Details for gene set HALLMARK_CHOLESTEROL

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group2_versus_Group3.GMP.neu_Pheno.cls #Group2_versus_Group3_repos
Phenotype	GMP.neu_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_CHOLESTEROL_HOMEOSTASIS
Enrichment Score (ES)	-0.2734806
Normalized Enrichment Score (NES)	-0.98592806
Nominal p-value	0.4627451
FDR q-value	0.80292505
FWER p-Value	0.989

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Clu	284	0.628	0.0244	No
2	Actg1	457	0.570	0.0508	No
3	Tmem97	553	0.545	0.0796	No
4	Ctnnb1	558	0.544	0.1128	No
5	Antxr2	916	0.477	0.1243	No
6	Plscr1	1119	0.448	0.1417	No
7	Fabp5	1462	0.410	0.1498	No
8	Hsd17b7	2267	0.343	0.1307	No
9	Cpeb2	3147	0.282	0.1039	No
10	Gnai1	3383	0.270	0.1087	No
11	Sqle	4310	0.220	0.0759	No
12	Lgmn	5160	0.179	0.0444	No
13	Hmgcs1	5427	0.167	0.0413	No
14	Dhcr7	5476	0.164	0.0490	No
15	Trp53inp1	5567	0.160	0.0543	No
16	Stx5a	5668	0.156	0.0589	No
17	Ech1	5763	0.151	0.0634	No
18	Fdft1	5902	0.145	0.0654	No
19	Tm7sf2	5905	0.145	0.0742	No
20	Fasn	7472	0.080	0.0007	No
21	Idi1	7805	0.066	-0.0119	No
22	Gusb	7863	0.063	-0.0109	No
23	Pmvk	8015	0.057	-0.0150	No
24	Sema3b	8059	0.055	-0.0137	No
25	Atf5	8116	0.053	-0.0133	No
26	Ldlr	8219	0.048	-0.0155	No
27	Fads2	8223	0.047	-0.0127	No
28	Cyp51	8414	0.039	-0.0198	No
29	Atf3	8529	0.035	-0.0234	No
30	Stard4	8613	0.030	-0.0257	No
31	Nfil3	8897	0.017	-0.0388	No
32	Chka	8900	0.017	-0.0379	No
33	Anxa5	9469	-0.006	-0.0659	No
34	Atxn2	9709	-0.017	-0.0768	No
35	Pdk3	9832	-0.022	-0.0816	No
36	Plaur	9953	-0.026	-0.0860	No
37	Tnfrsf12a	10602	-0.054	-0.1151	No
38	Ethe1	11003	-0.071	-0.1308	No
39	Hmgcr	11442	-0.087	-0.1474	No
40	Fdps	11988	-0.112	-0.1679	No
41	Lgals3	12123	-0.118	-0.1673	No
42	Mvk	13005	-0.157	-0.2018	No
43	Acss2	13351	-0.172	-0.2085	No
44	Trib3	14357	-0.221	-0.2453	No
45	Aldoc	14502	-0.228	-0.2384	No
46	Sc5d	15014	-0.253	-0.2485	No
47	Pcyt2	15514	-0.278	-0.2564	Yes
48	Niban1	15739	-0.291	-0.2497	Yes
49	Nsdhl	15813	-0.295	-0.2352	Yes
50	Gstm7	15832	-0.296	-0.2179	Yes
51	Gldc	15914	-0.301	-0.2035	Yes
52	Ebp	15945	-0.303	-0.1863	Yes
53	Lpl	16030	-0.308	-0.1716	Yes
54	Cd9	16206	-0.318	-0.1608	Yes
55	Lss	16265	-0.321	-0.1440	Yes
56	Srebf2	16542	-0.335	-0.1372	Yes
57	Acat2	16740	-0.347	-0.1258	Yes
58	Abca2	16950	-0.360	-0.1141	Yes
59	S100a11	17469	-0.397	-0.1156	Yes
60	Jag1	17542	-0.402	-0.0945	Yes
61	Alcam	17860	-0.430	-0.0839	Yes
62	Errfi1	17961	-0.440	-0.0619	Yes
63	Pparg	18626	-0.507	-0.0640	Yes
64	Mvd	18784	-0.529	-0.0394	Yes
65	Pnrc1	19401	-0.644	-0.0307	Yes
66	Fbxo6	19971	-1.008	0.0028	Yes