Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group2_versus_Group4.GMP.neu_Pheno.cls #Group2_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.20725884
Normalized Enrichment Score (NES)	0.99063057
Nominal p-value	0.46356276
FDR q-value	0.7382503
FWER p-Value	0.988

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Itga10	41	0.952	0.0210	Yes
2	Vcl	53	0.904	0.0423	Yes
3	Insig1	83	0.857	0.0616	Yes
4	Cdk8	98	0.837	0.0811	Yes
5	Myh9	305	0.679	0.0872	Yes
6	Msn	712	0.564	0.0804	Yes
7	Actn1	858	0.535	0.0861	Yes
8	Amh	1136	0.491	0.0840	Yes
9	Vasp	1149	0.489	0.0952	Yes
10	Hras	1426	0.454	0.0923	Yes
11	Pten	1655	0.431	0.0913	Yes
12	Dhx16	1931	0.407	0.0873	Yes
13	Irs1	1997	0.401	0.0937	Yes
14	Alox8	2094	0.396	0.0985	Yes
15	Adam15	2178	0.389	0.1037	Yes
16	Gtf2f1	2219	0.385	0.1110	Yes
17	Cdh8	2290	0.379	0.1167	Yes
18	Ctnnd1	2344	0.375	0.1231	Yes
19	Actb	2424	0.371	0.1281	Yes
20	Jam3	2576	0.358	0.1292	Yes
21	Rasa1	2666	0.352	0.1332	Yes
22	Parva	2784	0.345	0.1357	Yes
23	Ywhah	2794	0.345	0.1435	Yes
24	Actg1	3011	0.330	0.1406	Yes
25	Cldn15	3112	0.322	0.1434	Yes
26	Itgb1	3188	0.317	0.1473	Yes
27	Traf1	3221	0.315	0.1533	Yes
28	Egfr	3279	0.313	0.1580	Yes
29	Sgce	3368	0.308	0.1611	Yes
30	Itga3	3455	0.303	0.1641	Yes
31	Actn4	3484	0.301	0.1699	Yes
32	Cdh4	3561	0.295	0.1733	Yes
33	Cntn1	3633	0.292	0.1767	Yes
34	Actn3	3660	0.291	0.1825	Yes
35	Mpzl1	3720	0.288	0.1865	Yes
36	Cap1	3725	0.287	0.1932	Yes
37	Ldlrap1	3913	0.276	0.1905	Yes
38	Gnai1	4024	0.270	0.1915	Yes
39	Mmp2	4078	0.268	0.1953	Yes
40	Cadm2	4196	0.262	0.1957	Yes
41	B4galt1	4207	0.261	0.2016	Yes
42	Itga9	4220	0.260	0.2073	Yes
43	Arhgef6	4441	0.246	0.2021	No
44	Vcam1	4800	0.228	0.1897	No
45	Skap2	4910	0.222	0.1895	No
46	Gnai2	4924	0.221	0.1942	No
47	Adam23	5049	0.214	0.1932	No
48	Epb41l2	5794	0.181	0.1601	No
49	Cd86	5857	0.177	0.1613	No
50	Vcan	5870	0.177	0.1649	No
51	Cldn14	6110	0.167	0.1569	No
52	Inppl1	6145	0.165	0.1592	No
53	Nectin3	6364	0.154	0.1520	No
54	Nrap	6436	0.150	0.1520	No
55	Cx3cl1	6464	0.150	0.1543	No
56	Kcnh2	6467	0.150	0.1578	No
57	Itgb4	6616	0.144	0.1538	No
58	Map3k20	6625	0.143	0.1569	No
59	Evl	6773	0.135	0.1528	No
60	Ctnna1	6911	0.127	0.1489	No
61	Shc1	6995	0.123	0.1478	No
62	Vwf	7136	0.117	0.1435	No
63	Akt2	7642	0.096	0.1204	No
64	Adam9	7907	0.088	0.1093	No
65	Mapk13	8022	0.082	0.1055	No
66	Map4k2	8144	0.077	0.1013	No
67	Tjp1	8147	0.077	0.1031	No
68	Wasl	8306	0.069	0.0968	No
69	Mapk14	8399	0.065	0.0937	No
70	Taok2	8487	0.062	0.0909	No
71	Tsc1	8837	0.047	0.0744	No
72	Thy1	8893	0.045	0.0728	No
73	Myh10	9233	0.030	0.0564	No
74	Sirpa	9247	0.030	0.0565	No
75	Tmem8b	9663	0.010	0.0359	No
76	Pard6g	9785	0.005	0.0299	No
77	Nfasc	9894	0.000	0.0245	No
78	Myl9	9917	0.000	0.0233	No
79	Zyx	9974	-0.001	0.0206	No
