| Dataset | GMP.GMP.neu_Pheno.cls #Group3_versus_Group4.GMP.neu_Pheno.cls #Group3_versus_Group4_repos |
| Phenotype | GMP.neu_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_KRAS_SIGNALING_UP |
| Enrichment Score (ES) | 0.24733655 |
| Normalized Enrichment Score (NES) | 1.1644199 |
| Nominal p-value | 0.13060428 |
| FDR q-value | 0.7994667 |
| FWER p-Value | 0.921 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Clec4a3 | 36 | 1.005 | 0.0260 | Yes |
| 2 | Tnfaip3 | 67 | 0.917 | 0.0499 | Yes |
| 3 | Tmem158 | 84 | 0.890 | 0.0737 | Yes |
| 4 | Cmklr1 | 94 | 0.855 | 0.0969 | Yes |
| 5 | Rgs16 | 366 | 0.660 | 0.1016 | Yes |
| 6 | Ets1 | 455 | 0.624 | 0.1144 | Yes |
| 7 | Il7r | 503 | 0.608 | 0.1289 | Yes |
| 8 | F2rl1 | 536 | 0.598 | 0.1438 | Yes |
| 9 | Etv1 | 586 | 0.586 | 0.1576 | Yes |
| 10 | Hdac9 | 655 | 0.567 | 0.1699 | Yes |
| 11 | Il1rl2 | 700 | 0.559 | 0.1831 | Yes |
| 12 | Slpi | 918 | 0.518 | 0.1866 | Yes |
| 13 | Mafb | 1110 | 0.488 | 0.1905 | Yes |
| 14 | Itgb2 | 1406 | 0.451 | 0.1881 | Yes |
| 15 | Etv4 | 1658 | 0.428 | 0.1873 | Yes |
| 16 | Id2 | 1794 | 0.413 | 0.1919 | Yes |
| 17 | Mycn | 1845 | 0.407 | 0.2007 | Yes |
| 18 | Pdcd1lg2 | 1954 | 0.397 | 0.2062 | Yes |
| 19 | Yrdc | 1973 | 0.396 | 0.2163 | Yes |
| 20 | Plau | 2066 | 0.386 | 0.2224 | Yes |
| 21 | Traf1 | 2188 | 0.373 | 0.2266 | Yes |
| 22 | Reln | 2391 | 0.359 | 0.2264 | Yes |
| 23 | Ccnd2 | 2531 | 0.349 | 0.2290 | Yes |
| 24 | G0s2 | 2758 | 0.334 | 0.2269 | Yes |
| 25 | Dcbld2 | 2789 | 0.331 | 0.2345 | Yes |
| 26 | Flt4 | 2828 | 0.327 | 0.2417 | Yes |
| 27 | Glrx | 2893 | 0.321 | 0.2473 | Yes |
| 28 | Cfb | 3342 | 0.297 | 0.2330 | No |
| 29 | Scg3 | 3395 | 0.293 | 0.2385 | No |
| 30 | Gfpt2 | 3402 | 0.293 | 0.2463 | No |
| 31 | Ptcd2 | 3925 | 0.259 | 0.2272 | No |
| 32 | Il2rg | 3926 | 0.259 | 0.2344 | No |
| 33 | Avl9 | 3935 | 0.258 | 0.2412 | No |
| 34 | Hsd11b1 | 3970 | 0.256 | 0.2465 | No |
| 35 | Ly96 | 4149 | 0.248 | 0.2444 | No |
| 36 | Sema3b | 4483 | 0.229 | 0.2340 | No |
| 37 | Dnmbp | 5147 | 0.198 | 0.2061 | No |
| 38 | Dusp6 | 5174 | 0.196 | 0.2103 | No |
| 39 | Fuca1 | 5241 | 0.194 | 0.2123 | No |
| 40 | Zfp639 | 5265 | 0.193 | 0.2165 | No |
| 41 | Angptl4 | 5270 | 0.192 | 0.2216 | No |
| 42 | Klf4 | 5415 | 0.184 | 0.2195 | No |
| 43 | Ppbp | 5424 | 0.184 | 0.2242 | No |
| 44 | H2bc3 | 5572 | 0.181 | 0.2218 | No |
| 45 | Cbl | 6097 | 0.156 | 0.1997 | No |
| 46 | Lat2 | 6271 | 0.147 | 0.1951 | No |
| 47 | Cbx8 | 6321 | 0.144 | 0.1966 | No |
