| Dataset | GMP.GMP.neu_Pheno.cls #Group2_versus_Group4.GMP.neu_Pheno.cls #Group2_versus_Group4_repos |
| Phenotype | GMP.neu_Pheno.cls#Group2_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_KRAS_SIGNALING_UP |
| Enrichment Score (ES) | -0.2521086 |
| Normalized Enrichment Score (NES) | -1.1353321 |
| Nominal p-value | 0.20987654 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.908 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Tnfaip3 | 126 | 0.810 | 0.0130 | No |
| 2 | Klf4 | 460 | 0.625 | 0.0111 | No |
| 3 | Il7r | 487 | 0.619 | 0.0246 | No |
| 4 | Il1rl2 | 508 | 0.614 | 0.0382 | No |
| 5 | H2bc3 | 1049 | 0.502 | 0.0230 | No |
| 6 | Tlr8 | 1053 | 0.502 | 0.0348 | No |
| 7 | Ptcd2 | 1082 | 0.498 | 0.0453 | No |
| 8 | Ptprr | 1137 | 0.491 | 0.0543 | No |
| 9 | Clec4a3 | 1492 | 0.447 | 0.0471 | No |
| 10 | Ero1a | 1498 | 0.447 | 0.0576 | No |
| 11 | Dnmbp | 1628 | 0.433 | 0.0614 | No |
| 12 | Spry2 | 1630 | 0.433 | 0.0717 | No |
| 13 | Rbm4 | 1942 | 0.406 | 0.0657 | No |
| 14 | Ammecr1 | 1961 | 0.404 | 0.0744 | No |
| 15 | Scg5 | 2028 | 0.399 | 0.0806 | No |
| 16 | Hdac9 | 2163 | 0.390 | 0.0832 | No |
| 17 | Tmem158 | 2181 | 0.389 | 0.0916 | No |
| 18 | F13a1 | 2515 | 0.364 | 0.0835 | No |
| 19 | G0s2 | 2622 | 0.354 | 0.0866 | No |
| 20 | Id2 | 2952 | 0.334 | 0.0781 | No |
| 21 | Mafb | 3023 | 0.328 | 0.0823 | No |
| 22 | Kif5c | 3064 | 0.324 | 0.0881 | No |
| 23 | Rgs16 | 3220 | 0.315 | 0.0878 | No |
| 24 | Traf1 | 3221 | 0.315 | 0.0953 | No |
| 25 | Ppbp | 3222 | 0.315 | 0.1028 | No |
| 26 | Sema3b | 3227 | 0.315 | 0.1101 | No |
| 27 | Yrdc | 3272 | 0.313 | 0.1154 | No |
| 28 | Gadd45g | 3365 | 0.309 | 0.1181 | No |
| 29 | Ets1 | 3538 | 0.297 | 0.1165 | No |
| 30 | Cbl | 3698 | 0.289 | 0.1154 | No |
| 31 | Inhba | 3766 | 0.284 | 0.1188 | No |
| 32 | Gfpt2 | 3977 | 0.273 | 0.1148 | No |
| 33 | Etv1 | 4083 | 0.267 | 0.1158 | No |
| 34 | Nin | 4405 | 0.249 | 0.1056 | No |
| 35 | Avl9 | 4595 | 0.239 | 0.1018 | No |
| 36 | Usp12 | 4711 | 0.233 | 0.1016 | No |
| 37 | Strn | 4758 | 0.231 | 0.1048 | No |
| 38 | Hbegf | 5027 | 0.216 | 0.0964 | No |
| 39 | Mycn | 5100 | 0.212 | 0.0979 | No |
| 40 | Pdcd1lg2 | 5160 | 0.210 | 0.0999 | No |
| 41 | Scg3 | 5555 | 0.189 | 0.0846 | No |
| 42 | Reln | 5745 | 0.183 | 0.0794 | No |
| 43 | Cmklr1 | 6344 | 0.154 | 0.0530 | No |
| 44 | Itgbl1 | 6377 | 0.153 | 0.0551 | No |
| 45 | Akap12 | 6820 | 0.132 | 0.0360 | No |
| 46 | Map3k1 | 6975 | 0.124 | 0.0312 | No |
| 47 | Birc3 | 7060 | 0.120 | 0.0298 | No |
| 48 | Plaur | 7401 | 0.107 | 0.0153 | No |
