Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | GMP.GMP.neu_Pheno.cls #Group2_versus_Group4.GMP.neu_Pheno.cls #Group2_versus_Group4_repos |
| Phenotype | GMP.neu_Pheno.cls#Group2_versus_Group4_repos |
| Upregulated in class | 1 |
| GeneSet | HALLMARK_TGF_BETA_SIGNALING |
| Enrichment Score (ES) | 0.25992477 |
| Normalized Enrichment Score (NES) | 1.118119 |
| Nominal p-value | 0.28242677 |
| FDR q-value | 0.6026768 |
| FWER p-Value | 0.933 |
| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Rhoa | 1128 | 0.492 | -0.0101 | Yes |
| 2 | Cdkn1c | 1224 | 0.479 | 0.0303 | Yes |
| 3 | Smad7 | 1246 | 0.476 | 0.0740 | Yes |
| 4 | Ppm1a | 1868 | 0.414 | 0.0819 | Yes |
| 5 | Id1 | 2018 | 0.400 | 0.1122 | Yes |
| 6 | Ski | 2347 | 0.375 | 0.1311 | Yes |
| 7 | Acvr1 | 2452 | 0.369 | 0.1606 | Yes |
| 8 | Bmpr1a | 2554 | 0.359 | 0.1894 | Yes |
| 9 | Sptbn1 | 2859 | 0.340 | 0.2062 | Yes |
| 10 | Id2 | 2952 | 0.334 | 0.2331 | Yes |
| 11 | Ctnnb1 | 3104 | 0.323 | 0.2560 | Yes |
| 12 | Wwtr1 | 3881 | 0.278 | 0.2434 | Yes |
| 13 | Ltbp2 | 4056 | 0.268 | 0.2599 | Yes |
| 14 | Rab31 | 5391 | 0.197 | 0.2117 | No |
| 15 | Ifngr2 | 5844 | 0.178 | 0.2058 | No |
| 16 | Ube2d3 | 6542 | 0.148 | 0.1848 | No |
| 17 | Furin | 6598 | 0.145 | 0.1957 | No |
| 18 | Smad1 | 6858 | 0.130 | 0.1949 | No |
| 19 | Fnta | 7376 | 0.108 | 0.1793 | No |
| 20 | Skil | 7629 | 0.097 | 0.1758 | No |
| 21 | Klf10 | 7831 | 0.091 | 0.1743 | No |
| 22 | Tjp1 | 8147 | 0.077 | 0.1658 | No |
| 23 | Fkbp1a | 8289 | 0.070 | 0.1654 | No |
| 24 | Bcar3 | 8744 | 0.051 | 0.1475 | No |
| 25 | Ppp1ca | 8775 | 0.050 | 0.1507 | No |
| 26 | Xiap | 9225 | 0.031 | 0.1311 | No |
| 27 | Trim33 | 9496 | 0.018 | 0.1193 | No |
| 28 | Smurf2 | 9503 | 0.018 | 0.1206 | No |
| 29 | Cdk9 | 9705 | 0.008 | 0.1113 | No |
| 30 | Junb | 10650 | -0.029 | 0.0669 | No |
| 31 | Apc | 10730 | -0.032 | 0.0659 | No |
| 32 | Cdh1 | 11125 | -0.048 | 0.0507 | No |
| 33 | Smad3 | 11443 | -0.064 | 0.0409 | No |
| 34 | Slc20a1 | 11729 | -0.077 | 0.0338 | No |
| 35 | Map3k7 | 11915 | -0.087 | 0.0327 | No |
| 36 | Ncor2 | 12447 | -0.110 | 0.0165 | No |
| 37 | Thbs1 | 12740 | -0.120 | 0.0132 | No |
| 38 | Hdac1 | 13306 | -0.146 | -0.0013 | No |
| 39 | Tgfbr1 | 13829 | -0.173 | -0.0112 | No |
| 40 | Ppp1r15a | 13832 | -0.173 | 0.0050 | No |
| 41 | Tgif1 | 13952 | -0.179 | 0.0158 | No |
| 42 | Tgfb1 | 14901 | -0.224 | -0.0105 | No |
| 43 | Arid4b | 14940 | -0.226 | 0.0089 | No |
| 44 | Smurf1 | 15164 | -0.235 | 0.0199 | No |
| 45 | Smad6 | 15181 | -0.236 | 0.0413 | No |
| 46 | Bmpr2 | 16812 | -0.325 | -0.0096 | No |
| 47 | Hipk2 | 17711 | -0.392 | -0.0176 | No |
| 48 | Eng | 19619 | -0.673 | -0.0497 | No |
| 49 | Pmepa1 | 19781 | -0.743 | 0.0123 | No |
