| Dataset | GMP.GMP.neu_Pheno.cls #Group6_versus_Group8.GMP.neu_Pheno.cls #Group6_versus_Group8_repos |
| Phenotype | GMP.neu_Pheno.cls#Group6_versus_Group8_repos |
| Upregulated in class | 5 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_EARLY |
| Enrichment Score (ES) | -0.27861947 |
| Normalized Enrichment Score (NES) | -1.2296742 |
| Nominal p-value | 0.08559499 |
| FDR q-value | 0.25949097 |
| FWER p-Value | 0.866 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Klf4 | 126 | 0.901 | 0.0140 | No |
| 2 | Pdzk1 | 169 | 0.849 | 0.0310 | No |
| 3 | Mindy1 | 590 | 0.635 | 0.0242 | No |
| 4 | Mreg | 726 | 0.603 | 0.0310 | No |
| 5 | Wfs1 | 981 | 0.550 | 0.0307 | No |
| 6 | Bhlhe40 | 1136 | 0.524 | 0.0347 | No |
| 7 | Kdm4b | 1271 | 0.507 | 0.0394 | No |
| 8 | Aldh3b1 | 1287 | 0.503 | 0.0500 | No |
| 9 | Clic3 | 1647 | 0.463 | 0.0424 | No |
| 10 | Slc27a2 | 1666 | 0.462 | 0.0519 | No |
| 11 | Aff1 | 1713 | 0.458 | 0.0599 | No |
| 12 | Tiam1 | 1796 | 0.447 | 0.0659 | No |
| 13 | Ncor2 | 1895 | 0.436 | 0.0708 | No |
| 14 | Zfp185 | 1909 | 0.435 | 0.0800 | No |
| 15 | Nav2 | 1980 | 0.427 | 0.0861 | No |
| 16 | Mapt | 2221 | 0.398 | 0.0830 | No |
| 17 | Retreg1 | 2476 | 0.377 | 0.0787 | No |
| 18 | Myof | 3265 | 0.325 | 0.0464 | No |
| 19 | Fos | 3289 | 0.323 | 0.0525 | No |
| 20 | Fhl2 | 3391 | 0.320 | 0.0546 | No |
| 21 | Tmem164 | 3669 | 0.301 | 0.0475 | No |
| 22 | Kcnk5 | 3769 | 0.292 | 0.0491 | No |
| 23 | Itpk1 | 3908 | 0.280 | 0.0485 | No |
| 24 | Rbbp8 | 4036 | 0.270 | 0.0482 | No |
| 25 | Rhod | 4110 | 0.266 | 0.0505 | No |
| 26 | Med13l | 4174 | 0.263 | 0.0533 | No |
| 27 | Rps6ka2 | 4189 | 0.262 | 0.0585 | No |
| 28 | Abhd2 | 4210 | 0.261 | 0.0634 | No |
| 29 | Slc37a1 | 4255 | 0.257 | 0.0669 | No |
| 30 | Hr | 4317 | 0.254 | 0.0696 | No |
| 31 | Igf1r | 4602 | 0.237 | 0.0607 | No |
| 32 | Mybl1 | 4636 | 0.235 | 0.0643 | No |
| 33 | Bcl11b | 4654 | 0.235 | 0.0687 | No |
| 34 | Siah2 | 4783 | 0.228 | 0.0674 | No |
| 35 | Unc119 | 4787 | 0.227 | 0.0724 | No |
| 36 | Svil | 5113 | 0.209 | 0.0608 | No |
| 37 | Elovl5 | 5180 | 0.204 | 0.0620 | No |
| 38 | Adcy9 | 5188 | 0.204 | 0.0663 | No |
| 39 | B4galt1 | 5235 | 0.202 | 0.0685 | No |
| 40 | Elovl2 | 5334 | 0.199 | 0.0681 | No |
| 41 | Il17rb | 5485 | 0.195 | 0.0649 | No |
| 42 | Opn3 | 5520 | 0.193 | 0.0676 | No |
| 43 | Tjp3 | 5816 | 0.181 | 0.0568 | No |
| 44 | Ptges | 5971 | 0.173 | 0.0530 | No |
| 45 | Add3 | 6024 | 0.171 | 0.0542 | No |
| 46 | Cbfa2t3 | 6185 | 0.168 | 0.0499 | No |
| 47 | Gla | 6220 | 0.166 | 0.0520 | No |
| 48 | Med24 | 6371 | 0.158 | 0.0480 | No |
| 49 | Cant1 | 6372 | 0.158 | 0.0515 | No |