| 49 | Akt2 | 7642 | 0.096 | 0.0055 | No |
| 50 | Ly96 | 7851 | 0.090 | -0.0028 | No |
| 51 | Ccnd2 | 7869 | 0.089 | -0.0016 | No |
| 52 | Flt4 | 8113 | 0.078 | -0.0119 | No |
| 53 | Ccser2 | 8138 | 0.077 | -0.0113 | No |
| 54 | Adam17 | 8177 | 0.076 | -0.0114 | No |
| 55 | Fuca1 | 8477 | 0.062 | -0.0250 | No |
| 56 | Nrp1 | 8666 | 0.054 | -0.0331 | No |
| 57 | St6gal1 | 9042 | 0.038 | -0.0511 | No |
| 58 | Ptgs2 | 9110 | 0.035 | -0.0536 | No |
| 59 | Plvap | 9395 | 0.023 | -0.0674 | No |
| 60 | Lcp1 | 9728 | 0.007 | -0.0839 | No |
| 61 | Scn1b | 9751 | 0.006 | -0.0849 | No |
| 62 | Spon1 | 9769 | 0.006 | -0.0856 | No |
| 63 | F2rl1 | 9891 | 0.000 | -0.0917 | No |
| 64 | Sdccag8 | 10093 | -0.007 | -0.1016 | No |
| 65 | Kcnn4 | 10286 | -0.014 | -0.1110 | No |
| 66 | Tor1aip2 | 10310 | -0.015 | -0.1118 | No |
| 67 | Dusp6 | 10366 | -0.017 | -0.1141 | No |
| 68 | Cbx8 | 10450 | -0.021 | -0.1178 | No |
| 69 | Wdr33 | 10617 | -0.028 | -0.1255 | No |
| 70 | Crot | 10845 | -0.037 | -0.1360 | No |
| 71 | Tspan13 | 11185 | -0.052 | -0.1519 | No |
| 72 | Galnt3 | 11190 | -0.052 | -0.1508 | No |
| 73 | Tnfrsf1b | 11276 | -0.056 | -0.1538 | No |
| 74 | Map4k1 | 11395 | -0.062 | -0.1582 | No |
| 75 | Itgb2 | 11541 | -0.068 | -0.1639 | No |
| 76 | Lat2 | 11554 | -0.069 | -0.1628 | No |
| 77 | Dock2 | 11658 | -0.074 | -0.1663 | No |
| 78 | Itga2 | 11769 | -0.079 | -0.1699 | No |
| 79 | Glrx | 11811 | -0.081 | -0.1700 | No |
| 80 | Ephb2 | 12068 | -0.093 | -0.1807 | No |
| 81 | Evi5 | 12078 | -0.094 | -0.1789 | No |
| 82 | Tspan7 | 12327 | -0.105 | -0.1889 | No |
| 83 | Tmem176b | 12487 | -0.111 | -0.1942 | No |
| 84 | Cdadc1 | 12546 | -0.114 | -0.1945 | No |
| 85 | Cbr4 | 12999 | -0.132 | -0.2140 | No |
| 86 | Plau | 13130 | -0.139 | -0.2173 | No |
| 87 | Spp1 | 13133 | -0.139 | -0.2141 | No |
| 88 | Etv5 | 13241 | -0.143 | -0.2160 | No |
| 89 | Pecam1 | 13656 | -0.164 | -0.2330 | No |
| 90 | Mmp11 | 13658 | -0.164 | -0.2291 | No |
| 91 | Ppp1r15a | 13832 | -0.173 | -0.2337 | No |
| 92 | Irf8 | 13932 | -0.178 | -0.2344 | No |
| 93 | Cxcl10 | 14221 | -0.191 | -0.2444 | No |
| 94 | Gypc | 14376 | -0.199 | -0.2474 | Yes |
| 95 | Mmd | 14426 | -0.200 | -0.2451 | Yes |
| 96 | Ikzf1 | 14510 | -0.205 | -0.2444 | Yes |
| 97 | Dcbld2 | 14519 | -0.206 | -0.2399 | Yes |
| 98 | Fcer1g | 14608 | -0.211 | -0.2392 | Yes |
| 99 | Epb41l3 | 14610 | -0.211 | -0.2343 | Yes |
| 100 | Vwa5a | 14653 | -0.212 | -0.2313 | Yes |
| 101 | Mtmr10 | 14919 | -0.225 | -0.2393 | Yes |
| 102 | Ano1 | 15092 | -0.235 | -0.2423 | Yes |
