Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group2_versus_Group4.GMP.neu_Pheno.cls #Group2_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	-0.22925746
Normalized Enrichment Score (NES)	-0.9631529
Nominal p-value	0.48023716
FDR q-value	1.0
FWER p-Value	0.989

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccp110	125	0.811	0.0104	No
2	Tchh	171	0.765	0.0239	No
3	Ctsd	204	0.737	0.0376	No
4	Stom	217	0.727	0.0520	No
5	H2ac25	455	0.628	0.0530	No
6	Klf4	460	0.625	0.0657	No
7	App	583	0.597	0.0718	No
8	H1f2	648	0.576	0.0805	No
9	Ralgds	875	0.532	0.0801	No
10	Rhbdf2	1079	0.498	0.0801	No
11	Fos	1092	0.496	0.0898	No
12	Hras	1426	0.454	0.0824	No
13	Sdc1	1579	0.438	0.0837	No
14	Ada	1773	0.421	0.0827	No
15	Tpd52l1	1978	0.402	0.0807	No
16	Alox8	2094	0.396	0.0831	No
17	Cd82	2131	0.393	0.0894	No
18	Ddit4	2179	0.389	0.0951	No
19	Mdm2	2372	0.373	0.0931	No
20	S100a4	2402	0.372	0.0993	No
21	Vdr	2624	0.354	0.0955	No
22	Jag2	2956	0.334	0.0857	No
23	Slc7a11	2986	0.331	0.0911	No
24	Rps12	3045	0.326	0.0949	No
25	Rgs16	3220	0.315	0.0926	No
26	Hspa4l	3239	0.315	0.0982	No
27	Abcc5	3261	0.314	0.1036	No
28	Btg2	3431	0.304	0.1014	No
29	Zfp36l1	3432	0.304	0.1077	No
30	Ifi30	3618	0.292	0.1044	No
31	Foxo3	3855	0.280	0.0983	No
32	Prmt2	3916	0.276	0.1009	No
33	Jun	4204	0.262	0.0919	No
34	Eps8l2	4680	0.235	0.0728	No
35	Nupr1	4682	0.235	0.0776	No
36	Pcna	4692	0.235	0.0820	No
37	Ip6k2	4714	0.233	0.0857	No
38	Ccnk	4765	0.230	0.0880	No
39	Aen	4864	0.225	0.0877	No
40	Rnf19b	4927	0.220	0.0891	No
41	Slc35d1	4991	0.218	0.0904	No
42	Hbegf	5027	0.216	0.0931	No
43	Bak1	5173	0.209	0.0901	No
44	Hexim1	5354	0.198	0.0851	No
45	Rrp8	5455	0.194	0.0841	No
46	Polh	5459	0.193	0.0879	No
47	Slc3a2	5464	0.193	0.0917	No
48	Cyfip2	5534	0.189	0.0921	No
49	Tgfa	5678	0.187	0.0888	No
50	Mknk2	5783	0.181	0.0873	No
51	Elp1	5821	0.179	0.0891	No
52	Ndrg1	5832	0.178	0.0923	No
53	Rps27l	5930	0.174	0.0910	No
54	Sphk1	5972	0.173	0.0925	No
55	Cdh13	5992	0.172	0.0951	No
56	Klk8	6114	0.166	0.0925	No
57	Triap1	6306	0.156	0.0861	No
58	Ei24	6423	0.151	0.0833	No
59	Retsat	6448	0.150	0.0852	No
60	Itgb4	6616	0.144	0.0798	No
61	Pvt1	6722	0.138	0.0773	No
62	Sec61a1	6763	0.136	0.0781	No
63	Txnip	6869	0.129	0.0755	No
64	Def6	6874	0.129	0.0779	No
65	Apaf1	7022	0.122	0.0730	No
66	Mapkapk3	7052	0.121	0.0740	No
67	Rap2b	7430	0.105	0.0572	No
68	Trib3	7474	0.104	0.0572	No
69	Rab40c	7492	0.103	0.0585	No
70	Tprkb	7501	0.103	0.0602	No
71	Rchy1	7518	0.102	0.0615	No
72	Tax1bp3	7575	0.099	0.0607	No
73	Socs1	7605	0.098	0.0613	No
74	Fdxr	7626	0.097	0.0622	No
75	Ccnd2	7869	0.089	0.0519	No
76	Pmm1	7940	0.087	0.0502	No
77	Sat1	7949	0.086	0.0515	No
78	Ccng1	8061	0.081	0.0476	No
79	Fas	8151	0.077	0.0447	No
80	Plk3	8210	0.074	0.0433	No
81	Trafd1	8218	0.074	0.0445	No
82	Prkab1	8377	0.066	0.0379	No
83	Fuca1	8477	0.062	0.0342	No
84	Rad9a	8551	0.060	0.0317	No
85	Abhd4	8561	0.059	0.0325	No
86	S100a10	8783	0.049	0.0224	No
87	Fbxw7	8802	0.049	0.0225	No
88	Casp1	8945	0.042	0.0162	No
89	Tap1	9210	0.031	0.0036	No
90	Ercc5	9216	0.031	0.0039	No
91	Plk2	9551	0.016	-0.0126	No
92	Cdkn2aip	9606	0.013	-0.0150	No
93	Cebpa	9642	0.011	-0.0166	No
