Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group3_versus_Group4.GMP.neu_Pheno.cls #Group3_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	-0.17704485
Normalized Enrichment Score (NES)	-0.7859867
Nominal p-value	0.88271606
FDR q-value	1.0
FWER p-Value	0.999

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tchh	69	0.916	0.0217	No
2	Rgs16	366	0.660	0.0250	No
3	H2ac25	396	0.646	0.0413	No
4	Tpd52l1	405	0.643	0.0586	No
5	Cd81	504	0.608	0.0703	No
6	Sdc1	558	0.594	0.0840	No
7	Abhd4	567	0.591	0.0999	No
8	Rrp8	570	0.590	0.1160	No
9	Ralgds	605	0.580	0.1302	No
10	Fas	622	0.577	0.1453	No
11	Ada	1271	0.466	0.1254	No
12	Pmm1	1791	0.413	0.1107	No
13	Klk8	1832	0.409	0.1199	No
14	Ctsd	2002	0.393	0.1222	No
15	Jag2	2113	0.380	0.1271	No
16	Ccnd2	2531	0.349	0.1157	No
17	Txnip	2672	0.339	0.1179	No
18	Fos	2798	0.330	0.1207	No
19	Rps12	3392	0.294	0.0989	No
20	Btg2	3450	0.292	0.1041	No
21	Nupr1	3569	0.284	0.1060	No
22	Coq8a	3690	0.275	0.1075	No
23	Xpc	3792	0.268	0.1098	No
24	Ldhb	3846	0.263	0.1143	No
25	Pvt1	3904	0.260	0.1186	No
26	Trib3	3953	0.257	0.1233	No
27	F2r	4254	0.242	0.1148	No
28	Wwp1	4318	0.237	0.1182	No
29	Vamp8	4553	0.228	0.1126	No
30	Stom	4576	0.227	0.1178	No
31	Def6	4674	0.223	0.1190	No
32	Vdr	4716	0.220	0.1230	No
33	Rxra	4798	0.215	0.1248	No
34	H1f2	5163	0.197	0.1119	No
35	Ankra2	5177	0.196	0.1167	No
36	Fuca1	5241	0.194	0.1188	No
37	Ier5	5307	0.190	0.1208	No
38	Klf4	5415	0.184	0.1205	No
39	Ddit4	5693	0.174	0.1113	No
40	App	5775	0.170	0.1119	No
41	Cdh13	5869	0.166	0.1118	No
42	Ip6k2	6174	0.152	0.1006	No
43	Ifi30	6187	0.151	0.1042	No
44	Cyfip2	6497	0.137	0.0924	No
45	Zbtb16	6689	0.128	0.0863	No
46	Socs1	6786	0.124	0.0849	No
47	Cd82	6812	0.123	0.0870	No
48	Rap2b	6882	0.121	0.0868	No
49	Rack1	7193	0.115	0.0744	No
50	Tm7sf3	7400	0.107	0.0670	No
51	Ccng1	7402	0.107	0.0699	No
52	Hras	7432	0.106	0.0713	No
53	Mknk2	7492	0.103	0.0712	No
54	Rnf19b	7547	0.101	0.0712	No
55	Nudt15	7673	0.097	0.0676	No
56	Prmt2	7760	0.093	0.0658	No
57	Irak1	7812	0.091	0.0658	No
58	Ppp1r15a	7835	0.090	0.0671	No
59	Tap1	7843	0.089	0.0692	No
60	Osgin1	7935	0.086	0.0670	No
61	Perp	8345	0.070	0.0483	No
62	Abcc5	8509	0.063	0.0419	No
63	Dcxr	8560	0.061	0.0410	No
64	Tprkb	8656	0.057	0.0378	No
65	Tax1bp3	8730	0.054	0.0356	No
66	Itgb4	8769	0.053	0.0351	No
67	Jun	8945	0.046	0.0276	No
68	Fam162a	8957	0.046	0.0283	No
69	Hspa4l	8982	0.045	0.0283	No
70	Traf4	9018	0.043	0.0277	No
71	Pdgfa	9089	0.040	0.0253	No
72	Steap3	9164	0.037	0.0226	No
73	S100a4	9208	0.036	0.0214	No
74	Fdxr	9339	0.032	0.0158	No
75	Blcap	9371	0.031	0.0151	No
76	Bak1	9388	0.030	0.0151	No
77	Zmat3	9390	0.030	0.0159	No
78	Fbxw7	9513	0.026	0.0104	No
79	Sp1	9697	0.019	0.0017	No
80	Tob1	9803	0.015	-0.0031	No
81	Ppm1d	9839	0.014	-0.0045	No
82	Mxd4	9924	0.012	-0.0084	No
83	Baiap2	9988	0.010	-0.0113	No
84	Ccp110	10091	0.006	-0.0163	No
85	Ei24	10166	0.003	-0.0200	No
86	Alox8	10262	0.000	-0.0248	No
87	Dgka	10590	-0.005	-0.0411	No
88	Pitpnc1	10788	-0.012	-0.0507	No
89	Vwa5a	10958	-0.018	-0.0587	No
90	Rchy1	11006	-0.019	-0.0606	No
91	Foxo3	11016	-0.020	-0.0605	No
92	Tgfb1	11199	-0.025	-0.0690	No
93	Retsat	11286	-0.029	-0.0725	No