| 103 | Cfh | 15105 | -0.235 | -0.2373 | Yes |
| 104 | Etv4 | 15205 | -0.237 | -0.2367 | Yes |
| 105 | Cpe | 15206 | -0.237 | -0.2310 | Yes |
| 106 | Laptm5 | 15248 | -0.238 | -0.2274 | Yes |
| 107 | Map7 | 15475 | -0.250 | -0.2328 | Yes |
| 108 | Prdm1 | 15538 | -0.253 | -0.2299 | Yes |
| 109 | Cfb | 15578 | -0.256 | -0.2258 | Yes |
| 110 | Bpgm | 15974 | -0.278 | -0.2390 | Yes |
| 111 | Hkdc1 | 16029 | -0.281 | -0.2350 | Yes |
| 112 | Jup | 16103 | -0.285 | -0.2319 | Yes |
| 113 | Gng11 | 16105 | -0.285 | -0.2252 | Yes |
| 114 | Gucy1a1 | 16185 | -0.289 | -0.2223 | Yes |
| 115 | Zfp639 | 16215 | -0.291 | -0.2168 | Yes |
| 116 | Atg10 | 16235 | -0.292 | -0.2108 | Yes |
| 117 | Trib2 | 16730 | -0.320 | -0.2280 | Yes |
| 118 | Nr1h4 | 16765 | -0.322 | -0.2220 | Yes |
| 119 | Il2rg | 16775 | -0.323 | -0.2148 | Yes |
| 120 | Gpnmb | 16801 | -0.324 | -0.2083 | Yes |
| 121 | Slpi | 16917 | -0.332 | -0.2062 | Yes |
| 122 | Il10ra | 17013 | -0.339 | -0.2029 | Yes |
| 123 | Rabgap1l | 17048 | -0.341 | -0.1965 | Yes |
| 124 | Cd37 | 17064 | -0.342 | -0.1891 | Yes |
| 125 | Nr0b2 | 17082 | -0.343 | -0.1818 | Yes |
| 126 | Btc | 17096 | -0.344 | -0.1742 | Yes |
| 127 | Abcb1a | 17134 | -0.346 | -0.1678 | Yes |
| 128 | Psmb8 | 17186 | -0.351 | -0.1620 | Yes |
| 129 | Tmem176a | 17232 | -0.354 | -0.1558 | Yes |
| 130 | Car2 | 17268 | -0.357 | -0.1491 | Yes |
| 131 | Adam8 | 17283 | -0.358 | -0.1413 | Yes |
| 132 | Ctss | 17513 | -0.374 | -0.1439 | Yes |
| 133 | Wnt7a | 17673 | -0.389 | -0.1426 | Yes |
| 134 | Fbxo4 | 17681 | -0.389 | -0.1337 | Yes |
| 135 | Ptbp2 | 17780 | -0.399 | -0.1291 | Yes |
| 136 | Cab39l | 17866 | -0.408 | -0.1236 | Yes |
| 137 | Aldh1a3 | 17952 | -0.413 | -0.1181 | Yes |
| 138 | Hsd11b1 | 17977 | -0.414 | -0.1094 | Yes |
| 139 | Satb1 | 18229 | -0.438 | -0.1116 | Yes |
| 140 | Plek2 | 18266 | -0.441 | -0.1029 | Yes |
| 141 | Prelid3b | 18382 | -0.453 | -0.0979 | Yes |
| 142 | Ank | 18421 | -0.458 | -0.0889 | Yes |
| 143 | Adgra2 | 18476 | -0.465 | -0.0805 | Yes |
| 144 | Gprc5b | 18925 | -0.517 | -0.0907 | Yes |
| 145 | Trib1 | 18933 | -0.518 | -0.0787 | Yes |
| 146 | Csf2ra | 19142 | -0.554 | -0.0760 | Yes |
| 147 | Angptl4 | 19210 | -0.567 | -0.0658 | Yes |
| 148 | Btbd3 | 19323 | -0.591 | -0.0574 | Yes |
| 149 | Zfp277 | 19344 | -0.598 | -0.0441 | Yes |
| 150 | Cxcr4 | 19477 | -0.631 | -0.0357 | Yes |
| 151 | Arg1 | 19502 | -0.638 | -0.0217 | Yes |
| 152 | Tfpi | 19534 | -0.645 | -0.0079 | Yes |
| 153 | Eng | 19619 | -0.673 | 0.0039 | Yes |
| 154 | Adgrl4 | 19670 | -0.693 | 0.0179 | Yes |