94	Osgin1	9736	0.007	-0.0211	No
95	Dnttip2	9739	0.007	-0.0211	No
96	Irag2	9844	0.002	-0.0263	No
97	Rpl36	10198	-0.011	-0.0438	No
98	Kif13b	10234	-0.012	-0.0453	No
99	Gadd45a	10586	-0.026	-0.0625	No
100	Nudt15	10643	-0.029	-0.0647	No
101	Rb1	10656	-0.030	-0.0647	No
102	Abat	10660	-0.030	-0.0643	No
103	Tm7sf3	10747	-0.032	-0.0679	No
104	Hdac3	10758	-0.033	-0.0677	No
105	Tspyl2	10928	-0.041	-0.0754	No
106	Ninj1	10966	-0.043	-0.0764	No
107	Sp1	11186	-0.052	-0.0864	No
108	Hmox1	11210	-0.053	-0.0864	No
109	Xpc	11367	-0.060	-0.0931	No
110	Notch1	11368	-0.060	-0.0918	No
111	Fam162a	11507	-0.067	-0.0974	No
112	Ier5	11540	-0.068	-0.0976	No
113	Plxnb2	11869	-0.085	-0.1124	No
114	Cdk5r1	11978	-0.089	-0.1160	No
115	Rxra	12209	-0.100	-0.1255	No
116	Hint1	12245	-0.102	-0.1252	No
117	Wwp1	12269	-0.103	-0.1242	No
118	Coq8a	12472	-0.110	-0.1321	No
119	Pom121	12620	-0.115	-0.1372	No
120	Sfn	12726	-0.120	-0.1400	No
121	Ppp1r15a	13832	-0.173	-0.1921	No
122	Nol8	13898	-0.176	-0.1917	No
123	Ak1	14219	-0.191	-0.2039	No
124	St14	14324	-0.196	-0.2051	No
125	Ankra2	14346	-0.197	-0.2021	No
126	Dgka	14359	-0.198	-0.1986	No
127	Sesn1	14473	-0.203	-0.2001	No
128	Ldhb	14495	-0.204	-0.1970	No
129	Vwa5a	14653	-0.212	-0.2005	No
130	Cdkn1a	14725	-0.216	-0.1996	No
131	Sertad3	14739	-0.217	-0.1958	No
132	Rad51c	14754	-0.217	-0.1920	No
133	Mxd4	14765	-0.218	-0.1880	No
134	Tgfb1	14901	-0.224	-0.1902	No
135	Ppm1d	14984	-0.228	-0.1896	No
136	Cd81	15187	-0.236	-0.1949	No
137	Ccnd3	15293	-0.241	-0.1953	No
138	Zmat3	15330	-0.243	-0.1921	No
139	Ddb2	15337	-0.243	-0.1874	No
140	Pdgfa	15481	-0.250	-0.1894	No
141	Btg1	15763	-0.266	-0.1981	No
142	Acvr1b	15951	-0.277	-0.2018	No
143	Perp	16054	-0.282	-0.2011	No
144	Slc19a2	16220	-0.291	-0.2034	No
145	Ptpre	16495	-0.307	-0.2109	No
146	Rpl18	16645	-0.315	-0.2119	No
147	Dram1	16749	-0.322	-0.2105	No
148	Bax	16829	-0.326	-0.2077	No
149	Gm2a	16887	-0.329	-0.2038	No
150	Pidd1	17374	-0.363	-0.2208	No
151	Blcap	17543	-0.377	-0.2215	Yes
152	Dcxr	17612	-0.383	-0.2170	Yes
153	Rack1	17664	-0.387	-0.2116	Yes
154	Tob1	17693	-0.390	-0.2049	Yes
155	Gls2	17705	-0.392	-0.1974	Yes
156	Trp53	17850	-0.406	-0.1963	Yes
157	Ctsf	17918	-0.410	-0.1912	Yes
158	Mxd1	17930	-0.411	-0.1833	Yes
159	Irak1	18012	-0.416	-0.1788	Yes
160	Cgrrf1	18106	-0.425	-0.1747	Yes
161	Atf3	18173	-0.432	-0.1691	Yes
162	H2aj	18196	-0.435	-0.1612	Yes
163	Tnfsf9	18251	-0.440	-0.1549	Yes
164	Steap3	18365	-0.452	-0.1512	Yes
165	Iscu	18441	-0.460	-0.1455	Yes
166	Rrad	18465	-0.463	-0.1371	Yes
167	Baiap2	18478	-0.465	-0.1281	Yes
168	Zbtb16	18517	-0.470	-0.1204	Yes
169	Pitpnc1	18522	-0.470	-0.1109	Yes
170	Vamp8	18690	-0.486	-0.1093	Yes
171	Ddit3	18932	-0.518	-0.1107	Yes
172	Tcn2	18995	-0.530	-0.1029	Yes
173	Traf4	19173	-0.560	-0.1003	Yes
174	Procr	19301	-0.586	-0.0946	Yes
175	F2r	19410	-0.614	-0.0873	Yes
176	Tsc22d1	19446	-0.623	-0.0762	Yes
177	Wrap73	19479	-0.631	-0.0648	Yes
178	Csrnp2	19539	-0.646	-0.0545	Yes
179	Ptpn14	19541	-0.646	-0.0412	Yes
180	Ephx1	19567	-0.656	-0.0289	Yes
181	Trp63	19832	-0.780	-0.0261	Yes
182	Fgf13	19904	-0.859	-0.0120	Yes
183	Ier3	19920	-0.877	0.0053	Yes