94	Mdm2	11295	-0.029	-0.0721	No
95	Irag2	11422	-0.034	-0.0775	No
96	Ptpre	11477	-0.035	-0.0793	No
97	Rps27l	11548	-0.038	-0.0818	No
98	Zfp36l1	11557	-0.038	-0.0811	No
99	Rab40c	11560	-0.038	-0.0802	No
100	Trafd1	11775	-0.046	-0.0897	No
101	Slc7a11	11934	-0.051	-0.0962	No
102	Triap1	11978	-0.053	-0.0969	No
103	Pcna	12050	-0.054	-0.0990	No
104	Bax	12054	-0.054	-0.0977	No
105	Rrad	12059	-0.054	-0.0964	No
106	Apaf1	12087	-0.055	-0.0963	No
107	Mapkapk3	12090	-0.055	-0.0948	No
108	Ninj1	12328	-0.064	-0.1050	No
109	Notch1	12345	-0.064	-0.1041	No
110	Slc3a2	12394	-0.066	-0.1047	No
111	Slc35d1	12396	-0.066	-0.1029	No
112	Hexim1	12545	-0.072	-0.1084	No
113	Tsc22d1	12595	-0.073	-0.1088	No
114	Rhbdf2	12660	-0.076	-0.1100	No
115	Hbegf	12734	-0.079	-0.1115	No
116	Cdkn2aip	12750	-0.079	-0.1100	No
117	Hdac3	12783	-0.081	-0.1094	No
118	Dnttip2	12850	-0.083	-0.1105	No
119	Pidd1	12889	-0.085	-0.1101	No
120	Rb1	13093	-0.091	-0.1178	No
121	Prkab1	13117	-0.092	-0.1164	No
122	Abat	13139	-0.093	-0.1149	No
123	Sfn	13237	-0.096	-0.1171	No
124	Polh	13564	-0.108	-0.1306	No
125	St14	13582	-0.109	-0.1285	No
126	Elp1	13642	-0.111	-0.1284	No
127	Ercc5	13803	-0.118	-0.1332	No
128	Ptpn14	13868	-0.119	-0.1332	No
129	Trp53	13969	-0.123	-0.1348	No
130	Rad51c	14061	-0.128	-0.1359	No
131	Hint1	14176	-0.132	-0.1380	No
132	Gm2a	14194	-0.133	-0.1352	No
133	Cdk5r1	14375	-0.140	-0.1404	No
134	Ddit3	14640	-0.151	-0.1495	No
135	Kif13b	15187	-0.174	-0.1723	Yes
136	Ier3	15206	-0.175	-0.1684	Yes
137	Rpl36	15207	-0.175	-0.1636	Yes
138	Cgrrf1	15254	-0.178	-0.1610	Yes
139	Ccnk	15451	-0.182	-0.1659	Yes
140	Ddb2	15475	-0.183	-0.1620	Yes
141	Csrnp2	15519	-0.185	-0.1591	Yes
142	Cebpa	15628	-0.190	-0.1593	Yes
143	Ndrg1	15680	-0.192	-0.1566	Yes
144	Aen	15792	-0.198	-0.1567	Yes
145	Rad9a	15799	-0.199	-0.1515	Yes
146	Ccnd3	15939	-0.206	-0.1529	Yes
147	Sertad3	15966	-0.207	-0.1485	Yes
148	Nol8	15982	-0.208	-0.1435	Yes
149	Mxd1	16146	-0.213	-0.1459	Yes
150	Pom121	16166	-0.215	-0.1409	Yes
151	Ctsf	16175	-0.215	-0.1354	Yes
152	Sec61a1	16624	-0.240	-0.1514	Yes
153	Gadd45a	16675	-0.243	-0.1473	Yes
154	Sesn1	16691	-0.244	-0.1413	Yes
155	Plxnb2	16744	-0.247	-0.1371	Yes
156	Trp63	16913	-0.257	-0.1385	Yes
157	Casp1	16957	-0.260	-0.1335	Yes
158	Tspyl2	17130	-0.269	-0.1348	Yes
159	Tcn2	17390	-0.281	-0.1401	Yes
160	Rpl18	17430	-0.284	-0.1343	Yes
161	S100a10	17474	-0.288	-0.1285	Yes
162	Ak1	17533	-0.292	-0.1234	Yes
163	Tnfsf9	17541	-0.292	-0.1157	Yes
164	Sat1	17793	-0.310	-0.1198	Yes
165	Eps8l2	17952	-0.320	-0.1190	Yes
166	Hmox1	18169	-0.335	-0.1207	Yes
167	Plk2	18209	-0.337	-0.1134	Yes
168	H2aj	18236	-0.339	-0.1053	Yes
169	Wrap73	18376	-0.350	-0.1027	Yes
170	Dram1	18553	-0.368	-0.1014	Yes
171	Slc19a2	18578	-0.371	-0.0924	Yes
172	Acvr1b	18790	-0.397	-0.0921	Yes
173	Sphk1	18909	-0.411	-0.0868	Yes
174	Iscu	18949	-0.417	-0.0773	Yes
175	Atf3	19027	-0.424	-0.0695	Yes
176	Fgf13	19053	-0.428	-0.0590	Yes
177	Tgfa	19158	-0.441	-0.0521	Yes
178	Plk3	19312	-0.468	-0.0469	Yes
179	Cdkn1a	19498	-0.508	-0.0423	Yes
180	Procr	19642	-0.550	-0.0344	Yes
181	Btg1	19684	-0.564	-0.0209	Yes
182	Ephx1	19750	-0.587	-0.0080	Yes
183	Gls2	19971	-0.796	0.0028	Yes