DatasetGMP.GMP.neu_Pheno.cls
#Group3_versus_Group4.GMP.neu_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.48290038
Normalized Enrichment Score (NES)-1.6087812
Nominal p-value0.035785288
FDR q-value0.23611405
FWER p-Value0.238
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Isg1501.6870.0638No
2Lpar616550.428-0.0030No
3Ccrl220590.387-0.0085No
4Batf224870.353-0.0166No
5Txnip26720.339-0.0130No
6Irf127360.336-0.0035No
7Cd7432860.302-0.0196No
8Ifi3537560.271-0.0329No
9Psme247500.218-0.0745No
10Il752880.192-0.0942No
11Ifit354540.184-0.0955No
12Ifi3061870.151-0.1265No
13Il4ra71910.115-0.1724No
14Stat275910.100-0.1887No
15Isg2076670.097-0.1887No
16Tap178430.089-0.1941No
17B2m78790.088-0.1926No
18Cnp92460.035-0.2597No
19Cd4795030.027-0.2716No
20Trim26102160.001-0.3072No
21Ncoa710534-0.003-0.3230No
22Sell10815-0.013-0.3366No
23Adar10860-0.015-0.3382No
24Casp811190-0.025-0.3538No
25Slc25a2811418-0.034-0.3639No
26Irf911539-0.038-0.3685No
27Trafd111775-0.046-0.3785No
28Plscr112492-0.070-0.4118No
29Cmpk212611-0.074-0.4149No
30Elf112686-0.077-0.4157No
31Psma312709-0.078-0.4139No
32Irf212739-0.079-0.4124No
33Ripk212775-0.080-0.4111No
34Nub112796-0.081-0.4090No
35Pnpt112857-0.083-0.4089No
36Psmb813074-0.090-0.4163No
37Tmem14013535-0.107-0.4353No
38Uba713680-0.112-0.4383No
39Cmtr113757-0.116-0.4377No
40Ifi4413811-0.118-0.4359No
41Gmpr14319-0.139-0.4561No
42Wars114346-0.140-0.4522No
43Ube2l614447-0.143-0.4518No
44Ly6e14575-0.148-0.4525No
45Bst214899-0.162-0.4626No
46Rnf3115068-0.169-0.4646No
47Eif2ak215121-0.171-0.4608No
48Ifit215153-0.172-0.4559No
49Ifi2715217-0.175-0.4524No
50Samd9l15531-0.185-0.4611No
51Trim1415940-0.206-0.4738No
52Ifitm116123-0.212-0.4749Yes
53Psme116258-0.219-0.4733Yes
54Gbp316261-0.219-0.4652Yes
55Sp11016421-0.229-0.4645Yes
56Psmb916438-0.229-0.4566Yes
57Tent5a16456-0.230-0.4488Yes
58Irf716495-0.232-0.4419Yes
59Parp916694-0.244-0.4426Yes
60Mvb12a16859-0.253-0.4413Yes
61Casp116957-0.260-0.4363Yes
62Usp1817237-0.273-0.4400Yes
63Rtp417257-0.274-0.4306Yes
64Trim2117396-0.282-0.4269Yes
65Ifitm217843-0.314-0.4374Yes
66Cxcl1017887-0.316-0.4276Yes
67Oas1a18095-0.330-0.4255Yes
68Epsti118244-0.339-0.4201Yes
69Ogfr18498-0.364-0.4190Yes
70Dhx5818651-0.378-0.4123Yes
71Lgals3bp18744-0.392-0.4021Yes
72Helz218824-0.402-0.3909Yes
73Lap318857-0.406-0.3772Yes
74Trim2518924-0.414-0.3649Yes
75Nmi18934-0.415-0.3496Yes
76Trim12c18936-0.415-0.3340Yes
77Parp1419231-0.455-0.3315Yes
78Il1519280-0.461-0.3165Yes
79Herc619365-0.477-0.3027Yes
80Procr19642-0.550-0.2958Yes
81Tdrd719648-0.551-0.2752Yes
82Ifih119688-0.566-0.2558Yes
83Oasl119774-0.600-0.2374Yes
84Ddx6019816-0.628-0.2157Yes
85Mov1019937-0.729-0.1941Yes
86Rsad219939-0.732-0.1665Yes
87Parp1219984-0.828-0.1374Yes
88Csf120004-0.905-0.1042Yes
89Ifitm320006-0.913-0.0697Yes
90Mx220025-1.8690.0001Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE