Details for gene set HALLMARK_INTERFERON_GAMMA

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group2_versus_Group4.GMP.neu_Pheno.cls #Group2_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)	-0.26582924
Normalized Enrichment Score (NES)	-1.1071951
Nominal p-value	0.30390143
FDR q-value	0.8918131
FWER p-Value	0.935

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Myd88	1	1.425	0.0318	No
2	Tnfaip3	126	0.810	0.0437	No
3	Cd74	302	0.681	0.0502	No
4	Isg15	470	0.623	0.0557	No
5	Pnp	615	0.585	0.0615	No
6	Ptpn6	1058	0.501	0.0505	No
7	Ifit3	1059	0.501	0.0617	No
8	Fgl2	1189	0.484	0.0660	No
9	Irf1	1358	0.463	0.0679	No
10	Irf9	1505	0.446	0.0706	No
11	Pim1	1706	0.426	0.0700	No
12	Marchf1	1843	0.414	0.0724	No
13	Parp14	1900	0.410	0.0788	No
14	Il4ra	2261	0.382	0.0692	No
15	Hif1a	2678	0.351	0.0561	No
16	Ptpn2	2957	0.334	0.0496	No
17	Sod2	2989	0.331	0.0554	No
18	Stat1	3003	0.330	0.0622	No
19	Ube2l6	3310	0.311	0.0537	No
20	Pfkp	3389	0.307	0.0567	No
21	H2-Aa	3414	0.305	0.0623	No
22	Ifi30	3618	0.292	0.0586	No
23	Psma3	3950	0.274	0.0481	No
24	Tnfaip6	4344	0.252	0.0339	No
25	Cd69	4475	0.244	0.0328	No
26	Plscr1	4754	0.231	0.0240	No
27	Vcam1	4800	0.228	0.0268	No
28	Nup93	4840	0.226	0.0299	No
29	Nfkbia	4863	0.225	0.0338	No
30	Tnfaip2	5178	0.208	0.0227	No
31	Cmtr1	5504	0.190	0.0106	No
32	Fcgr1	5803	0.180	-0.0004	No
33	Cd86	5857	0.177	0.0009	No
34	Ogfr	5950	0.173	0.0002	No
35	Cd40	5951	0.173	0.0040	No
36	Gch1	6039	0.170	0.0035	No
37	Psma2	6057	0.169	0.0064	No
38	Rnf213	6074	0.168	0.0093	No
39	Cd38	6262	0.159	0.0035	No
40	Ciita	6301	0.157	0.0051	No
41	Cmklr1	6344	0.154	0.0064	No
42	Isg20	6519	0.149	0.0010	No
43	Gbp3	6548	0.147	0.0029	No
44	Il7	6574	0.146	0.0049	No
45	Stat3	6819	0.132	-0.0045	No
46	Cmpk2	6824	0.132	-0.0017	No
47	Bank1	6839	0.131	0.0005	No
48	Txnip	6869	0.129	0.0019	No
49	Samd9l	7225	0.113	-0.0134	No
50	Bst2	7266	0.110	-0.0130	No
51	Slc25a28	7418	0.106	-0.0182	No
52	Adar	7465	0.104	-0.0182	No
53	Socs1	7605	0.098	-0.0230	No
54	Znfx1	7829	0.091	-0.0322	No
55	Psmb2	7903	0.088	-0.0339	No
56	Lap3	7908	0.088	-0.0321	No
57	Mthfd2	8140	0.077	-0.0420	No
58	Fas	8151	0.077	-0.0408	No
59	Trafd1	8218	0.074	-0.0425	No
60	Pla2g4a	8267	0.072	-0.0433	No
61	Pnpt1	8435	0.064	-0.0503	No
62	Zbp1	8582	0.058	-0.0563	No
63	Sri	8784	0.049	-0.0654	No
64	Eif2ak2	8858	0.046	-0.0680	No
65	Casp1	8945	0.042	-0.0714	No
66	Itgb7	9049	0.038	-0.0757	No
67	Wars1	9060	0.038	-0.0754	No
68	Ptgs2	9110	0.035	-0.0771	No
69	Tap1	9210	0.031	-0.0814	No
70	Trim25	9260	0.030	-0.0832	No
71	Dhx58	9504	0.018	-0.0950	No
72	Rigi	9533	0.016	-0.0960	No
73	St3gal5	9563	0.015	-0.0972	No
74	Psme2	9566	0.015	-0.0969	No
75	Rbck1	9693	0.009	-0.1031	No
76	Ripk1	9862	0.001	-0.1115	No
77	Oas2	10082	-0.006	-0.1224	No
78	Selp	10275	-0.014	-0.1318	No
79	Nampt	10319	-0.015	-0.1336	No
80	Lats2	10348	-0.017	-0.1346	No
81	Tapbp	10556	-0.025	-0.1445	No
82	Rapgef6	10562	-0.025	-0.1442	No
83	Casp4	10654	-0.030	-0.1481	No
84	Ifit2	10893	-0.039	-0.1592	No