| 50 | Myb | 6404 | 0.156 | 0.0535 | No |
| 51 | Dlc1 | 6514 | 0.151 | 0.0514 | No |
| 52 | Krt8 | 6527 | 0.150 | 0.0542 | No |
| 53 | Asb13 | 6569 | 0.148 | 0.0555 | No |
| 54 | Dynlt3 | 6662 | 0.143 | 0.0540 | No |
| 55 | Fkbp5 | 6754 | 0.139 | 0.0526 | No |
| 56 | Mlph | 6875 | 0.134 | 0.0496 | No |
| 57 | Olfml3 | 7030 | 0.128 | 0.0447 | No |
| 58 | Sec14l2 | 7074 | 0.126 | 0.0454 | No |
| 59 | Tob1 | 7081 | 0.125 | 0.0479 | No |
| 60 | Syngr1 | 7135 | 0.123 | 0.0480 | No |
| 61 | Slc22a5 | 7234 | 0.118 | 0.0458 | No |
| 62 | Tgm2 | 7259 | 0.116 | 0.0472 | No |
| 63 | Scarb1 | 7387 | 0.111 | 0.0433 | No |
| 64 | Xbp1 | 7709 | 0.097 | 0.0293 | No |
| 65 | Gab2 | 7765 | 0.094 | 0.0287 | No |
| 66 | Abca3 | 7792 | 0.093 | 0.0295 | No |
| 67 | Dhrs3 | 8082 | 0.082 | 0.0168 | No |
| 68 | Celsr1 | 8199 | 0.077 | 0.0127 | No |
| 69 | Rab31 | 8226 | 0.076 | 0.0131 | No |
| 70 | Gfra1 | 8312 | 0.072 | 0.0104 | No |
| 71 | Greb1 | 8402 | 0.068 | 0.0075 | No |
| 72 | Snx24 | 8478 | 0.066 | 0.0052 | No |
| 73 | Chpt1 | 8499 | 0.065 | 0.0056 | No |
| 74 | Slc2a1 | 8677 | 0.058 | -0.0020 | No |
| 75 | Ar | 9046 | 0.043 | -0.0195 | No |
| 76 | Anxa9 | 9538 | 0.023 | -0.0437 | No |
| 77 | Slc19a2 | 9611 | 0.020 | -0.0469 | No |
| 78 | Calb2 | 9918 | 0.006 | -0.0621 | No |
| 79 | Nadsyn1 | 9951 | 0.005 | -0.0636 | No |
| 80 | Sema3b | 10132 | 0.000 | -0.0727 | No |
| 81 | Mpped2 | 10365 | -0.003 | -0.0843 | No |
| 82 | Amfr | 10788 | -0.017 | -0.1052 | No |
| 83 | Bcl2 | 10984 | -0.024 | -0.1145 | No |
| 84 | Dhcr7 | 11009 | -0.025 | -0.1151 | No |
| 85 | Slc7a5 | 11095 | -0.029 | -0.1187 | No |
| 86 | Podxl | 11117 | -0.030 | -0.1191 | No |
| 87 | Abat | 11207 | -0.033 | -0.1228 | No |
| 88 | Pgr | 11314 | -0.038 | -0.1273 | No |
| 89 | Sybu | 11757 | -0.056 | -0.1483 | No |
| 90 | Elf1 | 11858 | -0.060 | -0.1520 | No |
| 91 | Cd44 | 12079 | -0.069 | -0.1615 | No |
| 92 | Tmprss3 | 12144 | -0.073 | -0.1631 | No |
| 93 | Fasn | 12250 | -0.077 | -0.1666 | No |
| 94 | Tiparp | 12291 | -0.079 | -0.1669 | No |
| 95 | Kazn | 12352 | -0.082 | -0.1680 | No |
| 96 | Wwc1 | 12355 | -0.082 | -0.1663 | No |
| 97 | Sh3bp5 | 12408 | -0.085 | -0.1670 | No |
| 98 | Farp1 | 12554 | -0.091 | -0.1722 | No |
| 99 | Arl3 | 13155 | -0.115 | -0.1998 | No |
| 100 | Muc1 | 13305 | -0.122 | -0.2046 | No |
| 101 | Tbc1d30 | 13596 | -0.134 | -0.2162 | No |
| 102 | Ppif | 13676 | -0.138 | -0.2170 | No |
| 103 | Rrp12 | 13756 | -0.141 | -0.2178 | No |
| 104 | Gja1 | 13797 | -0.142 | -0.2166 | No |
| 105 | Krt18 | 13801 | -0.143 | -0.2135 | No |
| 106 | Jak2 | 14148 | -0.158 | -0.2274 | No |
| 107 | Ttc39a | 14153 | -0.158 | -0.2240 | No |
