DatasetGMP.GMP.neu_Pheno.cls
#Group3_versus_Group4.GMP.neu_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_KRAS_SIGNALING_DN
Enrichment Score (ES)0.25453606
Normalized Enrichment Score (NES)1.0468917
Nominal p-value0.33333334
FDR q-value0.70474946
FWER p-Value0.974
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_KRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Zfp1122010.7460.0151Yes
2Gtf3c52700.6980.0352Yes
3Cpeb32820.6940.0581Yes
4Camk1d3370.6730.0781Yes
5Sidt13570.6630.0995Yes
6Cacna1f3760.6550.1207Yes
7Prodh4630.6220.1374Yes
8Dcc7100.5570.1439Yes
9Nr4a28210.5370.1565Yes
10Kcnn19500.5110.1673Yes
11Nr6a112910.4620.1658Yes
12Epha513860.4530.1764Yes
13Selenop14930.4400.1859Yes
14Klk818320.4090.1828Yes
15Atp4a21980.3720.1770Yes
16Grid222670.3690.1860Yes
17Ryr223320.3610.1950Yes
18Tcf7l125640.3460.1951Yes
19Itgb1bp226460.3410.2025Yes
20Kcnd126580.3400.2135Yes
21Tgfb228100.3290.2170Yes
22Hsd11b229400.3190.2213Yes
23Abcb1131950.3050.2188Yes
24Hnf1a31970.3050.2290Yes
25Serpinb233820.2940.2297Yes
26Btg234500.2920.2362Yes
27P2rx634880.2890.2441Yes
28Mfsd636000.2820.2481Yes
29Coq8a36900.2750.2529Yes
30Ybx240670.2500.2425Yes
31Nos141530.2480.2466Yes
32Arpp2142260.2440.2512Yes
33Gpr1944500.2290.2477Yes
34Hc44690.2290.2545Yes
35Ccdc10647460.2190.2481No
36Fggy47760.2160.2539No
37Efhd149410.2070.2527No
38Sphk251860.1960.2470No
39Entpd752150.1950.2522No
40Sgk158480.1670.2261No
41Prkn59520.1630.2264No
42Tshb64500.1400.2062No
43Tgm166160.1320.2024No
44Zbtb1666890.1280.2031No
45Ptprj68620.1220.1985No
46Skil69150.1190.1999No
47Idua72670.1120.1861No
48Kcnmb173630.1080.1850No
49Rgs1173640.1080.1886No
50Thrb78970.0880.1648No
51Abcg481040.0790.1572No
52Bard183150.0710.1490No
53Tnni384120.0670.1465No
54Clstn386160.0590.1382No
55Mefv92940.0340.1054No
56Slc25a2393340.0320.1045No
57Macroh2a297190.0180.0859No
58Kmt2d98740.0130.0786No
59Cdkal199430.0110.0755No
60Zc2hc1c101530.0030.0651No
61Cyp39a1101950.0020.0631No
62Ngb102630.0000.0598No
63Mast310479-0.0020.0490No
64Ypel110739-0.0100.0364No
65Tg10868-0.0150.0304No
66Copz211179-0.0250.0157No
67Cd8011530-0.037-0.0006No
68Egf11559-0.038-0.0007No
69Arhgdig11763-0.045-0.0094No
70Msh512082-0.055-0.0235No
71Htr1d12084-0.055-0.0217No
72Asb712110-0.056-0.0210No
73Tfcp2l112146-0.058-0.0209No
74Dtnb12596-0.074-0.0409No
75Snn12764-0.080-0.0466No
76Mthfr13183-0.095-0.0644No
77Edar13354-0.100-0.0696No
78Gp1ba13952-0.123-0.0954No
79Tent5c14134-0.131-0.1000No
80Brdt15138-0.171-0.1446No
81Plag115209-0.175-0.1423No
82Pdk215304-0.180-0.1409No
83Slc16a715341-0.182-0.1366No
84Synpo15488-0.184-0.1377No
85Gamt15555-0.186-0.1347No
86Vps5015671-0.192-0.1340No
87Slc29a315847-0.201-0.1360No
88Myo15a15958-0.206-0.1346No
89Stag316218-0.217-0.1403No
90Slc5a517061-0.267-0.1735No
91Slc12a317199-0.272-0.1712No
92Capn917260-0.274-0.1650No
93Pde6b17576-0.295-0.1708No
94Tex1517713-0.305-0.1674No
95Slc6a317865-0.316-0.1643No
96Celsr218008-0.324-0.1605No
97Fgf2218028-0.326-0.1505No
98Nrip218222-0.338-0.1487No
99Lfng18441-0.357-0.1476No
100Bmpr1b19130-0.438-0.1674No
101Cpa219213-0.451-0.1563No
102Magix19415-0.488-0.1499No
103Serpina1019420-0.488-0.1337No
104Tenm219455-0.498-0.1186No
105Thnsl219556-0.521-0.1060No
106Ryr119571-0.526-0.0889No
107Sptbn219915-0.707-0.0823No
108Rsad219939-0.732-0.0587No
109Mx220025-1.8690.0001No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_KRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_KRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for HALLMARK_KRAS_SIGNALING_DN