DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group4.GMP.neu_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_PI3K_AKT_MTOR_SIGNALING
Enrichment Score (ES)-0.18535395
Normalized Enrichment Score (NES)-1.0047024
Nominal p-value0.46361747
FDR q-value0.706786
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Adcy21610.8290.0314No
2Egfr7130.5880.0318No
3Traf212170.5000.0304No
4Cltc15410.4470.0355No
5Akt115560.4450.0560No
6Pten19410.4100.0563No
7Myd8820680.3980.0689No
8Actr225190.3620.0636No
9Prkcb34440.2920.0312No
10Atf135360.2860.0402No
11Ralb38130.2710.0393No
12Them443360.2420.0246No
13Cdk143500.2410.0354No
14Akt1s147160.2240.0277No
15Pin149230.2200.0279No
16Cab3949800.2160.0353No
17Smad249850.2150.0454No
18Itpr250680.2110.0513No
19Ppp2r1b51980.2030.0545No
20Tsc253360.1950.0569No
21Sfn57400.1730.0450No
22Plcg158800.1660.0459No
23Hsp90b160220.1590.0464No
24Ptpn1163300.1500.0381No
25Actr364090.1470.0412No
26Raf164800.1450.0446No
27Rps6ka166370.1370.0433No
28Pla2g12a66590.1360.0488No
29Ap2m167520.1310.0504No
30Tiam168080.1280.0537No
31Tnfrsf1a68640.1270.0570No
32Grb270550.1180.0531No
33Calr72120.1120.0506No
34Arf174150.1030.0454No
35Hras74610.1010.0480No
36Prkar2a74660.1010.0526No
37Mapk875560.0980.0528No
38Rptor75610.0980.0572No
39Pikfyve77460.0880.0522No
40Ywhab79710.0790.0447No
41Mknk280810.0750.0428No
42Eif4e83350.0640.0332No
43Slc2a184550.0590.0300No
44Mapk185170.0560.0296No
45Mapkap187790.0460.0187No
46Map2k390390.0360.0074No
47Trib393280.024-0.0059No
48Mapk999460.002-0.0367No
49Pak410191-0.001-0.0489No
50Pdk110624-0.018-0.0697No
51Grk210647-0.019-0.0699No
52Map3k710683-0.020-0.0707No
53Vav310863-0.026-0.0785No
54Irak410900-0.027-0.0790No
55Gsk3b11257-0.043-0.0948No
56Arpc311444-0.050-0.1017No
57Ripk111715-0.061-0.1124No
58Nck111852-0.067-0.1160No
59Mknk111977-0.071-0.1189No
60Map2k612640-0.099-0.1474No
61Nod112776-0.104-0.1492No
62Camk412834-0.106-0.1470No
63Lck12912-0.109-0.1457No
64Sla13133-0.116-0.1512No
65Nfkbib13194-0.118-0.1486No
66Ube2d313258-0.121-0.1460No
67Gna1413547-0.131-0.1542No
68Sqstm113713-0.138-0.1559No
69Acaca14038-0.153-0.1648No
70Prkag114339-0.166-0.1720No
71Fgf2214607-0.179-0.1768Yes
72Rac114656-0.181-0.1706Yes
73Csnk2b14823-0.189-0.1699Yes
74Pfn114996-0.199-0.1691Yes
75Mapk1015291-0.211-0.1738Yes
76Ube2n15362-0.212-0.1672Yes
77Plcb115424-0.216-0.1599Yes
78Dusp315579-0.222-0.1571Yes
79Rps6ka315596-0.222-0.1473Yes
80E2f115992-0.243-0.1555Yes
81Arhgdia16207-0.257-0.1540Yes
82Tbk116241-0.259-0.1433Yes
83Stat216256-0.260-0.1317Yes
84Cab39l16313-0.264-0.1219Yes
85Cdk216642-0.279-0.1251Yes
86Cdkn1b16691-0.283-0.1140Yes
87Cdk416993-0.301-0.1148Yes
88Rit117224-0.313-0.1114Yes
89Prkaa217303-0.317-0.1002Yes
90Ppp1ca17787-0.351-0.1077Yes
91Il418061-0.372-0.1037Yes
92Cxcr418324-0.396-0.0980Yes
93Ecsit18526-0.412-0.0884Yes
94Pik3r318684-0.427-0.0760Yes
95Il2rg19358-0.537-0.0841Yes
96Ddit319416-0.550-0.0608Yes
97Cfl119462-0.563-0.0362Yes
98Cdkn1a19559-0.586-0.0131Yes
99Dapp119900-0.7660.0063Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PI3K_AKT_MTOR_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PI3K_AKT_MTOR_SIGNALING