| Dataset | GMP.GMP.neu_Pheno.cls #Group2_versus_Group3.GMP.neu_Pheno.cls #Group2_versus_Group3_repos |
| Phenotype | GMP.neu_Pheno.cls#Group2_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_UV_RESPONSE_DN |
| Enrichment Score (ES) | -0.23210262 |
| Normalized Enrichment Score (NES) | -1.2075856 |
| Nominal p-value | 0.14143427 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.885 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Dusp1 | 340 | 0.605 | 0.0022 | No |
| 2 | Bhlhe40 | 482 | 0.565 | 0.0131 | No |
| 3 | Cap2 | 935 | 0.474 | 0.0055 | No |
| 4 | Cdkn1b | 951 | 0.472 | 0.0198 | No |
| 5 | Rnd3 | 1187 | 0.442 | 0.0221 | No |
| 6 | Irs1 | 1276 | 0.430 | 0.0313 | No |
| 7 | Nfib | 1537 | 0.403 | 0.0311 | No |
| 8 | Anxa2 | 1690 | 0.391 | 0.0359 | No |
| 9 | Gja1 | 2280 | 0.342 | 0.0172 | No |
| 10 | Togaram1 | 2671 | 0.314 | 0.0076 | No |
| 11 | Mmp16 | 2689 | 0.313 | 0.0167 | No |
| 12 | Apbb2 | 2943 | 0.295 | 0.0134 | No |
| 13 | Wdr37 | 3093 | 0.287 | 0.0150 | No |
| 14 | Pdlim5 | 3140 | 0.282 | 0.0217 | No |
| 15 | Abcc1 | 3285 | 0.275 | 0.0232 | No |
| 16 | Mrps31 | 3445 | 0.267 | 0.0237 | No |
| 17 | Pik3cd | 3540 | 0.262 | 0.0273 | No |
| 18 | Atp2b1 | 3562 | 0.260 | 0.0345 | No |
| 19 | Notch2 | 3637 | 0.256 | 0.0390 | No |
| 20 | Synj2 | 3644 | 0.256 | 0.0468 | No |
| 21 | Tent4a | 3848 | 0.245 | 0.0444 | No |
| 22 | Id1 | 3964 | 0.239 | 0.0463 | No |
| 23 | Bmpr1a | 3987 | 0.239 | 0.0528 | No |
| 24 | Ythdc1 | 4255 | 0.224 | 0.0465 | No |
| 25 | Magi2 | 4256 | 0.224 | 0.0536 | No |
| 26 | Phf3 | 4433 | 0.214 | 0.0516 | No |
| 27 | Nr3c1 | 4572 | 0.207 | 0.0512 | No |
| 28 | Col1a1 | 4599 | 0.206 | 0.0565 | No |
| 29 | Atp2c1 | 4618 | 0.205 | 0.0621 | No |
| 30 | Dyrk1a | 4649 | 0.203 | 0.0670 | No |
| 31 | Tjp1 | 4685 | 0.201 | 0.0717 | No |
| 32 | Pten | 4756 | 0.196 | 0.0744 | No |
| 33 | Nrp1 | 5087 | 0.183 | 0.0636 | No |
| 34 | Kcnma1 | 5238 | 0.175 | 0.0617 | No |
| 35 | Atrx | 5295 | 0.173 | 0.0644 | No |
| 36 | Rasa2 | 5418 | 0.167 | 0.0636 | No |
| 37 | Itgb3 | 5440 | 0.166 | 0.0678 | No |
| 38 | Mios | 5445 | 0.166 | 0.0729 | No |
| 39 | Cdk13 | 5590 | 0.159 | 0.0707 | No |
| 40 | Amph | 5686 | 0.154 | 0.0709 | No |
| 41 | Aggf1 | 6237 | 0.130 | 0.0474 | No |
| 42 | Ltbp1 | 6325 | 0.127 | 0.0471 | No |
| 43 | Met | 6575 | 0.117 | 0.0383 | No |
| 44 | Acvr2a | 6626 | 0.115 | 0.0394 | No |
| 45 | Slc22a18 | 6732 | 0.111 | 0.0377 | No |
| 46 | Map1b | 6803 | 0.109 | 0.0376 | No |
| 47 | Pex14 | 7056 | 0.098 | 0.0281 | No |
| 48 | Plpp3 | 7079 | 0.097 | 0.0301 | No |
| 49 | Celf2 | 7180 | 0.092 | 0.0280 | No |
| 50 | Spop | 7291 | 0.089 | 0.0253 | No |
| 51 | Nipbl | 7391 | 0.084 | 0.0230 | No |
| 52 | Smad3 | 7555 | 0.076 | 0.0172 | No |
| 53 | Mt1 | 7574 | 0.075 | 0.0187 | No |
| 54 | Mta1 | 7701 | 0.070 | 0.0146 | No |
| 55 | Col5a2 | 7722 | 0.069 | 0.0157 | No |
| 56 | Dab2 | 7868 | 0.063 | 0.0105 | No |
| 57 | Dlg1 | 8022 | 0.057 | 0.0046 | No |
| 58 | Scaf8 | 8137 | 0.051 | 0.0005 | No |
| 59 | Ldlr | 8219 | 0.048 | -0.0021 | No |
| 60 | Nr1d2 | 8732 | 0.025 | -0.0270 | No |
| 61 | Slc7a1 | 8937 | 0.015 | -0.0368 | No |
| 62 | Insig1 | 9078 | 0.009 | -0.0435 | No |
| 63 | Scn8a | 9180 | 0.005 | -0.0484 | No |