| 48 | Gadd45g | 6406 | 0.142 | 0.1963 | No |
| 49 | Map7 | 6478 | 0.138 | 0.1966 | No |
| 50 | Adgrl4 | 6495 | 0.137 | 0.1996 | No |
| 51 | Akt2 | 6599 | 0.132 | 0.1981 | No |
| 52 | Plaur | 6651 | 0.129 | 0.1991 | No |
| 53 | Csf2ra | 6715 | 0.127 | 0.1994 | No |
| 54 | Tlr8 | 6971 | 0.119 | 0.1899 | No |
| 55 | Gprc5b | 7300 | 0.110 | 0.1764 | No |
| 56 | Nr0b2 | 7329 | 0.109 | 0.1780 | No |
| 57 | Tmem176b | 7481 | 0.103 | 0.1733 | No |
| 58 | Gypc | 7678 | 0.097 | 0.1661 | No |
| 59 | Kcnn4 | 7723 | 0.094 | 0.1665 | No |
| 60 | F13a1 | 7781 | 0.092 | 0.1662 | No |
| 61 | Tnfrsf1b | 7814 | 0.091 | 0.1671 | No |
| 62 | Ppp1r15a | 7835 | 0.090 | 0.1686 | No |
| 63 | Scg5 | 7914 | 0.087 | 0.1670 | No |
| 64 | Cfh | 8128 | 0.078 | 0.1585 | No |
| 65 | Ammecr1 | 8207 | 0.076 | 0.1566 | No |
| 66 | Lcp1 | 8284 | 0.072 | 0.1548 | No |
| 67 | Bpgm | 8303 | 0.072 | 0.1559 | No |
| 68 | Ank | 8533 | 0.062 | 0.1461 | No |
| 69 | Mtmr10 | 8583 | 0.060 | 0.1453 | No |
| 70 | Gucy1a1 | 8630 | 0.058 | 0.1446 | No |
| 71 | Car2 | 8747 | 0.054 | 0.1402 | No |
| 72 | Birc3 | 8751 | 0.053 | 0.1416 | No |
| 73 | Tspan13 | 9076 | 0.041 | 0.1264 | No |
| 74 | Irf8 | 9315 | 0.033 | 0.1153 | No |
| 75 | Eng | 9496 | 0.027 | 0.1070 | No |
| 76 | Atg10 | 9570 | 0.024 | 0.1040 | No |
| 77 | Map3k1 | 9581 | 0.023 | 0.1041 | No |
| 78 | Ptprr | 9640 | 0.021 | 0.1018 | No |
| 79 | Etv5 | 9746 | 0.018 | 0.0970 | No |
| 80 | Nin | 9802 | 0.016 | 0.0947 | No |
| 81 | Akap12 | 9879 | 0.013 | 0.0912 | No |
| 82 | Kif5c | 10274 | 0.000 | 0.0714 | No |
| 83 | Satb1 | 10583 | -0.005 | 0.0560 | No |
| 84 | Ero1a | 10594 | -0.005 | 0.0557 | No |
| 85 | Mmd | 10690 | -0.008 | 0.0511 | No |
| 86 | Cd37 | 10707 | -0.009 | 0.0505 | No |
| 87 | Itgbl1 | 10948 | -0.017 | 0.0389 | No |
| 88 | Vwa5a | 10958 | -0.018 | 0.0390 | No |
| 89 | Inhba | 11184 | -0.025 | 0.0283 | No |
| 90 | Tmem176a | 11283 | -0.029 | 0.0242 | No |
| 91 | Cbr4 | 11397 | -0.033 | 0.0194 | No |
| 92 | Wnt7a | 11425 | -0.034 | 0.0190 | No |
| 93 | Adgra2 | 11696 | -0.043 | 0.0066 | No |
| 94 | Trib1 | 11702 | -0.043 | 0.0076 | No |
| 95 | Rbm4 | 11719 | -0.044 | 0.0080 | No |
| 96 | Tspan7 | 11856 | -0.049 | 0.0025 | No |
| 97 | Evi5 | 11876 | -0.049 | 0.0029 | No |
| 98 | Rabgap1l | 11966 | -0.052 | -0.0002 | No |
| 99 | Ikzf1 | 12570 | -0.073 | -0.0285 | No |
| 100 | Hbegf | 12734 | -0.079 | -0.0345 | No |
| 101 | Btc | 12804 | -0.081 | -0.0357 | No |
| 102 | Psmb8 | 13074 | -0.090 | -0.0468 | No |
