DatasetGMP.GMP.neu_Pheno.cls
#Group2_versus_Group3.GMP.neu_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.neu_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_MITOTIC_SPINDLE
Enrichment Score (ES)0.35502538
Normalized Enrichment Score (NES)1.7231693
Nominal p-value0.0060975607
FDR q-value0.037286226
FWER p-Value0.113
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_MITOTIC_SPINDLE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ppp4r21350.7080.0089Yes
2Arhgap52640.6350.0166Yes
3Stk38l2950.6220.0289Yes
4Vcl2980.6210.0426Yes
5Nek23070.6160.0559Yes
6Racgap14240.5790.0629Yes
7Fgd64530.5720.0742Yes
8Dync1h14580.5700.0867Yes
9Cenpe6010.5320.0914Yes
10Kptn7110.5090.0972Yes
11Ckap57420.5030.1068Yes
12Myo1e7670.4980.1167Yes
13Cep2509860.4660.1161Yes
14Sptan19900.4660.1263Yes
15Myh911770.4430.1268Yes
16Bub113940.4160.1251Yes
17Incenp14060.4150.1338Yes
18Smc314310.4130.1418Yes
19Kif414530.4110.1498Yes
20Arap314890.4080.1571Yes
21Epb41l215060.4060.1653Yes
22Cep19215380.4030.1727Yes
23Mapre115580.4020.1807Yes
24Ect216830.3920.1832Yes
25Lrpprc17320.3870.1894Yes
26Ttk18540.3770.1916Yes
27Anln18800.3740.1987Yes
28Stau122410.3460.1882Yes
29Top2a22520.3450.1954Yes
30Ranbp922750.3420.2019Yes
31Lmnb123410.3380.2061Yes
32Kif1124010.3330.2105Yes
33Tpx224110.3320.2175Yes
34Dynll224430.3290.2232Yes
35Kif1525640.3200.2243Yes
36Pcnt26080.3180.2292Yes
37Tubgcp326290.3160.2352Yes
38Kif5b27850.3050.2342Yes
39Cep7228020.3040.2401Yes
40Sptbn128180.3040.2461Yes
41Arl8a28580.3000.2508Yes
42Farp128760.2990.2566Yes
43Arhgef729090.2970.2616Yes
44Rasa129160.2960.2679Yes
45Nck230470.2890.2678Yes
46Arhgef230730.2880.2729Yes
47Pdlim531400.2820.2758Yes
48Birc531730.2810.2805Yes
49Rhot232250.2780.2841Yes
50Ndc8032270.2780.2902Yes
51Tsc132860.2750.2934Yes
52Kif20b32940.2740.2991Yes
53Cntrl33290.2730.3035Yes
54Cdk5rap235160.2630.3000Yes
55Actn435190.2630.3057Yes
56Cyth235870.2580.3081Yes
57Notch236370.2560.3113Yes
58Aurka36480.2560.3165Yes
59Smc1a37740.2480.3157Yes
60Cenpf37870.2480.3206Yes
61Prc138390.2450.3235Yes
62Arhgef1238780.2430.3270Yes
63Flna39000.2420.3313Yes
64Tubgcp639690.2390.3332Yes
65Kif2340220.2370.3358Yes
66Nin40800.2330.3381Yes
67Ywhae41420.2300.3401Yes
68Kif2241930.2270.3427Yes
69Alms146900.2000.3221Yes
70Pafah1b147370.1970.3242Yes
71Pif147550.1960.3277Yes
72Kntc148700.1910.3262Yes
73Klc148760.1900.3301Yes
74Ezr48970.1900.3333Yes
75Hook349020.1890.3373Yes
76Tlk150880.1830.3321Yes
77Numa151220.1810.3344Yes
78Plk151520.1800.3370Yes
79Epb4151620.1790.3405Yes
80Abl151800.1780.3436Yes
81Mark451810.1780.3476Yes
82Fgd451820.1780.3515Yes
83Cdk152280.1760.3532Yes
84Cdc2753330.1720.3518Yes
85Tubd154120.1680.3516Yes
86Rasa254180.1670.3550Yes
87Wasl56720.1550.3457No
88Kif3b57500.1520.3452No
89Nck158520.1470.3434No
90Sorbs258570.1470.3465No
91Kif2c60600.1370.3393No
92Pcm160980.1360.3405No
93Sun261620.1330.3403No
94Arhgdia63310.1260.3346No
95Clasp165840.1170.3245No
96Arfgef165930.1160.3267No