80	Ptprc	10000	-0.002	0.0193	No
81	Nectin4	10020	-0.003	0.0185	No
82	Sympk	10062	-0.005	0.0165	No
83	Cadm3	10063	-0.005	0.0166	No
84	Dlg1	10232	-0.012	0.0085	No
85	Tial1	10246	-0.013	0.0081	No
86	Icam4	10303	-0.015	0.0057	No
87	Src	10424	-0.020	0.0001	No
88	Crat	10834	-0.036	-0.0196	No
89	Ikbkg	10901	-0.039	-0.0220	No
90	Negr1	10906	-0.039	-0.0212	No
91	Cdh1	11125	-0.048	-0.0311	No
92	Tubg1	11144	-0.049	-0.0308	No
93	Sdc3	11203	-0.053	-0.0324	No
94	Lama3	11391	-0.062	-0.0403	No
95	Col17a1	11563	-0.070	-0.0473	No
96	Nf2	11602	-0.071	-0.0474	No
97	Rhof	11655	-0.074	-0.0483	No
98	Vav2	11730	-0.077	-0.0501	No
99	Itga2	11769	-0.079	-0.0501	No
100	Plcg1	11883	-0.085	-0.0538	No
101	Slit2	11979	-0.089	-0.0564	No
102	Akt3	11990	-0.090	-0.0547	No
103	Icam1	12631	-0.116	-0.0841	No
104	Cdh6	12699	-0.119	-0.0846	No
105	Syk	12707	-0.119	-0.0821	No
106	Pfn1	12771	-0.122	-0.0823	No
107	Adra1b	12793	-0.122	-0.0804	No
108	Pkd1	12831	-0.123	-0.0793	No
109	Nlgn2	12955	-0.130	-0.0823	No
110	Mdk	13100	-0.137	-0.0863	No
111	Nrxn2	13164	-0.140	-0.0860	No
112	Pals1	13527	-0.157	-0.1005	No
113	Cnn2	13575	-0.159	-0.0990	No
114	Nlgn3	13601	-0.161	-0.0964	No
115	Pecam1	13656	-0.164	-0.0951	No
116	Pik3cb	13778	-0.170	-0.0971	No
117	Nectin1	14079	-0.185	-0.1077	No
118	Exoc4	14095	-0.186	-0.1040	No
119	Thbs3	14106	-0.186	-0.1000	No
120	Shroom2	14570	-0.208	-0.1182	No
121	Arpc2	14690	-0.214	-0.1190	No
122	Actn2	14699	-0.215	-0.1142	No
123	Hadh	14965	-0.227	-0.1221	No
124	Nf1	15082	-0.234	-0.1223	No
125	Calb2	15100	-0.235	-0.1174	No
126	Bmp1	15199	-0.237	-0.1166	No
127	Icam5	15547	-0.254	-0.1279	No
128	Mvd	15720	-0.263	-0.1302	No
129	Nexn	15784	-0.267	-0.1269	No
130	Wnk4	15920	-0.274	-0.1271	No
131	Jup	16103	-0.285	-0.1294	No
132	Cd34	16143	-0.287	-0.1244	No
133	Icam2	16243	-0.293	-0.1223	No
134	Amigo2	16295	-0.296	-0.1177	No
135	Rsu1	16319	-0.297	-0.1116	No
136	Fbn1	16420	-0.304	-0.1093	No
137	Stx4a	16469	-0.306	-0.1043	No
138	Lamb3	16528	-0.308	-0.0998	No
139	Rac2	16546	-0.310	-0.0931	No
140	Nectin2	16679	-0.317	-0.0921	No
141	Lima1	16818	-0.325	-0.0912	No
142	Pik3r3	17047	-0.341	-0.0944	No
143	Col16a1	17622	-0.384	-0.1140	No
144	Myl12b	17792	-0.400	-0.1128	No
145	Nrtn	17833	-0.405	-0.1051	No
146	Ptk2	18091	-0.424	-0.1077	No
147	Amigo1	18151	-0.430	-0.1003	No
148	Rras	18358	-0.451	-0.0998	No
149	Cdh11	18438	-0.460	-0.0926	No
150	Baiap2	18478	-0.465	-0.0833	No
151	Tspan4	19065	-0.539	-0.0998	No
152	Cercam	19192	-0.565	-0.0925	No
153	Pbx2	19219	-0.568	-0.0800	No
154	Atp1a3	19455	-0.626	-0.0767	No
155	Gamt	19492	-0.633	-0.0632	No
156	Layn	19533	-0.645	-0.0496	No
157	Tgfbi	19601	-0.667	-0.0368	No
158	Sorbs3	19730	-0.719	-0.0259	No
159	Cd274	19869	-0.817	-0.0131	No
160	Adamts5	19905	-0.864	0.0061	No