Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group2_versus_Group4.GMP.neu_Pheno.cls #Group2_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.15572955
Normalized Enrichment Score (NES)	-0.70764476
Nominal p-value	0.90176815
FDR q-value	0.88131654
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ercc1	393	0.645	-0.0010	No
2	Nelfcd	484	0.620	0.0125	No
3	Pnp	615	0.585	0.0230	No
4	Vps37b	656	0.576	0.0378	No
5	Srsf6	794	0.548	0.0469	No
6	Polr2d	909	0.526	0.0564	No
7	Edf1	1315	0.466	0.0496	No
8	Polr3c	1323	0.465	0.0628	No
9	Polr2e	1656	0.431	0.0587	No
10	Nt5c	1726	0.424	0.0675	No
11	Ada	1773	0.421	0.0775	No
12	Mrpl40	2009	0.401	0.0773	No
13	Gtf2f1	2219	0.385	0.0780	No
14	Ercc2	2366	0.373	0.0816	No
15	Ssrp1	2394	0.372	0.0910	No
16	Polr2a	2466	0.368	0.0982	No
17	Sf3a3	2662	0.353	0.0986	No
18	Taf10	2718	0.349	0.1060	No
19	Taf9	2806	0.344	0.1117	No
20	Alyref	2825	0.343	0.1207	No
21	Ak3	2863	0.339	0.1288	No
22	Ddb1	2959	0.334	0.1337	No
23	Hcls1	3097	0.323	0.1362	No
24	Eif1b	3314	0.311	0.1344	No
25	Polr1c	3437	0.304	0.1371	No
26	Gtf2h1	3909	0.276	0.1215	No
27	Cda	3964	0.273	0.1267	No
28	Nme3	4305	0.254	0.1170	No
29	Ercc3	4379	0.250	0.1206	No
30	Pde6g	4406	0.249	0.1266	No
31	Tarbp2	4437	0.246	0.1322	No
32	Nfx1	4506	0.242	0.1359	No
33	Pcna	4692	0.235	0.1334	No
34	Poll	4822	0.227	0.1335	No
35	Nelfb	5077	0.213	0.1269	No
36	Polr2j	5285	0.203	0.1225	No
37	Rfc4	5336	0.200	0.1258	No
38	Polh	5459	0.193	0.1253	No
39	Impdh2	5488	0.191	0.1294	No
40	Pold3	5722	0.184	0.1231	No
41	Umps	5926	0.174	0.1179	No
42	Fen1	6030	0.170	0.1177	No
43	Polr1d	6047	0.169	0.1218	No
44	Rad51	6241	0.161	0.1168	No
45	Snapc4	6324	0.156	0.1172	No
46	Adcy6	6410	0.152	0.1173	No
47	Npr2	6518	0.149	0.1163	No
48	Lig1	6726	0.137	0.1099	No
49	Sec61a1	6763	0.136	0.1120	No
50	Cmpk2	6824	0.132	0.1128	No
51	Taf6	6882	0.129	0.1137	No
52	Ercc4	7058	0.120	0.1084	No
53	Nudt21	7238	0.112	0.1027	No
54	Supt5	7385	0.108	0.0985	No
55	Cetn2	7633	0.096	0.0889	No
56	Taf13	7683	0.095	0.0891	No
57	Surf1	7722	0.092	0.0899	No
58	Dad1	7879	0.089	0.0847	No
59	Aprt	8245	0.073	0.0684	No
60	Gtf2b	8283	0.071	0.0686	No
61	Bcap31	8345	0.068	0.0675	No
62	Gtf2a2	8350	0.067	0.0693	No
63	Dgcr8	8426	0.064	0.0674	No
64	Gtf3c5	8810	0.048	0.0495	No
65	Cant1	9091	0.036	0.0365	No
66	Ercc5	9216	0.031	0.0312	No
67	Eloa	9258	0.030	0.0300	No
68	Tk2	9361	0.024	0.0255	No
69	Smad5	9484	0.019	0.0199	No
70	Polr2f	9755	0.006	0.0065	No
71	Arl6ip1	9800	0.005	0.0045	No
72	Brf2	9839	0.002	0.0026	No