| 108 | Rapgefl1 | 14439 | -0.170 | -0.2345 | No |
| 109 | Sfn | 14719 | -0.184 | -0.2444 | No |
| 110 | Rasgrp1 | 14813 | -0.188 | -0.2449 | No |
| 111 | Blvrb | 15011 | -0.197 | -0.2503 | No |
| 112 | Slc1a4 | 15455 | -0.219 | -0.2677 | No |
| 113 | Tpd52l1 | 15502 | -0.221 | -0.2650 | No |
| 114 | Tgif2 | 15604 | -0.226 | -0.2650 | No |
| 115 | Reep1 | 15816 | -0.237 | -0.2703 | No |
| 116 | Olfm1 | 15942 | -0.243 | -0.2711 | No |
| 117 | Rhobtb3 | 15986 | -0.245 | -0.2677 | No |
| 118 | Inpp5f | 16203 | -0.258 | -0.2728 | Yes |
| 119 | Flnb | 16220 | -0.259 | -0.2678 | Yes |
| 120 | Ccnd1 | 16221 | -0.259 | -0.2619 | Yes |
| 121 | Slc16a1 | 16348 | -0.264 | -0.2623 | Yes |
| 122 | Ugcg | 16610 | -0.277 | -0.2692 | Yes |
| 123 | Akap1 | 16687 | -0.281 | -0.2667 | Yes |
| 124 | Slc26a2 | 16702 | -0.283 | -0.2610 | Yes |
| 125 | Rara | 16716 | -0.284 | -0.2553 | Yes |
| 126 | Rab17 | 16760 | -0.288 | -0.2509 | Yes |
| 127 | Cish | 16800 | -0.290 | -0.2464 | Yes |
| 128 | Sult2b1 | 16860 | -0.294 | -0.2427 | Yes |
| 129 | Slc1a1 | 16914 | -0.298 | -0.2386 | Yes |
| 130 | Klf10 | 17033 | -0.305 | -0.2377 | Yes |
| 131 | Plaat3 | 17175 | -0.315 | -0.2377 | Yes |
| 132 | Nrip1 | 17330 | -0.325 | -0.2381 | Yes |
| 133 | Slc39a6 | 17548 | -0.337 | -0.2414 | Yes |
| 134 | Papss2 | 17578 | -0.339 | -0.2353 | Yes |
| 135 | Cyp26b1 | 17924 | -0.368 | -0.2443 | Yes |
| 136 | Car12 | 17964 | -0.370 | -0.2379 | Yes |
| 137 | Celsr2 | 17972 | -0.371 | -0.2299 | Yes |
| 138 | Nxt1 | 18293 | -0.399 | -0.2370 | Yes |
| 139 | Fdft1 | 18404 | -0.408 | -0.2334 | Yes |
| 140 | Myc | 18603 | -0.431 | -0.2336 | Yes |
| 141 | Isg20l2 | 18614 | -0.431 | -0.2244 | Yes |
| 142 | P2ry2 | 18683 | -0.440 | -0.2179 | Yes |
| 143 | Slc24a3 | 18706 | -0.443 | -0.2090 | Yes |
| 144 | Mybbp1a | 18922 | -0.473 | -0.2091 | Yes |
| 145 | Mast4 | 18985 | -0.483 | -0.2013 | Yes |
| 146 | Lrig1 | 19029 | -0.490 | -0.1925 | Yes |
| 147 | Fkbp4 | 19136 | -0.512 | -0.1863 | Yes |
| 148 | Pmaip1 | 19200 | -0.524 | -0.1776 | Yes |
| 149 | Igfbp4 | 19335 | -0.550 | -0.1719 | Yes |
| 150 | Endod1 | 19336 | -0.551 | -0.1595 | Yes |
| 151 | Scnn1a | 19348 | -0.554 | -0.1476 | Yes |
| 152 | Bag1 | 19515 | -0.604 | -0.1423 | Yes |
| 153 | Deptor | 19591 | -0.630 | -0.1319 | Yes |
| 154 | Ablim1 | 19683 | -0.669 | -0.1213 | Yes |
| 155 | Frk | 19905 | -0.812 | -0.1141 | Yes |
| 156 | Thsd4 | 19990 | -0.961 | -0.0967 | Yes |
| 157 | Il6st | 19995 | -0.977 | -0.0749 | Yes |
| 158 | Slc7a2 | 20010 | -1.046 | -0.0520 | Yes |
| 159 | Pex11a | 20016 | -1.116 | -0.0270 | Yes |
| 160 | Stc2 | 20023 | -1.219 | 0.0002 | Yes |