| 103 | Dock2 | 13226 | -0.096 | -0.0517 | No |
| 104 | Sdccag8 | 13523 | -0.107 | -0.0636 | No |
| 105 | Crot | 13736 | -0.115 | -0.0711 | No |
| 106 | Wdr33 | 13836 | -0.118 | -0.0728 | No |
| 107 | Cab39l | 13839 | -0.118 | -0.0697 | No |
| 108 | Cdadc1 | 13861 | -0.119 | -0.0674 | No |
| 109 | Laptm5 | 13939 | -0.122 | -0.0679 | No |
| 110 | Gpnmb | 14341 | -0.139 | -0.0842 | No |
| 111 | Prelid3b | 14792 | -0.157 | -0.1025 | No |
| 112 | Zfp277 | 14870 | -0.161 | -0.1020 | No |
| 113 | Pecam1 | 14931 | -0.164 | -0.1005 | No |
| 114 | Cxcr4 | 14994 | -0.167 | -0.0990 | No |
| 115 | Mmp11 | 15086 | -0.170 | -0.0988 | No |
| 116 | Fbxo4 | 15182 | -0.173 | -0.0988 | No |
| 117 | Adam17 | 15229 | -0.176 | -0.0962 | No |
| 118 | Strn | 15243 | -0.177 | -0.0920 | No |
| 119 | Fcer1g | 15630 | -0.190 | -0.1062 | No |
| 120 | Nrp1 | 15714 | -0.194 | -0.1050 | No |
| 121 | Ccser2 | 15919 | -0.204 | -0.1096 | No |
| 122 | Spon1 | 16122 | -0.212 | -0.1139 | No |
| 123 | Plvap | 16131 | -0.212 | -0.1084 | No |
| 124 | Arg1 | 16160 | -0.215 | -0.1039 | No |
| 125 | Abcb1a | 16618 | -0.239 | -0.1202 | No |
| 126 | Trib2 | 16725 | -0.246 | -0.1188 | No |
| 127 | Il10ra | 16755 | -0.247 | -0.1134 | No |
| 128 | St6gal1 | 16835 | -0.252 | -0.1104 | No |
| 129 | Map4k1 | 16907 | -0.257 | -0.1069 | No |
| 130 | Ptbp2 | 16915 | -0.257 | -0.1001 | No |
| 131 | Scn1b | 17189 | -0.272 | -0.1063 | No |
| 132 | Hkdc1 | 17191 | -0.272 | -0.0988 | No |
| 133 | Usp12 | 17286 | -0.277 | -0.0959 | No |
| 134 | Cpe | 17335 | -0.279 | -0.0906 | No |
| 135 | Gng11 | 17398 | -0.282 | -0.0859 | No |
| 136 | Tor1aip2 | 17471 | -0.287 | -0.0816 | No |
| 137 | Tfpi | 17587 | -0.295 | -0.0792 | No |
| 138 | Adam8 | 17744 | -0.307 | -0.0786 | No |
| 139 | Cxcl10 | 17887 | -0.316 | -0.0770 | No |
| 140 | Itga2 | 17984 | -0.321 | -0.0729 | No |
| 141 | Prdm1 | 18227 | -0.338 | -0.0757 | No |
| 142 | Epb41l3 | 18364 | -0.349 | -0.0729 | No |
| 143 | Galnt3 | 18638 | -0.377 | -0.0762 | No |
| 144 | Nr1h4 | 18882 | -0.408 | -0.0771 | No |
| 145 | Ctss | 18920 | -0.413 | -0.0675 | No |
| 146 | Spry2 | 18963 | -0.418 | -0.0581 | No |
| 147 | Aldh1a3 | 18976 | -0.419 | -0.0471 | No |
| 148 | Btbd3 | 19396 | -0.483 | -0.0548 | No |
| 149 | Ephb2 | 19468 | -0.501 | -0.0445 | No |
| 150 | Ano1 | 19469 | -0.501 | -0.0306 | No |
| 151 | Spp1 | 19486 | -0.505 | -0.0174 | No |
| 152 | Plek2 | 19500 | -0.508 | -0.0040 | No |
| 153 | Jup | 19606 | -0.540 | 0.0056 | No |
| 154 | Ptgs2 | 19663 | -0.558 | 0.0183 | No |

