pgk1	17541	-0.337	-0.2378	Yes
148	Pgam1	17567	-0.338	-0.2316	Yes
149	Taldo1	17569	-0.338	-0.2242	Yes
150	Prps1	17594	-0.340	-0.2180	Yes
151	Plod2	17779	-0.354	-0.2195	Yes
152	Mdh2	17816	-0.357	-0.2134	Yes
153	Ext1	17844	-0.359	-0.2069	Yes
154	Ppia	17951	-0.370	-0.2041	Yes
155	Sdc3	18145	-0.386	-0.2054	Yes
156	Ak4	18187	-0.389	-0.1989	Yes
157	Casp6	18406	-0.408	-0.2009	Yes
158	Polr3k	18523	-0.421	-0.1975	Yes
159	Egln3	18610	-0.431	-0.1923	Yes
160	Kdelr3	18944	-0.477	-0.1986	Yes
161	Akr1a1	19074	-0.499	-0.1942	Yes
162	Fkbp4	19136	-0.512	-0.1860	Yes
163	Ldha	19167	-0.518	-0.1761	Yes
164	Fam162a	19214	-0.526	-0.1669	Yes
165	Capn5	19226	-0.529	-0.1558	Yes
166	Aldh9a1	19272	-0.537	-0.1463	Yes
167	Got1	19359	-0.557	-0.1384	Yes
168	Bpnt1	19451	-0.581	-0.1302	Yes
169	Mif	19463	-0.587	-0.1179	Yes
170	Pgam2	19501	-0.599	-0.1066	Yes
171	Tpi1	19523	-0.605	-0.0944	Yes
172	Cacna1h	19697	-0.675	-0.0882	Yes
173	Gpc3	19785	-0.722	-0.0768	Yes
174	Sod1	19805	-0.730	-0.0617	Yes
175	Mdh1	19872	-0.784	-0.0478	Yes
176	Stc2	20023	-1.219	-0.0286	Yes
177	Angptl4	20025	-1.304	0.0001	Yes