DatasetGMP.GMP.neu_Pheno.cls
#Group2_versus_Group4.GMP.neu_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_BILE_ACID_METABOLISM
Enrichment Score (ES)-0.25282493
Normalized Enrichment Score (NES)-1.1315895
Nominal p-value0.17764471
FDR q-value0.99953175
FWER p-Value0.91
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_BILE_ACID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gclm4770.6220.0012No
2Abca55220.6110.0236No
3Dhcr246660.5740.0396No
4Cyp46a16710.5730.0625No
5Scp27580.5550.0806No
6Idi19250.5230.0934No
7Ephx210720.5000.1062No
8Klf111940.4830.1196No
9Abcg415360.4410.1203No
10Pecr21870.3880.1034No
11Lck22170.3850.1174No
12Slc27a526520.3530.1099No
13Efhc128490.3410.1138No
14Dio231440.3200.1120No
15Aldh9a132620.3140.1188No
16Hao133460.3100.1271No
17Idh134290.3040.1353No
18Gnpat39370.2750.1209No
19Fads142180.2610.1174No
20Abcd150350.2150.0851No
21Acsl553270.2010.0786No
22Aldh8a155180.1900.0767No
23Paox60510.1690.0569No
24Npc160970.1670.0614No
25Retsat64480.1500.0498No
26Acsl166580.1410.0451No
27Slc23a272640.1100.0191No
28Abcd374370.1050.0147No
29Fdxr76260.0970.0092No
30Sult2b177090.0940.0089No
31Amacr79340.0870.0012No
32Aqp979430.0860.0042No
33Lonp283640.067-0.0141No
34Bcar387440.051-0.0311No
35Fads288690.046-0.0355No
36Cyp27a190460.038-0.0428No
37Hsd17b492190.031-0.0502No
38Rbp194040.023-0.0585No
39Hacl194720.019-0.0611No
40Ar94970.018-0.0615No
41Sod195010.018-0.0610No
42Pex695050.018-0.0604No
43Pex11g96870.009-0.0691No
44Gc99050.000-0.0800No
45Pex11a10315-0.015-0.0999No
46Pex1610641-0.029-0.1151No
47Soat210821-0.035-0.1226No
48Idh210842-0.036-0.1221No
49Crot10845-0.037-0.1208No
50Pnpla810866-0.037-0.1203No
51Bmp610993-0.043-0.1248No
52Nedd411257-0.055-0.1358No
53Pxmp211921-0.087-0.1656No
54Abca211963-0.089-0.1640No
55Optn12016-0.091-0.1630No
56Pex2612117-0.096-0.1641No
57Rxra12209-0.100-0.1647No
58Phyh12342-0.105-0.1671No
59Slc23a112704-0.119-0.1804No
60Aldh1a113584-0.160-0.2180No
61Pex713598-0.161-0.2122No
62Isoc113738-0.168-0.2124No
63Pfkm14163-0.189-0.2261No
64Slc22a1814311-0.196-0.2255No
65Pex114461-0.202-0.2249No
66Abca314684-0.214-0.2274No
67Abca614941-0.226-0.2311No
68Gstk114975-0.228-0.2235No
69Akr1d115114-0.235-0.2210No
70Hsd17b1115663-0.261-0.2380No
71Cat15757-0.266-0.2319No
72Slc35b216109-0.285-0.2380No
73Abcd216405-0.303-0.2406Yes
74Slc27a216603-0.312-0.2379Yes
75Nr1h416765-0.322-0.2330Yes
76Atxn116856-0.328-0.2243Yes
77Tfcp2l116903-0.330-0.2132Yes
78Nr0b217082-0.343-0.2083Yes
79Prdx517565-0.379-0.2172Yes
80Abca417832-0.405-0.2142Yes
81Mlycd17901-0.409-0.2011Yes
82Cyp39a118193-0.435-0.1982Yes
83Lipe18215-0.437-0.1816Yes
84Pex1218314-0.447-0.1685Yes
85Pex1318355-0.450-0.1523Yes
86Abca8b18396-0.455-0.1360Yes
87Gnmt18525-0.471-0.1234Yes
88Slc29a118767-0.495-0.1155Yes
89Nr3c218877-0.512-0.1003Yes
90Cyp7b119151-0.557-0.0916Yes
91Abca119251-0.575-0.0734Yes
92Hsd3b719409-0.614-0.0565Yes
93Pex1919436-0.620-0.0328Yes
94Abca919690-0.700-0.0172Yes
95Nudt1219895-0.8440.0066Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_BILE_ACID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_BILE_ACID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for HALLMARK_BILE_ACID_METABOLISM