DatasetGMP.GMP.neu_Pheno.cls
#Group2_versus_Group3.GMP.neu_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.neu_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_UV_RESPONSE_DN
Enrichment Score (ES)-0.23210262
Normalized Enrichment Score (NES)-1.2075856
Nominal p-value0.14143427
FDR q-value1.0
FWER p-Value0.885
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_UV_RESPONSE_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Dusp13400.6050.0022No
2Bhlhe404820.5650.0131No
3Cap29350.4740.0055No
4Cdkn1b9510.4720.0198No
5Rnd311870.4420.0221No
6Irs112760.4300.0313No
7Nfib15370.4030.0311No
8Anxa216900.3910.0359No
9Gja122800.3420.0172No
10Togaram126710.3140.0076No
11Mmp1626890.3130.0167No
12Apbb229430.2950.0134No
13Wdr3730930.2870.0150No
14Pdlim531400.2820.0217No
15Abcc132850.2750.0232No
16Mrps3134450.2670.0237No
17Pik3cd35400.2620.0273No
18Atp2b135620.2600.0345No
19Notch236370.2560.0390No
20Synj236440.2560.0468No
21Tent4a38480.2450.0444No
22Id139640.2390.0463No
23Bmpr1a39870.2390.0528No
24Ythdc142550.2240.0465No
25Magi242560.2240.0536No
26Phf344330.2140.0516No
27Nr3c145720.2070.0512No
28Col1a145990.2060.0565No
29Atp2c146180.2050.0621No
30Dyrk1a46490.2030.0670No
31Tjp146850.2010.0717No
32Pten47560.1960.0744No
33Nrp150870.1830.0636No
34Kcnma152380.1750.0617No
35Atrx52950.1730.0644No
36Rasa254180.1670.0636No
37Itgb354400.1660.0678No
38Mios54450.1660.0729No
39Cdk1355900.1590.0707No
40Amph56860.1540.0709No
41Aggf162370.1300.0474No
42Ltbp163250.1270.0471No
43Met65750.1170.0383No
44Acvr2a66260.1150.0394No
45Slc22a1867320.1110.0377No
46Map1b68030.1090.0376No
47Pex1470560.0980.0281No
48Plpp370790.0970.0301No
49Celf271800.0920.0280No
50Spop72910.0890.0253No
51Nipbl73910.0840.0230No
52Smad375550.0760.0172No
53Mt175740.0750.0187No
54Mta177010.0700.0146No
55Col5a277220.0690.0157No
56Dab278680.0630.0105No
57Dlg180220.0570.0046No
58Scaf881370.0510.0005No
59Ldlr82190.048-0.0021No
60Nr1d287320.025-0.0270No
61Slc7a189370.015-0.0368No
62Insig190780.009-0.0435No
63Scn8a91800.005-0.0484No
64Cdc42bpa9463-0.006-0.0624No
65Sri9563-0.011-0.0671No
66Ptpn219595-0.012-0.0682No
67Sipa1l19751-0.019-0.0754No
68Smad79931-0.025-0.0836No
69Nek710056-0.031-0.0889No
70Grk510203-0.038-0.0950No
71Inpp4b10331-0.043-0.1000No
72Sfmbt110372-0.045-0.1006No
73Ica110400-0.046-0.1005No
74Vav210589-0.054-0.1082No
75Cdon10770-0.061-0.1153No
76Mapk1410785-0.061-0.1141No
77Col1a211031-0.071-0.1241No
78Atrn11116-0.073-0.1260No
79Pdgfrb11401-0.086-0.1376No
80Kit11743-0.100-0.1515No
81Fhl211747-0.100-0.1485No
82Akt312260-0.122-0.1703No
83Kalrn12269-0.122-0.1668No
84Prdm212280-0.123-0.1634No
85Atxn112290-0.123-0.1599No
86Dlc112331-0.125-0.1580No
87Igf1r12666-0.142-0.1702No
88Map2k512749-0.146-0.1697No
89Nfkb112793-0.148-0.1671No
90Tgfbr312800-0.148-0.1627No
91Tgfbr212834-0.149-0.1596No
92Add312911-0.153-0.1586No
93Ptprm13352-0.172-0.1752No
94Anxa413488-0.179-0.1763No
95Syne113672-0.188-0.1795No
96Runx114179-0.211-0.1982No
97Rxra14595-0.231-0.2117No
98Bckdhb14759-0.241-0.2122No
99Fbln515037-0.254-0.2180No
100Ddah115164-0.259-0.2161No
101Mgll15484-0.276-0.2233Yes
102Vldlr15624-0.285-0.2212Yes
103Adora2b15748-0.291-0.2181Yes
104Cav115866-0.298-0.2145Yes
105Prkce16139-0.314-0.2182Yes
106Zmiz116280-0.322-0.2149Yes
107Tfpi16548-0.335-0.2177Yes
108Atp2b416568-0.337-0.2079Yes
109Prkar2b16754-0.348-0.2061Yes
110Lamc116961-0.361-0.2050Yes
111Pias317135-0.373-0.2018Yes
112Myc17216-0.379-0.1938Yes
113Pik3r317319-0.386-0.1866Yes
114Gcnt117418-0.392-0.1790Yes
115Rbpms17463-0.396-0.1686Yes
116Col11a117671-0.413-0.1659Yes
117Plcb417954-0.439-0.1661Yes
118Cacna1a18062-0.448-0.1571Yes
119Lpar118131-0.454-0.1461Yes
120Prkca18274-0.469-0.1383Yes
121Fyn18614-0.506-0.1392Yes
122Pparg18626-0.507-0.1236Yes
123Mgmt18662-0.511-0.1091Yes
124F318696-0.516-0.0943Yes
125Cited218873-0.541-0.0859Yes
126Adgrl219175-0.592-0.0822Yes
127Schip119221-0.600-0.0654Yes
128Dbp19340-0.629-0.0513Yes
129Sdc219503-0.670-0.0381Yes
130Dmac2l19877-0.870-0.0291Yes
131Arhgef919997-1.1460.0015Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_UV_RESPONSE_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_UV_RESPONSE_DN: Random ES distribution   
Gene set null distribution of ES for HALLMARK_UV_RESPONSE_DN