DatasetGMP.GMP.neu_Pheno.cls
#Group2_versus_Group3.GMP.neu_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.neu_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_ESTROGEN_RESPONSE_EARLY
Enrichment Score (ES)-0.24543357
Normalized Enrichment Score (NES)-1.05125
Nominal p-value0.3597561
FDR q-value1.0
FWER p-Value0.977
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_ESTROGEN_RESPONSE_EARLY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Myof61.1060.0260No
2Asb131300.7130.0367No
3Rrp122680.6340.0448No
4Klf44510.5730.0492No
5Bhlhe404820.5650.0611No
6Unc1197560.4990.0593No
7Dhrs37880.4940.0694No
8Frk8770.4830.0764No
9Xbp18830.4820.0876No
10Mybbp1a9640.4700.0948No
11Arl310460.4590.1016No
12Podxl15290.4040.0869No
13Hr17240.3880.0864No
14Isg20l218600.3760.0885No
15Amfr19860.3670.0909No
16Muc121950.3500.0887No
17Gja122800.3420.0926No
18Med2424230.3310.0933No
19Fkbp424280.3300.1010No
20Il6st25240.3220.1038No
21Slc26a228170.3040.0964No
22Farp128760.2990.1005No
23Elovl528970.2970.1066No
24Tiparp29800.2930.1094No
25Fkbp531360.2830.1083No
26Akap132280.2780.1103No
27Slc1a133070.2740.1129No
28Mapt33440.2720.1175No
29Gla35990.2580.1109No
30Wwc137220.2520.1107No
31Jak238610.2440.1096No
32Elovl239750.2390.1095No
33Abca343490.2180.0959No
34Fos48720.1910.0742No
35Sec14l249620.1890.0742No
36Mindy150000.1870.0768No
37Cbfa2t352640.1740.0677No
38B4galt152750.1740.0713No
39Med13l53910.1690.0695No
40Dhcr754760.1640.0692No
41Plaat354910.1630.0723No
42Rara55090.1620.0753No
43Slc16a155450.1610.0774No
44Slc22a555820.1600.0794No
45Fdft159020.1450.0668No
46Elf159910.1410.0657No
47Slc7a560260.1390.0673No
48Snx2461310.1350.0652No
49Adcy961440.1340.0678No
50Tgif261490.1340.0708No
51Slc37a162700.1290.0678No
52Abhd263550.1250.0665No
53Ttc39a63700.1240.0688No
54Kazn65740.1170.0614No
55Rhod68280.1080.0512No
56Slc7a270310.0990.0433No
57Gfra170850.0970.0430No
58Car1271390.0940.0425No
59Gab273390.0860.0346No
60Slc19a273940.0840.0338No
61Fasn74720.0800.0319No
62P2ry275020.0780.0323No
63Slc1a477060.0690.0237No
64Aldh3b177540.0680.0229No
65Clic377670.0680.0239No
66Zfp18579510.0590.0161No
67Abat79760.0580.0163No
68Sema3b80590.0550.0135No
69Mreg81730.0500.0090No
70Tmem16483310.0420.0021No
71Sybu85790.032-0.0096No
72Ptges85830.032-0.0090No
73Endod186050.031-0.0093No
74Anxa987150.025-0.0142No
75Tiam188230.020-0.0191No
76Tjp388300.020-0.0189No
77Inpp5f88690.018-0.0204No
78Rab3188760.018-0.0203No
79Papss292360.002-0.0383No
80Mpped29389-0.003-0.0459No
81Rab179428-0.004-0.0477No
82Aff19437-0.005-0.0480No
83Sfn9523-0.009-0.0520No
84Scarb19656-0.015-0.0583No
85Cyp26b19713-0.018-0.0607No
86Svil9781-0.020-0.0636No
87Flnb9938-0.025-0.0709No
88Bag110161-0.036-0.0812No
89Itpk110222-0.038-0.0833No
90Klf1010375-0.045-0.0899No
91Greb110474-0.049-0.0937No
92Rbbp810478-0.049-0.0927No
93Opn310525-0.051-0.0938No
94Tmprss310572-0.053-0.0948No
95Pmaip110901-0.067-0.1098No
96Olfm111063-0.071-0.1162No
97Ugcg11183-0.076-0.1203No
98Pgr11256-0.079-0.1221No
99Slc39a611346-0.083-0.1246No
100Cant111349-0.083-0.1227No
101Stc211462-0.088-0.1263No
102Celsr111619-0.095-0.1319No
103Fhl211747-0.100-0.1359No
104Igfbp412084-0.116-0.1500No
105Dlc112331-0.125-0.1595No
106Nav212385-0.128-0.1591No
107Wfs112500-0.134-0.1616No
108Blvrb12615-0.139-0.1641No
109Igf1r12666-0.142-0.1632No
110Chpt112679-0.143-0.1604No
111Add312911-0.153-0.1684No
112Slc2a113459-0.178-0.1917No
113Ncor213472-0.178-0.1881No
114Tpd52l113897-0.197-0.2048No
115Rps6ka213964-0.200-0.2033No
116Kcnk513965-0.200-0.1986No
117Bcl11b14125-0.208-0.2017No
118Scnn1a14633-0.234-0.2216No
119Rasgrp114806-0.244-0.2245No
120Cd4414858-0.246-0.2212No
121Pex11a15091-0.257-0.2268No
122Mybl115295-0.266-0.2307No
123Lrig115427-0.273-0.2308No
124Tbc1d3015433-0.273-0.2246No
125Myb15460-0.275-0.2194No
126Slc27a215906-0.301-0.2346No
127Cish16122-0.314-0.2380Yes
128Kdm4b16260-0.320-0.2373Yes
129Calb216330-0.324-0.2331Yes
130Dynlt316495-0.332-0.2334Yes
131Retreg116529-0.334-0.2272Yes
132Tgm216879-0.357-0.2363Yes
133Nxt116908-0.358-0.2292Yes
134Nadsyn117035-0.366-0.2268Yes
135Siah217187-0.377-0.2255Yes
136Myc17216-0.379-0.2179Yes
137Ar17295-0.384-0.2127Yes
138Rapgefl117486-0.398-0.2128Yes
139Thsd417814-0.427-0.2191Yes
140Il17rb17852-0.430-0.2108Yes
141Deptor18218-0.463-0.2182Yes
142Rhobtb318237-0.465-0.2081Yes
143Mlph18317-0.473-0.2008Yes
144Tob118354-0.477-0.1913Yes
145Slc24a318486-0.491-0.1862Yes
146Pdzk118634-0.508-0.1816Yes
147Sh3bp518647-0.509-0.1701Yes
148Sult2b118838-0.538-0.1669Yes
149Mast418881-0.542-0.1562Yes
150Olfml319156-0.588-0.1560Yes
151Bcl219197-0.596-0.1439Yes
152Krt819260-0.609-0.1325Yes
153Ablim119490-0.668-0.1282Yes
154Nrip119594-0.702-0.1168Yes
155Krt1819612-0.710-0.1007Yes
156Ppif19721-0.755-0.0883Yes
157Celsr219924-0.925-0.0765Yes
158Ccnd119976-1.022-0.0548Yes
159Syngr119990-1.096-0.0294Yes
160Reep120015-1.3150.0006Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_ESTROGEN_RESPONSE_EARLY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_ESTROGEN_RESPONSE_EARLY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_ESTROGEN_RESPONSE_EARLY