Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group4.GMP.neu_Pheno.cls #Group1_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	-0.26221654
Normalized Enrichment Score (NES)	-1.1237478
Nominal p-value	0.2776618
FDR q-value	0.96207565
FWER p-Value	0.961

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tchh	115	0.899	0.0155	No
2	Klf4	201	0.806	0.0304	No
3	H2ac25	269	0.770	0.0452	No
4	Stom	666	0.597	0.0394	No
5	Jun	723	0.587	0.0505	No
6	Ldhb	944	0.536	0.0521	No
7	Jag2	985	0.526	0.0626	No
8	Ada	1054	0.517	0.0714	No
9	Dcxr	1952	0.408	0.0359	No
10	Cdh13	2333	0.377	0.0257	No
11	Itgb4	2363	0.373	0.0331	No
12	Alox8	2411	0.370	0.0395	No
13	Cd82	2529	0.361	0.0421	No
14	Aen	2530	0.361	0.0507	No
15	Abcc5	2639	0.352	0.0536	No
16	Txnip	3094	0.320	0.0383	No
17	Btg2	3254	0.306	0.0376	No
18	Sdc1	3349	0.299	0.0399	No
19	Rgs16	3354	0.298	0.0468	No
20	Ralgds	3363	0.298	0.0535	No
21	Vdr	3776	0.273	0.0392	No
22	Foxo3	3816	0.270	0.0436	No
23	Rab40c	3853	0.268	0.0482	No
24	Hmox1	3950	0.265	0.0496	No
25	Ppp1r15a	3971	0.264	0.0549	No
26	Mdm2	3978	0.263	0.0608	No
27	Cyfip2	4162	0.253	0.0576	No
28	Nudt15	4294	0.245	0.0568	No
29	Rrp8	4357	0.240	0.0593	No
30	Cd81	4888	0.221	0.0379	No
31	Pmm1	5230	0.200	0.0254	No
32	Trafd1	5238	0.200	0.0298	No
33	Rrad	5257	0.199	0.0336	No
34	Hspa4l	5279	0.199	0.0373	No
35	Tap1	5342	0.195	0.0388	No
36	F2r	5669	0.177	0.0265	No
37	Ctsd	5705	0.175	0.0289	No
38	Sfn	5740	0.173	0.0313	No
39	Tgfa	5829	0.169	0.0309	No
40	Ccp110	5839	0.168	0.0344	No
41	H1f2	5861	0.168	0.0373	No
42	Polh	6078	0.156	0.0302	No
43	Fam162a	6401	0.148	0.0174	No
44	Prmt2	6584	0.140	0.0116	No
45	Plk2	6740	0.132	0.0069	No
46	Def6	6916	0.125	0.0010	No
47	Klk8	7054	0.118	-0.0031	No
48	Abhd4	7059	0.118	-0.0005	No
49	Slc3a2	7213	0.112	-0.0055	No
50	Rad9a	7290	0.108	-0.0068	No
51	Hdac3	7330	0.107	-0.0062	No
52	Fdxr	7369	0.105	-0.0057	No
53	Hras	7461	0.101	-0.0078	No
54	Coq8a	7504	0.100	-0.0076	No
55	Tob1	7527	0.099	-0.0064	No
56	Elp1	7538	0.099	-0.0045	No
57	Ifi30	7595	0.096	-0.0051	No
58	Tpd52l1	7618	0.095	-0.0039	No
59	Rhbdf2	7725	0.089	-0.0072	No
60	Wwp1	7845	0.084	-0.0112	No
61	Prkab1	7927	0.081	-0.0133	No
62	Fuca1	7955	0.080	-0.0128	No
63	Hexim1	8004	0.078	-0.0134	No
64	Mknk2	8081	0.075	-0.0154	No
65	Ccng1	8203	0.069	-0.0199	No
66	Sp1	8238	0.068	-0.0200	No
67	Baiap2	8242	0.068	-0.0186	No
68	Slc7a11	8282	0.066	-0.0189	No
69	Tax1bp3	8337	0.064	-0.0201	No
70	Fbxw7	8635	0.050	-0.0339	No
71	Fos	8800	0.045	-0.0411	No
72	Ccnd2	8888	0.043	-0.0445	No
73	Ip6k2	8937	0.040	-0.0459	No
74	Nupr1	9045	0.036	-0.0505	No
75	Ercc5	9133	0.032	-0.0541	No
76	App	9156	0.032	-0.0545	No
77	Xpc	9161	0.031	-0.0539	No
78	Bax	9274	0.026	-0.0589	No
79	Trib3	9328	0.024	-0.0610	No
80	Slc35d1	9370	0.023	-0.0625	No
81	Apaf1	9545	0.017	-0.0709	No
82	Fas	9736	0.010	-0.0802	No
83	Notch1	9781	0.008	-0.0823	No
84	Osgin1	9817	0.007	-0.0839	No
85	Zfp36l1	9906	0.004	-0.0882	No
86	Ddb2	10177	-0.001	-0.1018	No
87	Rps12	10441	-0.011	-0.1148	No
88	Kif13b	10542	-0.014	-0.1195	No
89	Rnf19b	10947	-0.030	-0.1392	No
90	Rap2b	10955	-0.030	-0.1388	No
91	Sphk1	10991	-0.032	-0.1398	No
92	Ier5	11094	-0.036	-0.1441	No
93	Ei24	11104	-0.037	-0.1437	No
