Details for gene set HALLMARK_CHOLESTEROL

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group3_versus_Group4.GMP.neu_Pheno.cls #Group3_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_CHOLESTEROL_HOMEOSTASIS
Enrichment Score (ES)	0.4559038
Normalized Enrichment Score (NES)	1.6339138
Nominal p-value	0.0020283975
FDR q-value	0.41307592
FWER p-Value	0.203

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tnfrsf12a	16	1.064	0.0523	Yes
2	Lss	37	1.000	0.1011	Yes
3	Cyp51	98	0.852	0.1406	Yes
4	Stard4	119	0.814	0.1802	Yes
5	Pmvk	131	0.802	0.2196	Yes
6	Sqle	324	0.680	0.2439	Yes
7	Hmgcr	370	0.658	0.2745	Yes
8	Fbxo6	462	0.623	0.3010	Yes
9	Ldlr	547	0.595	0.3265	Yes
10	Lpl	590	0.585	0.3535	Yes
11	Sc5d	1101	0.488	0.3523	Yes
12	Nsdhl	1243	0.471	0.3688	Yes
13	Idi1	1302	0.461	0.3889	Yes
14	Srebf2	1514	0.438	0.4001	Yes
15	Gldc	1885	0.402	0.4017	Yes
16	Lgals3	2163	0.374	0.4064	Yes
17	Fdps	2284	0.367	0.4187	Yes
18	Jag1	2501	0.352	0.4254	Yes
19	S100a11	2562	0.346	0.4397	Yes
20	Hsd17b7	2839	0.325	0.4421	Yes
21	Mvd	3125	0.310	0.4433	Yes
22	Abca2	3178	0.306	0.4559	Yes
23	Trib3	3953	0.257	0.4299	No
24	Tm7sf2	4018	0.252	0.4393	No
25	Sema3b	4483	0.229	0.4275	No
26	Cd9	5015	0.204	0.4110	No
27	Pcyt2	6185	0.151	0.3600	No
28	Alcam	6344	0.143	0.3593	No
29	Anxa5	6441	0.140	0.3614	No
30	Nfil3	6459	0.139	0.3675	No
31	Pparg	6584	0.133	0.3679	No
32	Plaur	6651	0.129	0.3711	No
33	Mvk	6878	0.121	0.3658	No
34	Aldoc	7695	0.095	0.3296	No
35	Ethe1	7817	0.091	0.3281	No
36	Atxn2	8030	0.082	0.3216	No
37	Gstm7	8387	0.068	0.3072	No
38	Pnrc1	8551	0.061	0.3021	No
39	Atf5	9619	0.022	0.2497	No
40	Chka	9916	0.012	0.2355	No
41	Fasn	9971	0.010	0.2333	No
42	Fads2	10118	0.005	0.2262	No
43	Gnai1	10321	0.000	0.2161	No
44	Errfi1	11371	-0.032	0.1651	No
45	Ech1	12209	-0.060	0.1262	No
46	Ebp	12395	-0.066	0.1202	No
47	Plscr1	12492	-0.070	0.1189	No
48	Fdft1	12840	-0.082	0.1056	No
49	Cpeb2	12955	-0.087	0.1042	No
50	Gusb	13568	-0.108	0.0789	No
51	Hmgcs1	14218	-0.134	0.0531	No
52	Pdk3	15231	-0.176	0.0112	No
53	Lgmn	15844	-0.201	-0.0094	No
54	Ctnnb1	16330	-0.223	-0.0226	No
55	Acat2	16656	-0.242	-0.0268	No
56	Actg1	16826	-0.251	-0.0228	No
57	Niban1	17010	-0.263	-0.0188	No
58	Dhcr7	17313	-0.277	-0.0201	No
59	Stx5a	17449	-0.285	-0.0126	No
60	Clu	18128	-0.333	-0.0300	No
61	Fabp5	18360	-0.349	-0.0242	No
62	Antxr2	18452	-0.358	-0.0109	No
63	Tmem97	18582	-0.371	0.0012	No
64	Acss2	18862	-0.406	0.0075	No
65	Atf3	19027	-0.424	0.0204	No
66	Trp53inp1	19761	-0.594	0.0133	No