85	Jak2	11092	-0.047	-0.1681	No
86	Batf2	11110	-0.048	-0.1679	No
87	Irf2	11169	-0.051	-0.1697	No
88	Eif4e3	11183	-0.051	-0.1692	No
89	Arl4a	11240	-0.054	-0.1708	No
90	Oas3	11279	-0.056	-0.1715	No
91	Psmb10	11350	-0.060	-0.1737	No
92	Il18bp	11651	-0.074	-0.1871	No
93	Ifi44	11916	-0.087	-0.1985	No
94	Samhd1	12024	-0.091	-0.2018	No
95	Ripk2	12250	-0.102	-0.2109	No
96	B2m	12305	-0.104	-0.2113	No
97	St8sia4	12314	-0.104	-0.2093	No
98	Ptpn1	12419	-0.109	-0.2121	No
99	Sppl2a	12611	-0.115	-0.2192	No
100	Icam1	12631	-0.116	-0.2176	No
101	Rnf31	12723	-0.120	-0.2195	No
102	Irf4	13096	-0.137	-0.2351	No
103	Socs3	13231	-0.143	-0.2387	No
104	Pml	13237	-0.143	-0.2357	No
105	Auts2	13474	-0.154	-0.2442	No
106	Il15ra	13621	-0.162	-0.2479	No
107	Psme1	13733	-0.167	-0.2497	No
108	Isoc1	13738	-0.168	-0.2462	No
109	Nlrc5	13764	-0.169	-0.2437	No
110	Irf8	13932	-0.178	-0.2481	No
111	Helz2	13968	-0.179	-0.2458	No
112	Ncoa3	14037	-0.183	-0.2452	No
113	Ifi27	14166	-0.189	-0.2474	No
114	Cxcl10	14221	-0.191	-0.2458	No
115	Tor1b	14453	-0.201	-0.2530	No
116	Nod1	14660	-0.213	-0.2586	No
117	Cdkn1a	14725	-0.216	-0.2570	No
118	Trim14	14887	-0.224	-0.2601	No
119	Ifi35	14978	-0.228	-0.2595	No
120	Cfh	15105	-0.235	-0.2606	Yes
121	Lcp2	15161	-0.235	-0.2581	Yes
122	Arid5b	15282	-0.240	-0.2588	Yes
123	Nfkb1	15302	-0.242	-0.2543	Yes
124	Ifitm2	15303	-0.242	-0.2489	Yes
125	Irf7	15339	-0.243	-0.2452	Yes
126	Cfb	15578	-0.256	-0.2515	Yes
127	Trim21	15722	-0.263	-0.2528	Yes
128	Btg1	15763	-0.266	-0.2489	Yes
129	Stat2	15809	-0.269	-0.2451	Yes
130	Casp8	15932	-0.275	-0.2451	Yes
131	Bpgm	15974	-0.278	-0.2409	Yes
132	Ifih1	15985	-0.279	-0.2352	Yes
133	Ifitm3	16217	-0.291	-0.2403	Yes
134	Casp7	16429	-0.304	-0.2442	Yes
135	Tdrd7	16586	-0.311	-0.2450	Yes
136	Gpr18	16709	-0.319	-0.2441	Yes
137	Mvp	16813	-0.325	-0.2420	Yes
138	Peli1	16850	-0.327	-0.2365	Yes
139	Parp12	16981	-0.336	-0.2355	Yes
140	Il10ra	17013	-0.339	-0.2295	Yes
141	Epsti1	17158	-0.348	-0.2289	Yes
142	P2ry14	17167	-0.349	-0.2215	Yes
143	Psmb8	17186	-0.351	-0.2146	Yes
144	Rsad2	17440	-0.367	-0.2191	Yes
145	Pde4b	17666	-0.388	-0.2218	Yes
146	Stat4	17728	-0.394	-0.2160	Yes
147	Ly6e	18125	-0.428	-0.2264	Yes
148	Irf5	18187	-0.434	-0.2198	Yes
149	Vamp5	18202	-0.436	-0.2107	Yes
150	Oasl1	18294	-0.445	-0.2054	Yes
151	Sp110	18687	-0.485	-0.2142	Yes
152	Vamp8	18690	-0.486	-0.2035	Yes
153	Ifnar2	18757	-0.494	-0.1957	Yes
154	Psmb9	18812	-0.500	-0.1873	Yes
155	Usp18	18876	-0.511	-0.1790	Yes
156	Herc6	19015	-0.532	-0.1741	Yes
157	Rtp4	19242	-0.573	-0.1726	Yes
158	Lysmd2	19445	-0.623	-0.1689	Yes
159	Lgals3bp	19553	-0.651	-0.1597	Yes
160	H2-DMa	19634	-0.680	-0.1485	Yes
161	Casp3	19689	-0.700	-0.1356	Yes
162	Xaf1	19698	-0.702	-0.1202	Yes
163	Ddx60	19723	-0.715	-0.1055	Yes
164	Tnfsf10	19771	-0.739	-0.0913	Yes
165	Nmi	19819	-0.771	-0.0764	Yes
166	Cd274	19869	-0.817	-0.0606	Yes
167	Trim26	19906	-0.865	-0.0431	Yes
168	Il15	19997	-1.073	-0.0236	Yes
169	Mx2	20005	-1.117	0.0011	Yes