94	Triap1	11111	-0.037	-0.1431	No
95	Fgf13	11185	-0.040	-0.1459	No
96	Ccnk	11277	-0.044	-0.1494	No
97	Ppm1d	11473	-0.051	-0.1580	No
98	Tprkb	11563	-0.055	-0.1612	No
99	Pdgfa	11611	-0.057	-0.1622	No
100	Mapkapk3	11629	-0.057	-0.1617	No
101	Tm7sf3	11682	-0.059	-0.1630	No
102	Hbegf	11840	-0.066	-0.1693	No
103	Abat	11927	-0.069	-0.1720	No
104	Mxd4	11941	-0.070	-0.1710	No
105	Pvt1	12218	-0.081	-0.1830	No
106	Irag2	12390	-0.088	-0.1895	No
107	Pcna	12454	-0.091	-0.1905	No
108	Pom121	12485	-0.092	-0.1899	No
109	Rb1	12775	-0.104	-0.2019	No
110	Bak1	13033	-0.114	-0.2122	No
111	Socs1	13349	-0.124	-0.2251	No
112	Zbtb16	13462	-0.128	-0.2277	No
113	Perp	13634	-0.135	-0.2331	No
114	Cdkn2aip	13692	-0.137	-0.2328	No
115	Gadd45a	13913	-0.148	-0.2403	No
116	Ddit4	14348	-0.167	-0.2583	Yes
117	Atf3	14386	-0.168	-0.2561	Yes
118	Sesn1	14494	-0.174	-0.2574	Yes
119	Eps8l2	14532	-0.175	-0.2551	Yes
120	Sat1	14557	-0.176	-0.2521	Yes
121	St14	14667	-0.182	-0.2533	Yes
122	Nol8	14670	-0.182	-0.2491	Yes
123	Iscu	14762	-0.186	-0.2493	Yes
124	Ninj1	14837	-0.190	-0.2485	Yes
125	Ptpn14	14858	-0.191	-0.2450	Yes
126	Rpl18	14975	-0.198	-0.2461	Yes
127	Retsat	15007	-0.199	-0.2430	Yes
128	Rps27l	15022	-0.200	-0.2389	Yes
129	Cdk5r1	15035	-0.200	-0.2348	Yes
130	Zmat3	15251	-0.211	-0.2406	Yes
131	S100a4	15254	-0.211	-0.2357	Yes
132	Dnttip2	15366	-0.213	-0.2363	Yes
133	Csrnp2	15428	-0.216	-0.2342	Yes
134	Rack1	15576	-0.222	-0.2364	Yes
135	H2aj	15651	-0.225	-0.2348	Yes
136	Rpl36	15717	-0.228	-0.2326	Yes
137	Trp53	15777	-0.230	-0.2301	Yes
138	Dgka	15781	-0.231	-0.2248	Yes
139	Ptpre	15820	-0.233	-0.2212	Yes
140	Pidd1	15924	-0.238	-0.2207	Yes
141	Tnfsf9	16049	-0.247	-0.2211	Yes
142	S100a10	16092	-0.250	-0.2173	Yes
143	Pitpnc1	16119	-0.251	-0.2127	Yes
144	Rchy1	16231	-0.259	-0.2122	Yes
145	Rxra	16238	-0.259	-0.2063	Yes
146	Hint1	16245	-0.259	-0.2005	Yes
147	Tsc22d1	16455	-0.271	-0.2046	Yes
148	Ctsf	16776	-0.288	-0.2139	Yes
149	Steap3	16813	-0.289	-0.2089	Yes
150	Mxd1	17073	-0.304	-0.2147	Yes
151	Vwa5a	17135	-0.308	-0.2105	Yes
152	Ankra2	17296	-0.317	-0.2110	Yes
153	Btg1	17353	-0.319	-0.2063	Yes
154	Tspyl2	17446	-0.326	-0.2032	Yes
155	Ndrg1	17530	-0.330	-0.1995	Yes
156	Blcap	17537	-0.331	-0.1920	Yes
157	Irak1	17573	-0.333	-0.1859	Yes
158	Dram1	17780	-0.350	-0.1879	Yes
159	Tgfb1	17835	-0.355	-0.1823	Yes
160	Casp1	18054	-0.371	-0.1844	Yes
161	Sertad3	18093	-0.375	-0.1775	Yes
162	Rad51c	18183	-0.384	-0.1728	Yes
163	Sec61a1	18203	-0.385	-0.1647	Yes
164	Cebpa	18320	-0.396	-0.1611	Yes
165	Vamp8	18362	-0.400	-0.1537	Yes
166	Ccnd3	18452	-0.406	-0.1486	Yes
167	Acvr1b	18709	-0.430	-0.1513	Yes
168	Wrap73	18845	-0.451	-0.1474	Yes
169	Plxnb2	18897	-0.458	-0.1391	Yes
170	Slc19a2	19057	-0.478	-0.1358	Yes
171	Tcn2	19079	-0.481	-0.1254	Yes
172	Ak1	19199	-0.504	-0.1195	Yes
173	Traf4	19311	-0.528	-0.1126	Yes
174	Plk3	19350	-0.536	-0.1018	Yes
175	Procr	19391	-0.543	-0.0909	Yes
176	Ddit3	19416	-0.550	-0.0791	Yes
177	Cgrrf1	19438	-0.558	-0.0669	Yes
178	Gm2a	19529	-0.579	-0.0577	Yes
179	Cdkn1a	19559	-0.586	-0.0453	Yes
180	Ephx1	19571	-0.589	-0.0319	Yes
181	Ier3	19821	-0.685	-0.0282	Yes
182	Trp63	19890	-0.748	-0.0139	Yes
183	Gls2	19969	-0.873	0.0029	Yes