97Arfip266390.1150.3270No
98Bcr66970.1120.3266No
99Arf667270.1110.3276No
100Sac3d167340.1110.3297No
101Abi168220.1080.3278No
102Cdc4270400.0980.3190No
103Dlgap571040.0950.3179No
104Taok271100.0950.3198No
105Net171230.0950.3213No
106Mid172210.0910.3184No
107Capzb72820.0890.3174No
108Rfc174350.0820.3116No
109Lats176710.0710.3013No
110Cntrob78380.0640.2943No
111Rab3gap178430.0640.2956No
112Clip278730.0630.2955No
113Palld80020.0580.2903No
114Espl180180.0570.2908No
115Dlg180220.0570.2919No
116Csnk1d81870.0490.2848No
117Wasf282360.0470.2834No
118Sass683530.0420.2784No
119Arhgef1184850.0370.2727No
120Dst85020.0360.2727No
121Apc85130.0360.2729No
122Gemin485970.0310.2695No
123Sos186710.0280.2664No
124Pxn87680.0230.2621No
125Dock287890.0220.2616No
126Tiam188230.0200.2603No
127Kifap389010.0170.2568No
128Rapgef692090.0030.2414No
129Kif1b92590.0010.2390No
130Map3k119352-0.0010.2344No
131Rock19373-0.0020.2334No
132Ophn19378-0.0020.2333No
133Smc49397-0.0030.2324No
134Cdc42bpa9463-0.0060.2293No
135Abr9686-0.0160.2184No
136Flnb9938-0.0250.2063No
137Tubgcp210031-0.0300.2023No
138Cttn10042-0.0300.2025No
139Akap1310054-0.0310.2026No
140Gsn10186-0.0370.1969No
141Arhgef310476-0.0490.1834No
142Myo9b10502-0.0500.1832No
143Prex110882-0.0660.1656No
144Ccnb211121-0.0740.1552No
145Rictor11254-0.0790.1503No
146Brca211313-0.0820.1492No
147Cenpj11470-0.0890.1433No
148Arhgap2711489-0.0890.1444No
149Myh1011573-0.0920.1423No
150Cep5711676-0.0980.1393No
151Ralbp111858-0.1060.1325No
152Arhgap1011926-0.1090.1316No
153Fbxo512052-0.1150.1278No
154Arhgap412273-0.1230.1194No
155Rabgap112329-0.1250.1194No
156Katnb112485-0.1330.1146No
157Nusap112710-0.1440.1065No
158Bcl2l1112711-0.1440.1097No
159Hdac612936-0.1540.1018No
160Rapgef513105-0.1610.0969No
161Synpo13109-0.1610.1004No
162Kif3c13249-0.1670.0971No
163Septin913398-0.1750.0935No
164Llgl113411-0.1750.0968No
165Wasf113555-0.1820.0936No
166Als213567-0.1830.0971No
167Tbcd13590-0.1840.1001No
168Ssh213704-0.1890.0986No
169Plekhg213899-0.1970.0932No
170Dock413902-0.1970.0975No
171Tubgcp513907-0.1970.1017No
172Rasal214299-0.2180.0868No
173Itsn114513-0.2290.0811No
174Katna114588-0.2310.0825No
175Nedd914716-0.2390.0814No
176Map1s15135-0.2580.0661No
177Trio15192-0.2610.0691No
178Arhgap2915266-0.2650.0713No
179Mid1ip115413-0.2720.0700No
180Clip115444-0.2740.0746No
181Atg4b16371-0.3260.0351No
182Uxt16564-0.3360.0329No
183Pcgf516606-0.3390.0384No
184Cd2ap16842-0.3550.0344No
185Nf117308-0.3850.0195No
186Cep13117661-0.4120.0109No
187Tuba4a17770-0.4230.0149No
188Ccdc88a18043-0.4470.0111No
189Cdc42ep418653-0.510-0.0083No
190Rhof18955-0.552-0.0112No
191Bin118985-0.559-0.0002No
192Shroom219010-0.5620.0111No
193Marcks19032-0.5660.0226No
194Pkd219230-0.6020.0261No
195Shroom119348-0.6310.0342No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_MITOTIC_SPINDLE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_MITOTIC_SPINDLE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_MITOTIC_SPINDLE