| 64 | Cdc42bpa | 9463 | -0.006 | -0.0624 | No |
| 65 | Sri | 9563 | -0.011 | -0.0671 | No |
| 66 | Ptpn21 | 9595 | -0.012 | -0.0682 | No |
| 67 | Sipa1l1 | 9751 | -0.019 | -0.0754 | No |
| 68 | Smad7 | 9931 | -0.025 | -0.0836 | No |
| 69 | Nek7 | 10056 | -0.031 | -0.0889 | No |
| 70 | Grk5 | 10203 | -0.038 | -0.0950 | No |
| 71 | Inpp4b | 10331 | -0.043 | -0.1000 | No |
| 72 | Sfmbt1 | 10372 | -0.045 | -0.1006 | No |
| 73 | Ica1 | 10400 | -0.046 | -0.1005 | No |
| 74 | Vav2 | 10589 | -0.054 | -0.1082 | No |
| 75 | Cdon | 10770 | -0.061 | -0.1153 | No |
| 76 | Mapk14 | 10785 | -0.061 | -0.1141 | No |
| 77 | Col1a2 | 11031 | -0.071 | -0.1241 | No |
| 78 | Atrn | 11116 | -0.073 | -0.1260 | No |
| 79 | Pdgfrb | 11401 | -0.086 | -0.1376 | No |
| 80 | Kit | 11743 | -0.100 | -0.1515 | No |
| 81 | Fhl2 | 11747 | -0.100 | -0.1485 | No |
| 82 | Akt3 | 12260 | -0.122 | -0.1703 | No |
| 83 | Kalrn | 12269 | -0.122 | -0.1668 | No |
| 84 | Prdm2 | 12280 | -0.123 | -0.1634 | No |
| 85 | Atxn1 | 12290 | -0.123 | -0.1599 | No |
| 86 | Dlc1 | 12331 | -0.125 | -0.1580 | No |
| 87 | Igf1r | 12666 | -0.142 | -0.1702 | No |
| 88 | Map2k5 | 12749 | -0.146 | -0.1697 | No |
| 89 | Nfkb1 | 12793 | -0.148 | -0.1671 | No |
| 90 | Tgfbr3 | 12800 | -0.148 | -0.1627 | No |
| 91 | Tgfbr2 | 12834 | -0.149 | -0.1596 | No |
| 92 | Add3 | 12911 | -0.153 | -0.1586 | No |
| 93 | Ptprm | 13352 | -0.172 | -0.1752 | No |
| 94 | Anxa4 | 13488 | -0.179 | -0.1763 | No |
| 95 | Syne1 | 13672 | -0.188 | -0.1795 | No |
| 96 | Runx1 | 14179 | -0.211 | -0.1982 | No |
| 97 | Rxra | 14595 | -0.231 | -0.2117 | No |
| 98 | Bckdhb | 14759 | -0.241 | -0.2122 | No |
| 99 | Fbln5 | 15037 | -0.254 | -0.2180 | No |
| 100 | Ddah1 | 15164 | -0.259 | -0.2161 | No |
| 101 | Mgll | 15484 | -0.276 | -0.2233 | Yes |
| 102 | Vldlr | 15624 | -0.285 | -0.2212 | Yes |
| 103 | Adora2b | 15748 | -0.291 | -0.2181 | Yes |
| 104 | Cav1 | 15866 | -0.298 | -0.2145 | Yes |
| 105 | Prkce | 16139 | -0.314 | -0.2182 | Yes |
| 106 | Zmiz1 | 16280 | -0.322 | -0.2149 | Yes |
| 107 | Tfpi | 16548 | -0.335 | -0.2177 | Yes |
| 108 | Atp2b4 | 16568 | -0.337 | -0.2079 | Yes |
| 109 | Prkar2b | 16754 | -0.348 | -0.2061 | Yes |
| 110 | Lamc1 | 16961 | -0.361 | -0.2050 | Yes |
| 111 | Pias3 | 17135 | -0.373 | -0.2018 | Yes |
| 112 | Myc | 17216 | -0.379 | -0.1938 | Yes |
| 113 | Pik3r3 | 17319 | -0.386 | -0.1866 | Yes |
| 114 | Gcnt1 | 17418 | -0.392 | -0.1790 | Yes |
| 115 | Rbpms | 17463 | -0.396 | -0.1686 | Yes |
| 116 | Col11a1 | 17671 | -0.413 | -0.1659 | Yes |
| 117 | Plcb4 | 17954 | -0.439 | -0.1661 | Yes |
| 118 | Cacna1a | 18062 | -0.448 | -0.1571 | Yes |
| 119 | Lpar1 | 18131 | -0.454 | -0.1461 | Yes |
| 120 | Prkca | 18274 | -0.469 | -0.1383 | Yes |
| 121 | Fyn | 18614 | -0.506 | -0.1392 | Yes |
| 122 | Pparg | 18626 | -0.507 | -0.1236 | Yes |
| 123 | Mgmt | 18662 | -0.511 | -0.1091 | Yes |
| 124 | F3 | 18696 | -0.516 | -0.0943 | Yes |
| 125 | Cited2 | 18873 | -0.541 | -0.0859 | Yes |
| 126 | Adgrl2 | 19175 | -0.592 | -0.0822 | Yes |
| 127 | Schip1 | 19221 | -0.600 | -0.0654 | Yes |
| 128 | Dbp | 19340 | -0.629 | -0.0513 | Yes |
| 129 | Sdc2 | 19503 | -0.670 | -0.0381 | Yes |
| 130 | Dmac2l | 19877 | -0.870 | -0.0291 | Yes |
| 131 | Arhgef9 | 19997 | -1.146 | 0.0015 | Yes |