73	Ccno	9983	-0.001	-0.0045	No
74	Polr2k	9988	-0.001	-0.0047	No
75	Clp1	10044	-0.004	-0.0073	No
76	Dctn4	10052	-0.005	-0.0076	No
77	Sdcbp	10500	-0.023	-0.0294	No
78	Dguok	10618	-0.028	-0.0344	No
79	Gtf2h5	11231	-0.054	-0.0637	No
80	Cstf3	11326	-0.058	-0.0667	No
81	Xpc	11367	-0.060	-0.0670	No
82	Nme1	11437	-0.063	-0.0686	No
83	Ago4	11448	-0.064	-0.0672	No
84	Rrm2b	11525	-0.067	-0.0691	No
85	Cox17	11545	-0.069	-0.0680	No
86	Gtf2h3	11592	-0.071	-0.0683	No
87	Pole4	11616	-0.072	-0.0673	No
88	Rae1	11684	-0.075	-0.0685	No
89	Sac3d1	12039	-0.092	-0.0836	No
90	Mpc2	12108	-0.095	-0.0843	No
91	Dut	12231	-0.101	-0.0875	No
92	Adrm1	12251	-0.102	-0.0855	No
93	Pold1	12299	-0.104	-0.0848	No
94	Polb	12539	-0.113	-0.0935	No
95	Pom121	12620	-0.115	-0.0942	No
96	Rnmt	12986	-0.132	-0.1087	No
97	Snapc5	13410	-0.150	-0.1256	No
98	Rbx1	13877	-0.175	-0.1440	No
99	Taf1c	14036	-0.183	-0.1466	No
100	Ak1	14219	-0.191	-0.1502	Yes
101	Gpx4	14245	-0.192	-0.1458	Yes
102	Polr2h	14333	-0.197	-0.1445	Yes
103	Nelfe	14375	-0.199	-0.1407	Yes
104	Pola1	14470	-0.203	-0.1396	Yes
105	Rala	14505	-0.205	-0.1353	Yes
106	Nudt9	14559	-0.208	-0.1319	Yes
107	Zwint	14759	-0.217	-0.1356	Yes
108	Usp11	14858	-0.223	-0.1340	Yes
109	Polr2i	14924	-0.226	-0.1307	Yes
110	Rfc5	14974	-0.228	-0.1266	Yes
111	Polr1h	14997	-0.229	-0.1210	Yes
112	Ddb2	15337	-0.243	-0.1310	Yes
113	Gmpr2	15528	-0.253	-0.1332	Yes
114	Rad52	15640	-0.259	-0.1312	Yes
115	Nt5c3	15679	-0.261	-0.1255	Yes
116	Aaas	15725	-0.264	-0.1201	Yes
117	Polr2c	16014	-0.280	-0.1264	Yes
118	Zfp707	16207	-0.291	-0.1276	Yes
119	Ncbp2	16262	-0.293	-0.1218	Yes
120	Tsg101	16386	-0.302	-0.1192	Yes
121	Mpg	16387	-0.302	-0.1104	Yes
122	Prim1	16542	-0.310	-0.1091	Yes
123	Polr3gl	16699	-0.318	-0.1077	Yes
124	Pold4	16739	-0.321	-0.1003	Yes
125	Rev3l	16744	-0.321	-0.0912	Yes
126	Gsdme	16796	-0.324	-0.0843	Yes
127	Taf12	16919	-0.332	-0.0808	Yes
128	Tyms	17234	-0.354	-0.0863	Yes
129	Stx3	17365	-0.363	-0.0823	Yes
130	Ercc8	17462	-0.370	-0.0763	Yes
131	Pola2	17572	-0.380	-0.0707	Yes
132	Upf3b	17620	-0.384	-0.0619	Yes
133	Pde4b	17666	-0.388	-0.0529	Yes
134	Supt4a	17704	-0.391	-0.0434	Yes
135	Trp53	17850	-0.406	-0.0388	Yes
136	Nme4	17960	-0.413	-0.0323	Yes
137	Rpa2	18208	-0.437	-0.0320	Yes
138	Polr2g	18243	-0.440	-0.0209	Yes
139	Rfc2	18342	-0.450	-0.0128	Yes
140	Itpa	18381	-0.453	-0.0015	Yes
141	Vps28	18591	-0.478	0.0019	Yes
142	Rpa3	18700	-0.487	0.0107	Yes
143	Ell	19397	-0.611	-0.0066	Yes
144	Guk1	19556	-0.652	0.0045	Yes
145	Rfc3	19573	-0.657	0.0228	Yes