DatasetGMP.GMP.neu_Pheno.cls
#Group2_versus_Group3.GMP.neu_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.neu_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)0.30679446
Normalized Enrichment Score (NES)1.1393313
Nominal p-value0.2896406
FDR q-value0.6554238
FWER p-Value0.929
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Parp14440.8590.0340Yes
2Ogfr1900.6690.0550Yes
3Csf12220.6550.0811Yes
4Rsad22370.6480.1077Yes
5Ifitm33150.6120.1297Yes
6Mov105320.5510.1421Yes
7Lap37950.4930.1498Yes
8Irf98720.4830.1664Yes
9Ifit39740.4680.1810Yes
10Parp129910.4660.1999Yes
11Cd7410300.4610.2175Yes
12Plscr111190.4480.2320Yes
13Trim2511790.4430.2477Yes
14Ifitm112500.4340.2625Yes
15Ube2l617410.3860.2542Yes
16Dhx5818370.3780.2654Yes
17Psma321770.3510.2632Yes
18Cmpk226800.3130.2512Yes
19Cmtr127840.3050.2590Yes
20Gbp328280.3030.2696Yes
21Il4ra28830.2980.2795Yes
22Cxcl1029470.2950.2887Yes
23Casp130430.2900.2962Yes
24Bst232650.2760.2968Yes
25Helz235470.2610.2937Yes
26Ifih138440.2450.2892Yes
27Samd9l39070.2410.2962Yes
28Nub139890.2380.3022Yes
29Mx240950.2330.3068Yes
30Eif2ak244230.2140.2994No
31Tdrd746230.2050.2981No
32Wars155120.1620.2604No
33Mvb12a58330.1480.2506No
34Pnpt158560.1470.2557No
35Elf159910.1410.2549No
36Tmem14060000.1400.2604No
37Oas1a60230.1390.2652No
38Trafd161340.1340.2653No
39Slc25a2861630.1330.2696No
40Ifit261680.1330.2750No
41Irf163210.1270.2727No
42Ifi3063570.1250.2763No
43Adar65520.1180.2715No
44Ifitm268750.1060.2598No
45Parp969040.1050.2629No
46Oasl170430.0980.2601No
47Ifi4470980.0960.2614No
48Isg2074430.0810.2476No
49Rnf3178400.0640.2304No
50Cd4779640.0590.2267No
51Cnp79690.0590.2290No
52Sell80160.0570.2291No
53Psme186160.0300.2003No
54Irf286490.0290.1999No
55Gmpr90280.0110.1815No
56Isg159411-0.0030.1624No
57Trim219482-0.0070.1592No
58Ifi279887-0.0230.1399No
59Ripk29910-0.0240.1398No
60Procr10095-0.0320.1320No
61Trim1410101-0.0330.1331No
62Il710114-0.0330.1339No
63Trim12c10338-0.0440.1246No
64Irf710483-0.0490.1194No
65Herc610655-0.0560.1132No
66Tap110753-0.0600.1109No
67Epsti111461-0.0880.0791No
68Tent5a11882-0.1070.0626No
69Ddx6012012-0.1130.0609No
70Uba712492-0.1340.0425No
71B2m13120-0.1610.0178No
72Lgals3bp14764-0.242-0.0544No
73Ncoa714826-0.245-0.0471No
74Psme214859-0.246-0.0383No
75Casp814939-0.250-0.0317No
76Usp1815102-0.257-0.0290No
77Sp11015132-0.258-0.0196No
78Txnip15223-0.262-0.0130No
79Ly6e15256-0.264-0.0034No
80Psmb815653-0.286-0.0112No
81Psmb916779-0.350-0.0529No
82Stat217467-0.397-0.0706No
83Nmi17470-0.397-0.0540No
84Batf217893-0.433-0.0569No
85Ccrl218774-0.527-0.0788No
86Ifi3518937-0.550-0.0637No
87Il1519338-0.628-0.0572No
88Trim2619432-0.649-0.0345No
89Rtp419623-0.713-0.0139No
90Lpar619792-0.8080.0117No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE