DatasetGMP.GMP.neu_Pheno.cls
#Group6_versus_Group8.GMP.neu_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeGMP.neu_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_ESTROGEN_RESPONSE_EARLY
Enrichment Score (ES)-0.27861947
Normalized Enrichment Score (NES)-1.2296742
Nominal p-value0.08559499
FDR q-value0.25949097
FWER p-Value0.866
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_ESTROGEN_RESPONSE_EARLY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Klf41260.9010.0140No
2Pdzk11690.8490.0310No
3Mindy15900.6350.0242No
4Mreg7260.6030.0310No
5Wfs19810.5500.0307No
6Bhlhe4011360.5240.0347No
7Kdm4b12710.5070.0394No
8Aldh3b112870.5030.0500No
9Clic316470.4630.0424No
10Slc27a216660.4620.0519No
11Aff117130.4580.0599No
12Tiam117960.4470.0659No
13Ncor218950.4360.0708No
14Zfp18519090.4350.0800No
15Nav219800.4270.0861No
16Mapt22210.3980.0830No
17Retreg124760.3770.0787No
18Myof32650.3250.0464No
19Fos32890.3230.0525No
20Fhl233910.3200.0546No
21Tmem16436690.3010.0475No
22Kcnk537690.2920.0491No
23Itpk139080.2800.0485No
24Rbbp840360.2700.0482No
25Rhod41100.2660.0505No
26Med13l41740.2630.0533No
27Rps6ka241890.2620.0585No
28Abhd242100.2610.0634No
29Slc37a142550.2570.0669No
30Hr43170.2540.0696No
31Igf1r46020.2370.0607No
32Mybl146360.2350.0643No
33Bcl11b46540.2350.0687No
34Siah247830.2280.0674No
35Unc11947870.2270.0724No
36Svil51130.2090.0608No
37Elovl551800.2040.0620No
38Adcy951880.2040.0663No
39B4galt152350.2020.0685No
40Elovl253340.1990.0681No
41Il17rb54850.1950.0649No
42Opn355200.1930.0676No
43Tjp358160.1810.0568No
44Ptges59710.1730.0530No
45Add360240.1710.0542No
46Cbfa2t361850.1680.0499No
47Gla62200.1660.0520No
48Med2463710.1580.0480No
49Cant163720.1580.0515No
50Myb64040.1560.0535No
51Dlc165140.1510.0514No
52Krt865270.1500.0542No
53Asb1365690.1480.0555No
54Dynlt366620.1430.0540No
55Fkbp567540.1390.0526No
56Mlph68750.1340.0496No
57Olfml370300.1280.0447No
58Sec14l270740.1260.0454No
59Tob170810.1250.0479No
60Syngr171350.1230.0480No
61Slc22a572340.1180.0458No
62Tgm272590.1160.0472No
63Scarb173870.1110.0433No
64Xbp177090.0970.0293No
65Gab277650.0940.0287No
66Abca377920.0930.0295No
67Dhrs380820.0820.0168No
68Celsr181990.0770.0127No
69Rab3182260.0760.0131No
70Gfra183120.0720.0104No
71Greb184020.0680.0075No
72Snx2484780.0660.0052No
73Chpt184990.0650.0056No
74Slc2a186770.058-0.0020No
75Ar90460.043-0.0195No
76Anxa995380.023-0.0437No
77Slc19a296110.020-0.0469No
78Calb299180.006-0.0621No
79Nadsyn199510.005-0.0636No
80Sema3b101320.000-0.0727No
81Mpped210365-0.003-0.0843No
82Amfr10788-0.017-0.1052No
83Bcl210984-0.024-0.1145No
84Dhcr711009-0.025-0.1151No
85Slc7a511095-0.029-0.1187No
86Podxl11117-0.030-0.1191No
87Abat11207-0.033-0.1228No
88Pgr11314-0.038-0.1273No
89Sybu11757-0.056-0.1483No
90Elf111858-0.060-0.1520No
91Cd4412079-0.069-0.1615No
92Tmprss312144-0.073-0.1631No
93Fasn12250-0.077-0.1666No
94Tiparp12291-0.079-0.1669No
95Kazn12352-0.082-0.1680No
96Wwc112355-0.082-0.1663No
97Sh3bp512408-0.085-0.1670No
98Farp112554-0.091-0.1722No
99Arl313155-0.115-0.1998No
100Muc113305-0.122-0.2046No
101Tbc1d3013596-0.134-0.2162No
102Ppif13676-0.138-0.2170No
103Rrp1213756-0.141-0.2178No
104Gja113797-0.142-0.2166No
105Krt1813801-0.143-0.2135No
106Jak214148-0.158-0.2274No
107Ttc39a14153-0.158-0.2240No
108Rapgefl114439-0.170-0.2345No
109Sfn14719-0.184-0.2444No
110Rasgrp114813-0.188-0.2449No
111Blvrb15011-0.197-0.2503No
112Slc1a415455-0.219-0.2677No
113Tpd52l115502-0.221-0.2650No
114Tgif215604-0.226-0.2650No
115Reep115816-0.237-0.2703No
116Olfm115942-0.243-0.2711No
117Rhobtb315986-0.245-0.2677No
118Inpp5f16203-0.258-0.2728Yes
119Flnb16220-0.259-0.2678Yes
120Ccnd116221-0.259-0.2619Yes
121Slc16a116348-0.264-0.2623Yes
122Ugcg16610-0.277-0.2692Yes
123Akap116687-0.281-0.2667Yes
124Slc26a216702-0.283-0.2610Yes
125Rara16716-0.284-0.2553Yes
126Rab1716760-0.288-0.2509Yes
127Cish16800-0.290-0.2464Yes
128Sult2b116860-0.294-0.2427Yes
129Slc1a116914-0.298-0.2386Yes
130Klf1017033-0.305-0.2377Yes
131Plaat317175-0.315-0.2377Yes
132Nrip117330-0.325-0.2381Yes
133Slc39a617548-0.337-0.2414Yes
134Papss217578-0.339-0.2353Yes
135Cyp26b117924-0.368-0.2443Yes
136Car1217964-0.370-0.2379Yes
137Celsr217972-0.371-0.2299Yes
138Nxt118293-0.399-0.2370Yes
139Fdft118404-0.408-0.2334Yes
140Myc18603-0.431-0.2336Yes
141Isg20l218614-0.431-0.2244Yes
142P2ry218683-0.440-0.2179Yes
143Slc24a318706-0.443-0.2090Yes
144Mybbp1a18922-0.473-0.2091Yes
145Mast418985-0.483-0.2013Yes
146Lrig119029-0.490-0.1925Yes
147Fkbp419136-0.512-0.1863Yes
148Pmaip119200-0.524-0.1776Yes
149Igfbp419335-0.550-0.1719Yes
150Endod119336-0.551-0.1595Yes
151Scnn1a19348-0.554-0.1476Yes
152Bag119515-0.604-0.1423Yes
153Deptor19591-0.630-0.1319Yes
154Ablim119683-0.669-0.1213Yes
155Frk19905-0.812-0.1141Yes
156Thsd419990-0.961-0.0967Yes
157Il6st19995-0.977-0.0749Yes
158Slc7a220010-1.046-0.0520Yes
159Pex11a20016-1.116-0.0270Yes
160Stc220023-1.2190.0002Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_ESTROGEN_RESPONSE_EARLY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_ESTROGEN_RESPONSE_EARLY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_ESTROGEN_RESPONSE_EARLY