Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | GMP.GMP.neu_Pheno.cls #Group2_versus_Group3.GMP.neu_Pheno.cls #Group2_versus_Group3_repos |
| Phenotype | GMP.neu_Pheno.cls#Group2_versus_Group3_repos |
| Upregulated in class | 1 |
| GeneSet | HALLMARK_TGF_BETA_SIGNALING |
| Enrichment Score (ES) | 0.25843066 |
| Normalized Enrichment Score (NES) | 1.050767 |
| Nominal p-value | 0.402 |
| FDR q-value | 0.66386306 |
| FWER p-Value | 0.988 |
| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Cdkn1c | 456 | 0.571 | 0.0333 | Yes |
| 2 | Ctnnb1 | 558 | 0.544 | 0.0817 | Yes |
| 3 | Bcar3 | 924 | 0.476 | 0.1102 | Yes |
| 4 | Ube2d3 | 2006 | 0.366 | 0.0920 | Yes |
| 5 | Slc20a1 | 2558 | 0.321 | 0.0960 | Yes |
| 6 | Tgif1 | 2650 | 0.315 | 0.1223 | Yes |
| 7 | Sptbn1 | 2818 | 0.304 | 0.1438 | Yes |
| 8 | Thbs1 | 3431 | 0.268 | 0.1395 | Yes |
| 9 | Ltbp2 | 3502 | 0.264 | 0.1619 | Yes |
| 10 | Ifngr2 | 3624 | 0.257 | 0.1811 | Yes |
| 11 | Acvr1 | 3819 | 0.246 | 0.1956 | Yes |
| 12 | Hdac1 | 3837 | 0.245 | 0.2189 | Yes |
| 13 | Id1 | 3964 | 0.239 | 0.2361 | Yes |
| 14 | Bmpr1a | 3987 | 0.239 | 0.2584 | Yes |
| 15 | Tjp1 | 4685 | 0.201 | 0.2433 | No |
| 16 | Rhoa | 5117 | 0.181 | 0.2395 | No |
| 17 | Ppp1ca | 5133 | 0.181 | 0.2565 | No |
| 18 | Cdk9 | 7267 | 0.090 | 0.1586 | No |
| 19 | Smad1 | 7276 | 0.089 | 0.1669 | No |
| 20 | Trim33 | 7337 | 0.086 | 0.1724 | No |
| 21 | Smad3 | 7555 | 0.076 | 0.1690 | No |
| 22 | Smurf2 | 7704 | 0.069 | 0.1684 | No |
| 23 | Xiap | 7895 | 0.061 | 0.1649 | No |
| 24 | Apc | 8513 | 0.036 | 0.1376 | No |
| 25 | Map3k7 | 8611 | 0.030 | 0.1357 | No |
| 26 | Ppm1a | 8615 | 0.030 | 0.1385 | No |
| 27 | Rab31 | 8876 | 0.018 | 0.1273 | No |
| 28 | Fkbp1a | 9063 | 0.010 | 0.1190 | No |
| 29 | Junb | 9468 | -0.006 | 0.0993 | No |
| 30 | Arid4b | 9666 | -0.015 | 0.0909 | No |
| 31 | Smad7 | 9931 | -0.025 | 0.0802 | No |
| 32 | Skil | 10207 | -0.038 | 0.0701 | No |
| 33 | Klf10 | 10375 | -0.045 | 0.0662 | No |
| 34 | Id2 | 11101 | -0.073 | 0.0370 | No |
| 35 | Wwtr1 | 11204 | -0.077 | 0.0395 | No |
| 36 | Ski | 11532 | -0.091 | 0.0321 | No |
| 37 | Smurf1 | 11656 | -0.097 | 0.0354 | No |
| 38 | Fnta | 12075 | -0.116 | 0.0259 | No |
| 39 | Furin | 13195 | -0.165 | -0.0139 | No |
| 40 | Ncor2 | 13472 | -0.178 | -0.0102 | No |
| 41 | Tgfb1 | 13944 | -0.199 | -0.0142 | No |
| 42 | Tgfbr1 | 14017 | -0.203 | 0.0022 | No |
| 43 | Ppp1r15a | 14617 | -0.233 | -0.0049 | No |
| 44 | Bmpr2 | 16364 | -0.326 | -0.0602 | No |
| 45 | Hipk2 | 16560 | -0.336 | -0.0370 | No |
| 46 | Pmepa1 | 17358 | -0.389 | -0.0386 | No |
| 47 | Cdh1 | 18493 | -0.492 | -0.0470 | No |
| 48 | Smad6 | 18823 | -0.536 | -0.0108 | No |
| 49 | Eng | 19635 | -0.722 | 0.0196 | No |
